******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.0.5 (Release date: Mon Mar 18 20:12:19 2019 -0700) For further information on how to interpret please access http://meme-suite.org/. To get a copy of the MEME software please access http://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= simple_chm13_v1.0.intra_1.sd_flank.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:24283-24302 1.0000 20 chr1:26445-26464 1.0000 20 chr1:12399495-12399514 1.0000 20 chr1:12561514-12561533 1.0000 20 chr1:12571513-12571532 1.0000 20 chr1:12573587-12573606 1.0000 20 chr1:12573881-12573900 1.0000 20 chr1:12576034-12576053 1.0000 20 chr1:12589529-12589548 1.0000 20 chr1:12591642-12591661 1.0000 20 chr1:12591909-12591928 1.0000 20 chr1:12639836-12639858 1.0000 23 chr1:12663105-12663124 1.0000 20 chr1:12791177-12791196 1.0000 20 chr1:16129952-16129971 1.0000 20 chr1:16156546-16156565 1.0000 20 chr1:16168905-16168924 1.0000 20 chr1:16173618-16173637 1.0000 20 chr1:16214536-16214555 1.0000 20 chr1:16361339-16361358 1.0000 20 chr1:16385317-16385336 1.0000 20 chr1:16402877-16402896 1.0000 20 chr1:16439576-16439595 1.0000 20 chr1:16483233-16483252 1.0000 20 chr1:16656620-16656639 1.0000 20 chr1:103533116-103533135 1.0000 20 chr1:103557683-103557702 1.0000 20 chr1:103572578-103572597 1.0000 20 chr1:103581663-103581685 1.0000 23 chr1:103586482-103586501 1.0000 20 chr1:103611044-103611066 1.0000 23 chr1:103616489-103616508 1.0000 20 chr1:103627264-103627283 1.0000 20 chr1:103651827-103651846 1.0000 20 chr1:103656644-103656666 1.0000 23 chr1:103665732-103665751 1.0000 20 chr1:103680615-103680634 1.0000 20 chr1:103705179-103705198 1.0000 20 chr1:108255411-108255430 1.0000 20 chr1:108281662-108281681 1.0000 20 chr1:108356151-108356170 1.0000 20 chr1:108479873-108479892 1.0000 20 chr1:126865478-126865497 1.0000 20 chr1:126871617-126871636 1.0000 20 chr1:126884029-126884048 1.0000 20 chr1:126884063-126884082 1.0000 20 chr1:126891744-126891763 1.0000 20 chr1:126892657-126892676 1.0000 20 chr1:126899479-126899498 1.0000 20 chr1:126919265-126919284 1.0000 20 chr1:127715231-127715250 1.0000 20 chr1:127766676-127766695 1.0000 20 chr1:127888877-127888896 1.0000 20 chr1:127938788-127938807 1.0000 20 chr1:128735083-128735102 1.0000 20 chr1:128774783-128774802 1.0000 20 chr1:128783762-128783781 1.0000 20 chr1:128807220-128807239 1.0000 20 chr1:128814926-128814945 1.0000 20 chr1:128815841-128815860 1.0000 20 chr1:128822657-128822676 1.0000 20 chr1:128833692-128833711 1.0000 20 chr1:128841286-128841305 1.0000 20 chr1:128848056-128848075 1.0000 20 chr1:128860309-128860328 1.0000 20 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chr1:145720824-145720843 1.0000 20 chr1:145762002-145762021 1.0000 20 chr1:145828295-145828314 1.0000 20 chr1:160735608-160735627 1.0000 20 chr1:160880564-160880583 1.0000 20 chr1:160962362-160962381 1.0000 20 chr1:161022719-161022738 1.0000 20 chr2:89127360-89127379 1.0000 20 chr2:89417200-89417220 1.0000 21 chr2:89422052-89422091 1.0000 40 chr2:89432117-89432136 1.0000 20 chr2:89438430-89438449 1.0000 20 chr2:89438469-89438488 1.0000 20 chr2:89486113-89486132 1.0000 20 chr2:89515232-89515260 1.0000 29 chr2:89593169-89593188 1.0000 20 chr2:89593482-89593501 1.0000 20 chr2:89593526-89593545 1.0000 20 chr2:89683047-89683066 1.0000 20 chr2:89704881-89704900 1.0000 20 chr2:89789718-89789737 1.0000 20 chr2:89795800-89795819 1.0000 20 chr2:89807689-89807708 1.0000 20 chr2:89811512-89811531 1.0000 20 chr2:89841333-89841364 1.0000 32 chr2:89859895-89859915 1.0000 21 chr2:89889869-89889888 1.0000 20 chr2:89905578-89905597 1.0000 20 chr2:89911658-89911677 1.0000 20 chr2:90036522-90036541 1.0000 