FastQCFastQC Report
Tue 24 Nov 2020
CHM13_Input_2_trimmed_R1_q20.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenameCHM13_Input_2_trimmed_R1_q20.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50371585
Sequences flagged as poor quality0
Sequence length100-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)