Basic Statistics
Measure | Value |
---|---|
Filename | CHM13_CA_ChIP_1_trimmed_R2_q20_val_2.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 53838306 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGCAGACTTTACAAACAGAGTGTTTCCTAACTGCTCTATGAAAAGAAAGG | 82401 | 0.15305273535166578 | No Hit |
AGACAGAATGATTCTCAGAAACTCCTTTGTGATGTGTGCGTTCAACTCAC | 81553 | 0.15147764864667176 | No Hit |
AGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTGT | 68289 | 0.12684091509119919 | No Hit |
TGCAAATTCCACAAAAAGAGTGTTTCAAGTCTGCTCTGTGTAAAGGATCG | 55843 | 0.10372354583370436 | No Hit |
AGGGAAATATCTTCAAATAAAAACCAGACAGAATCATTCTCAGAAAATTC | 54104 | 0.10049350364032628 | No Hit |