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chr22:10373074-10373093 1.0000 20 chr22:10384377-10384396 1.0000 20 chr22:10438688-10438707 1.0000 20 chr22:10452581-10452620 1.0000 40 chr22:10453285-10453329 1.0000 45 chr22:10458615-10458634 1.0000 20 chr22:10474024-10474043 1.0000 20 chr22:10525076-10525095 1.0000 20 chr22:10528538-10528557 1.0000 20 chr22:10552695-10552714 1.0000 20 chr22:10562207-10562226 1.0000 20 chr22:10563172-10563191 1.0000 20 chr22:10571574-10571593 1.0000 20 chr22:10592673-10592692 1.0000 20 chr22:10606843-10606862 1.0000 20 chr22:10613495-10613518 1.0000 24 chr22:10646298-10646317 1.0000 20 chr22:10652563-10652582 1.0000 20 chr22:10687877-10687897 1.0000 21 chr22:10689494-10689513 1.0000 20 chr22:10693925-10693958 1.0000 34 chr22:10701609-10701628 1.0000 20 chr22:10703812-10703831 1.0000 20 chr22:10711670-10711689 1.0000 20 chr22:10742150-10742169 1.0000 20 chr22:10745554-10745573 1.0000 20 chr22:10746056-10746075 1.0000 20 chr22:11075430-11075449 1.0000 20 chr22:11119217-11119236 1.0000 20 chr22:11144157-11144176 1.0000 20 chr22:11184806-11184836 1.0000 31 chr22:11185194-11185213 1.0000 20 chr22:11187506-11187525 1.0000 20 chr22:11197287-11197307 1.0000 21 chr22:11208599-11208618 1.0000 20 chr22:11208653-11208672 1.0000 20 chr22:11263564-11263583 1.0000 20 chr22:11279472-11279491 1.0000 20 chr22:11287203-11287232 1.0000 30 chr22:11290051-11290070 1.0000 20 chr22:11309935-11309969 1.0000 35 chr22:11311925-11311944 1.0000 20 chr22:11311974-11311993 1.0000 20 chr22:11381967-11381986 1.0000 20 chr22:11446070-11446089 1.0000 20 chr22:11463865-11463887 1.0000 23 chr22:11476049-11476070 1.0000 22 chr22:11484507-11484526 1.0000 20 chr22:11563172-11563191 1.0000 20 chr22:11576661-11576681 1.0000 21 chr22:11581841-11581860 1.0000 20 chr22:11581934-11581953 1.0000 20 chr22:11584757-11584776 1.0000 20 chr22:11590545-11590564 1.0000 20 chr22:11607069-11607088 1.0000 20 chr22:12190591-12190610 1.0000 20 chr22:12194336-12194355 1.0000 20 chr22:12222423-12222442 1.0000 20 chr22:12312595-12312614 1.0000 20 chr22:12313996-12314015 1.0000 20 chr22:12318963-12318982 1.0000 20 chr22:12325041-12325060 1.0000 20 chr22:12326831-12326852 1.0000 22 chr22:12347271-12347290 1.0000 20 chr22:12356029-12356048 1.0000 20 chr22:12363312-12363331 1.0000 20 chr22:12371646-12371665 1.0000 20 chr22:12447993-12448012 1.0000 20 chr22:12679886-12679905 1.0000 20 chr22:12694303-12694322 1.0000 20 chr22:12699431-12699450 1.0000 20 chr22:12793922-12793942 1.0000 21 chr22:16949030-16949049 1.0000 20 chr22:16957151-16957170 1.0000 20 chr22:16961131-16961164 1.0000 34 chr22:16979548-16979567 1.0000 20 chr22:16984686-16984705 1.0000 20 chr22:16992412-16992431 1.0000 20 chr22:17005700-17005719 1.0000 20 chr22:18874882-18874901 1.0000 20 chr22:18936398-18936417 1.0000 20 chr22:18936448-18936467 1.0000 20 chr22:18965270-18965289 1.0000 20 chr22:18979679-18979698 1.0000 20 chr22:19066281-19066300 1.0000 20 chr22:19068549-19068568 1.0000 20 chr22:19070332-19070351 1.0000 20 chr22:19106750-19106769 1.0000 20 chr22:19126137-19126156 1.0000 20 chr22:19131995-19132014 1.0000 20 chr22:19161956-19161975 1.0000 20 chr22:19163907-19163926 1.0000 20 chr22:19299614-19299633 1.0000 20 chr22:24428451-24428470 1.0000 20 chr22:24480338-24480357 1.0000 20 chrX:48712555-48712576 1.0000 22 chrX:48728366-48728385 1.0000 20 chrX:48730928-48730947 1.0000 20 chrX:48740452-48740471 1.0000 20 chrX:48769026-48769045 1.0000 20 chrX:48776005-48776024 1.0000 20 chrX:48794062-48794081 1.0000 20 chrX:48804550-48804569 1.0000 20 chrX:48813082-48813101 1.0000 20 chrX:48845966-48845985 1.0000 20 chrX:48852197-48852216 1.0000 20 chrX:48857204-48857223 1.0000 20 chrX:48861724-48861743 1.0000 20 