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Building DAG of jobs...
Your conda installation is not configured to use strict channel priorities. This is however crucial for having robust and correct environments (for details, see https://conda-forge.org/docs/user/tipsandtricks.html). Please consider to configure strict priorities by executing 'conda config --set channel_priority strict'.
Using shell: /usr/bin/bash
Provided cores: 1 (use --cores to define parallelism)
Rules claiming more threads will be scaled down.
Provided resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954
Select jobs to execute...

[Sat Jul 13 08:23:07 2024]
rule cluster_cens:
    input: workflow/scripts/cluster_cens.py, results/cluster_cens/bed/chr19_AS-HOR_liveHORs.all.bed, results/hor_stv/plots/chr19_small
    output: results/cluster_cens/chr19_cen_clusters.png, results/cluster_cens/chr19_cen_clusters.json
    log: logs/cluster_cens/cluster_cens_chr19.log
    jobid: 0
    reason: Forced execution
    wildcards: chr=chr19
    resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=/tmp/2312674.1.eichler-short.q


        python workflow/scripts/cluster_cens.py         -i results/cluster_cens/bed/chr19_AS-HOR_liveHORs.all.bed         -p results/cluster_cens/chr19_cen_clusters.png         -d results/hor_stv/plots/chr19_small         --output_clusters results/cluster_cens/chr19_cen_clusters.json         --linkage_method average 2> logs/cluster_cens/cluster_cens_chr19.log
        
Activating conda environment: .snakemake/conda/9faaf425d0fe5a7384238809e90b5c40_
[Sat Jul 13 08:23:15 2024]
Finished job 0.
1 of 1 steps (100%) done