Links
Eichler Lab Public Databases
Software
PARASIGHT
Multiple Alignment Manipulator (MaM)
mrFAST: micro-read Fast Alignment Search Tool
mrsFAST: micro-read substitution-only Fast Alignment Search Tool
drFAST: dibase-read Fast Alignment Search Tool
VariationHunter: Tool for Structural Variation Detection using Next-Gen Sequencing
NovelSeq: Tool for Novel Sequence Detection using Next-Gen Sequencing
SPLITREAD: Detection of structural variants and indels from genome and exome sequencing data
SCALCE: Tool to efficiently compress FASTQ files
Collaborators
SFU Lab for Computational Biology
Primate Genomics Lab, Institut de Biologia Evolutiva, Barcelona, Spain
The Genome Institute at Washington University, St. Louis, MO, USA
Center for Human Genome Variation, Duke University School of Medicine, Durham, NC, USA
Department of Biochemistry & Molecular Biology, Pennsylvania State, University Park, PA, USA
State Lab, Yale School of Medicine, New Haven, CT, USA
Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
Polleux Lab, The Scripps Research Institute, La Jolla, CA, USA
Consortium Projects
1000 Genomes Project
Epi4K Project
Genome Reference Consortium
Structural Variation Project
Rhesus Genome Sequencing Project
Marmoset Genome Sequencing Project
Chimpanzee Genome Sequencing Project
Great Ape Genome Project (mirror)