chrX:48865012-48865031 1.0000 20 chrX:48882772-48882791 1.0000 20 chrX:48895347-48895366 1.0000 20 chrX:48912668-48912687 1.0000 20 chrX:48921948-48921967 1.0000 20 chrX:71162388-71162407 1.0000 20 chrX:71168662-71168681 1.0000 20 chrX:71424453-71424472 1.0000 20 chrX:71424824-71424843 1.0000 20 chrX:102436535-102436554 1.0000 20 chrX:102481840-102481859 1.0000 20 chrX:102510836-102510855 1.0000 20 chrX:151372857-151372876 1.0000 20 chrX:151417272-151417291 1.0000 20 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -dna -revcomp -p 80 -nmotifs 15 -minsites 50 -brief 100000 -oc simple_chm13_intra simple_chm13_v1.0.intra_1.sd_flank.fasta model: mod= zoops nmotifs= 15 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + - width: minw= 8 maxw= 50 nsites: minsites= 50 maxsites= 2595 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 54681 N= 2595 sample: seed= 0 hsfrac= 0 searchsize= 54681 norand= no csites= 1000 Letter frequencies in dataset: A 0.277 C 0.223 G 0.223 T 0.277 Background letter frequencies (from file dataset with add-one prior applied): A 0.277 C 0.223 G 0.223 T 0.277 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GGGTCAGGGAGAGGG MEME-1 width = 15 sites = 160 llr = 2975 E-value = 4.2e-291 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1::::a:::a:a::: pos.-specific C ::::7:::::::::: probability G 99a:3:a9a:a:a9a matrix T :1:a:::1:::::1: bits 2.2 * * * * 1.9 * * * *** * 1.7 ** ** ***** * 1.5 **** ********** Relative 1.3 **** ********** Entropy 1.1 *************** (26.8 bits) 0.9 *************** 0.6 *************** 0.4 *************** 0.2 *************** 0.0 --------------- Multilevel GGGTCAGGGAGAGGG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr22:9824917-9824936 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:7607115-7607134 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:7600952-7600971 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:7594785-7594804 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4125628-4125647 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4118963-4118982 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4112507-4112526 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4105904-4105923 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4099305-4099324 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4092704-4092723 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4086250-4086269 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4079641-4079660 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4073040-4073059 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4066443-4066462 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4059846-4059865 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4053396-4053415 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4047067-4047086 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4040470-4040489 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4034020-4034039 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4027687-4027706 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4021080-4021099 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4014479-4014498 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4007878-4007897 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:4001277-4001296 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3994676-3994695 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3988075-3988094 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3981482-3981501 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3974889-3974908 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3968295-3968314 