Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/utils.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/utils.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Multiple includes of /net/eichler/vol28/projects/platinum_genomes/nobackups/glennis/cenmap_G1_verkko/workflow/rules/common.smk ignored
Building DAG of jobs...
Your conda installation is not configured to use strict channel priorities. This is however crucial for having robust and correct environments (for details, see https://conda-forge.org/docs/user/tipsandtricks.html). Please consider to configure strict priorities by executing 'conda config --set channel_priority strict'.
Using shell: /usr/bin/bash
Provided cores: 1 (use --cores to define parallelism)
Rules claiming more threads will be scaled down.
Provided resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, mem=4
Select jobs to execute...

[Fri Jul  5 18:25:38 2024]
rule run_moddotplot:
    input: results/humas_hmmer/cens/NA12892_chr8_haplotype2-0000110:42900660-46724708.fa
    output: results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708_FULL.png, results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708_FULL.pdf, results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708_HIST.png, results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708_HIST.pdf, results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708_TRI.png, results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708_TRI.pdf, results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708/NA12892_chr8_haplotype2-0000110:42900660-46724708.bed
    log: logs/moddotplot/moddotplot_NA12892_chr8_haplotype2-0000110:42900660-46724708.log
    jobid: 0
    benchmark: benchmarks/moddotplot/moddotplot_NA12892_chr8_haplotype2-0000110:42900660-46724708.tsv
    reason: Forced execution
    wildcards: fname=NA12892_chr8_haplotype2-0000110:42900660-46724708
    resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=/tmp/2080547.1.eichler-short.q, mem=4


        moddotplot static -f results/humas_hmmer/cens/NA12892_chr8_haplotype2-0000110:42900660-46724708.fa -w 5000 -o results/moddotplot/original_NA12892_chr8_haplotype2-0000110:42900660-46724708 -id 70.0 &> logs/moddotplot/moddotplot_NA12892_chr8_haplotype2-0000110:42900660-46724708.log
        
Activating conda environment: .snakemake/conda/e98badf745ef48ef68d4e7b8ab2b8885_
[Fri Jul  5 18:27:01 2024]
Finished job 0.
1 of 1 steps (100%) done