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3961681-3961700 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3955064-3955083 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3948473-3948492 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3941864-3941883 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3935259-3935278 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3928654-3928673 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3921987-3922006 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3915386-3915405 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3908777-3908796 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3902181-3902200 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3895568-3895587 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3889252-3889271 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3882939-3882958 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3876336-3876355 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3869733-3869752 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3863416-3863435 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3856809-3856828 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:3850637-3850656 + 1 3.99e-10 . gggtcagggagaggg tttga chr22:220416-220436 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:214119-214139 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:207833-207853 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:201389-201409 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:194954-194974 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:188519-188539 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:182075-182095 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:175631-175651 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:169343-169363 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:162311-162331 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:156027-156047 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:149592-149612 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:143310-143330 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:136881-136901 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:130433-130453 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:124145-124165 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:117698-117718 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:111267-111287 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:104985-105005 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:98542-98562 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:92260-92280 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:85829-85849 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:79555-79575 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr22:73108-73128 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:2362241-2362260 + 1 3.99e-10 . gggtcagggagaggg tttga chr21:2355520-2355539 + 1 3.99e-10 . gggtcagggagaggg tttga chr21:2349058-2349077 + 1 3.99e-10 . gggtcagggagaggg tttga chr21:215220-215240 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:208221-208240 - 6 3.99e-10 . GGGTCAGGGAGAGGG TTTGA chr21:199361-199381 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:192225-192245 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:185085-185105 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:177945-177965 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:170797-170817 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:163357-163377 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:156065-156085 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:148625-148645 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:141333-141353 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:134044-134064 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:126611-126631 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:119175-119195 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:111739-111759 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:104303-104323 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:96805-96825 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr21:90473-90493 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr15:1906278-1906297 + 1 3.99e-10 . gggtcagggagaggg tttga chr15:1880359-1880378 + 1 3.99e-10 . gggtcagggagaggg tttga chr14:221440-221488 - 35 3.99e-10 . GGGTCAGGGAGAGGG TTTGAGACAG chr14:215177-215197 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr14:183779-183799 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr14:177478-177498 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr14:171178-171198 - 7 3.99e-10 . GGGTCAGGGAGAGGG TTTGAG chr14:164862-164910 - 35 3.99e-10 . GGGTCAGGGAGAGGG TTTGAGACAG chr13:5348797-5348816 + 1 3.99e-10 . gggtcagggagaggg tttga chr13:5342479-5342498 + 1 3.99e-10 . gggtcagggagaggg tttga chr3:95767201-95767220 + 1 3.99e-10 . gggtcagggagaggg tttga chr3:95760594-95760613 + 1 3.99e-10 . gggtcagggagaggg tttga chr14:202628-202648 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:196352-196372 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:190064-190084 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:158595-158615 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:146046-146066 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:139770-139790 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:133482-133502 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:127209-127229 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:120931-120951 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:114652-114672 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:108373-108393 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:102094-102114 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:95814-95834 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:89534-89554 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:83254-83274 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:76966-76986 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:70686-70706 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:64406-64426 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:58128-58148 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:51848-51868 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:45568-45588 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:39288-39308 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:33008-33028 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:26728-26748 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:20440-20460 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:14160-14180 - 7 7.99e-10 . GGGTGAGGGAGAGGG TTTGAG chr14:208902-208924 - 9 8.29e-09 . GGGTGAGAGAGAGGG TTTGAGAC chr14:152320-152342 - 9 8.29e-09 . GGGTGAGAGAGAGGG TTTGAGAC chr14:4088147-4088167 - 7 1.97e-08 . GGGTCAGGAAGAGGG TTTGAG chr22:10701609-10701628 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr22:10563172-10563191 + 4 1.80e-07 cct atgtgagtgaGAGTG CC chr22:7677110-7677129 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr22:7512746-7512765 + 4 1.80e-07 cct atgtgagtgaGAGTG CC chr22:5857597-5857616 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr22:3747507-3747526 + 4 1.80e-07 cct atgtgagtgaGAGTG CC chr21:8377125-8377144 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr21:6457644-6457663 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr21:2245823-2245842 + 4 1.80e-07 cct atgtgagtgaGAGTG CC chr15:5430318-5430337 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr14:5900354-5900378 - 8 1.80e-07 CCT ATGTGAGTGAGAGTG CCTGGAG chr14:5761993-5762017 + 4 1.80e-07 cct atgtgagtgaGAGTG CCTGGAG chr14:4004478-4004499 + 4 1.80e-07 cct atgtgagtgaGAGTG CCTG chr14:3014769-3014793 - 8 1.80e-07 CCT ATGTGAGTGAGAGTG CCTGGAG chr14:1566422-1566443 + 4 1.80e-07 cct atgtgagtgaGAGTG CCTG chr13:11186117-11186136 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr13:10158473-10158492 - 3 1.80e-07 CCT ATGTGAGTGAGAGTG CC chr13:5265546-5265565 + 4 1.80e-07 cct atgtgagtgaGAGTG CC chr18:164044-164063 - 2 3.36e-07 GTTA GGGTTAGGGTTAGGG T chr18:56007-56026 - 2 3.36e-07 GTTA GGGTTAGGGTTAGGG T chr18:1510-1529 - 2 3.36e-07 GTTA GGGTTAGGGTTAGGG T chr18:495-526 - 14 3.36e-07 GTTA GGGTTAGGGTTAGGG TTAGGGGGTT chr13:10020223-10020242 + 5 4.70e-07 AGAC GGGGgagagagagag a chr13:9880125-9880144 + 5 4.70e-07 AGAC GGGGgagagagagag a chr13:9833772-9833791 + 5 4.70e-07 AGAC GGGGgagagagagag a chr9:48361487-48361506 - 1 1.15e-06 AGGAG GAGGGAGGCAGAGGG chr13:10028212-10028231 - 6 1.44e-06 . GCATCGGGGAGAGGG TTTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:9824917-9824936 4e-10 [+1]_5 chr22:7607115-7607134 4e-10 [+1]_5 chr22:7600952-7600971 4e-10 [+1]_5 chr22:7594785-7594804 4e-10 [+1]_5 chr22:4125628-4125647 4e-10 [+1]_5 chr22:4118963-4118982 4e-10 [+1]_5 chr22:4112507-4112526 4e-10 [+1]_5 chr22:4105904-4105923 4e-10 [+1]_5 chr22:4099305-4099324 4e-10 [+1]_5 chr22:4092704-4092723 4e-10 [+1]_5 chr22:4086250-4086269 4e-10 [+1]_5 chr22:4079641-4079660 4e-10 [+1]_5 chr22:4073040-4073059 4e-10 [+1]_5 chr22:4066443-4066462 4e-10 [+1]_5 chr22:4059846-4059865 4e-10 [+1]_5 chr22:4053396-4053415 4e-10 [+1]_5 chr22:4047067-4047086 4e-10 [+1]_5 chr22:4040470-4040489 4e-10 [+1]_5 chr22:4034020-4034039 4e-10 [+1]_5 chr22:4027687-4027706 4e-10 [+1]_5 chr22:4021080-4021099 4e-10 [+1]_5 chr22:4014479-4014498 4e-10 [+1]_5 chr22:4007878-4007897 4e-10 [+1]_5 chr22:4001277-4001296 4e-10 [+1]_5 chr22:3994676-3994695 4e-10 [+1]_5 chr22:3988075-3988094 4e-10 [+1]_5 chr22:3981482-3981501 4e-10 [+1]_5 chr22:3974889-3974908 4e-10 [+1]_5 chr22:3968295-3968314 4e-10 [+1]_5 chr22:3961681-3961700 4e-10 [+1]_5 chr22:3955064-3955083 4e-10 [+1]_5 chr22:3948473-3948492 4e-10 [+1]_5 chr22:3941864-3941883 4e-10 [+1]_5 chr22:3935259-3935278 4e-10 [+1]_5 chr22:3928654-3928673 4e-10 [+1]_5 chr22:3921987-3922006 4e-10 [+1]_5 chr22:3915386-3915405 4e-10 [+1]_5 chr22:3908777-3908796 4e-10 [+1]_5 chr22:3902181-3902200 4e-10 [+1]_5 chr22:3895568-3895587 4e-10 [+1]_5 chr22:3889252-3889271 4e-10 [+1]_5 chr22:3882939-3882958 4e-10 [+1]_5 chr22:3876336-3876355 4e-10 [+1]_5 chr22:3869733-3869752 4e-10 [+1]_5 chr22:3863416-3863435 4e-10 [+1]_5 chr22:3856809-3856828 4e-10 [+1]_5 chr22:3850637-3850656 4e-10 [+1]_5 chr22:220416-220436 4e-10 6_[-1] chr22:214119-214139 4e-10 6_[-1] chr22:207833-207853 4e-10 6_[-1] chr22:201389-201409 4e-10 6_[-1] chr22:194954-194974 4e-10 6_[-1] chr22:188519-188539 4e-10 6_[-1] chr22:182075-182095 4e-10 6_[-1] chr22:175631-175651 4e-10 6_[-1] chr22:169343-169363 4e-10 6_[-1] chr22:162311-162331 4e-10 6_[-1] chr22:156027-156047 4e-10 6_[-1] chr22:149592-149612 4e-10 6_[-1] chr22:143310-143330 4e-10 6_[-1] chr22:136881-136901 4e-10 6_[-1] chr22:130433-130453 4e-10 6_[-1] chr22:124145-124165 4e-10 6_[-1] chr22:117698-117718 4e-10 6_[-1] chr22:111267-111287 4e-10 6_[-1] chr22:104985-105005 4e-10 6_[-1] chr22:98542-98562 4e-10 6_[-1] chr22:92260-92280 4e-10 6_[-1] chr22:85829-85849 4e-10 6_[-1] chr22:79555-79575 4e-10 6_[-1] chr22:73108-73128 4e-10 6_[-1] chr21:2362241-2362260 4e-10 [+1]_5 chr21:2355520-2355539 4e-10 [+1]_5 chr21:2349058-2349077 4e-10 [+1]_5 chr21:215220-215240 4e-10 6_[-1] chr21:208221-208240 4e-10 5_[-1] chr21:199361-199381 4e-10 6_[-1] chr21:192225-192245 4e-10 6_[-1] chr21:185085-185105 4e-10 6_[-1] chr21:177945-177965 4e-10 6_[-1] chr21:170797-170817 4e-10 6_[-1] chr21:163357-163377 4e-10 6_[-1] chr21:156065-156085 4e-10 6_[-1] chr21:148625-148645 4e-10 6_[-1] chr21:141333-141353 4e-10 6_[-1] chr21:134044-134064 4e-10 6_[-1] chr21:126611-126631 4e-10 6_[-1] chr21:119175-119195 4e-10 6_[-1] chr21:111739-111759 4e-10 6_[-1] chr21:104303-104323 4e-10 6_[-1] chr21:96805-96825 4e-10 6_[-1] chr21:90473-90493 4e-10 6_[-1] chr15:1906278-1906297 4e-10 [+1]_5 chr15:1880359-1880378 4e-10 [+1]_5 chr14:221440-221488 4e-10 34_[-1] chr14:215177-215197 4e-10 6_[-1] chr14:183779-183799 4e-10 6_[-1] chr14:177478-177498 4e-10 6_[-1] chr14:171178-171198 4e-10 6_[-1] chr14:164862-164910 4e-10 34_[-1] chr13:5348797-5348816 4e-10 [+1]_5 chr13:5342479-5342498 4e-10 [+1]_5 chr3:95767201-95767220 4e-10 [+1]_5 chr3:95760594-95760613 4e-10 [+1]_5 chr14:202628-202648 8e-10 6_[-1] chr14:196352-196372 8e-10 6_[-1] chr14:190064-190084 8e-10 6_[-1] chr14:158595-158615 8e-10 6_[-1] chr14:146046-146066 8e-10 6_[-1] chr14:139770-139790 8e-10 6_[-1] chr14:133482-133502 8e-10 6_[-1] chr14:127209-127229 8e-10 6_[-1] chr14:120931-120951 8e-10 6_[-1] chr14:114652-114672 8e-10 6_[-1] chr14:108373-108393 8e-10 6_[-1] chr14:102094-102114 8e-10 6_[-1] chr14:95814-95834 8e-10 6_[-1] chr14:89534-89554 8e-10 6_[-1] chr14:83254-83274 8e-10 6_[-1] chr14:76966-76986 8e-10 6_[-1] chr14:70686-70706 8e-10 6_[-1] chr14:64406-64426 8e-10 6_[-1] chr14:58128-58148 8e-10 6_[-1] chr14:51848-51868 8e-10 6_[-1] chr14:45568-45588 8e-10 6_[-1] chr14:39288-39308 8e-10 6_[-1] chr14:33008-33028 8e-10 6_[-1] chr14:26728-26748 8e-10 6_[-1] chr14:20440-20460 8e-10 6_[-1] chr14:14160-14180 8e-10 6_[-1] chr14:208902-208924 8.3e-09 8_[-1] chr14:152320-152342 8.3e-09 8_[-1] chr14:4088147-4088167 2e-08 6_[-1] chr22:10701609-10701628 1.8e-07 2_[-1]_3 chr22:10563172-10563191 1.8e-07 3_[+1]_2 chr22:7677110-7677129 1.8e-07 2_[-1]_3 chr22:7512746-7512765 1.8e-07 3_[+1]_2 chr22:5857597-5857616 1.8e-07 2_[-1]_3 chr22:3747507-3747526 1.8e-07 3_[+1]_2 chr21:8377125-8377144 1.8e-07 2_[-1]_3 chr21:6457644-6457663 1.8e-07 2_[-1]_3 chr21:2245823-2245842 1.8e-07 3_[+1]_2 chr15:5430318-5430337 1.8e-07 2_[-1]_3 chr14:5900354-5900378 1.8e-07 7_[-1]_3 chr14:5761993-5762017 1.8e-07 3_[+1]_7 chr14:4004478-4004499 1.8e-07 3_[+1]_4 chr14:3014769-3014793 1.8e-07 7_[-1]_3 chr14:1566422-1566443 1.8e-07 3_[+1]_4 chr13:11186117-11186136 1.8e-07 2_[-1]_3 chr13:10158473-10158492 1.8e-07 2_[-1]_3 chr13:5265546-5265565 1.8e-07 3_[+1]_2 chr18:164044-164063 3.4e-07 1_[-1]_4 chr18:56007-56026 3.4e-07 1_[-1]_4 chr18:1510-1529 3.4e-07 1_[-1]_4 chr18:495-526 3.4e-07 13_[-1]_4 chr13:10020223-10020242 4.7e-07 4_[+1]_1 chr13:9880125-9880144 4.7e-07 4_[+1]_1 chr13:9833772-9833791 4.7e-07 4_[+1]_1 chr9:48361487-48361506 1.2e-06 [-1]_5 chr13:10028212-10028231 1.4e-06 5_[-1] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGTCAGGGAGAGGG width=15 seqs=160 chr22:9824917-9824936 ( 1) GGGTCAGGGAGAGGG 1 chr22:7607115-7607134 ( 1) GGGTCAGGGAGAGGG 1 chr22:7600952-7600971 ( 1) GGGTCAGGGAGAGGG 1 chr22:7594785-7594804 ( 1) GGGTCAGGGAGAGGG 1 chr22:4125628-4125647 ( 1) GGGTCAGGGAGAGGG 1 chr22:4118963-4118982 ( 1) GGGTCAGGGAGAGGG 1 chr22:4112507-4112526 ( 1) GGGTCAGGGAGAGGG 1 chr22:4105904-4105923 ( 1) GGGTCAGGGAGAGGG 1 chr22:4099305-4099324 ( 1) GGGTCAGGGAGAGGG 1 chr22:4092704-4092723 ( 1) GGGTCAGGGAGAGGG 1 chr22:4086250-4086269 ( 1) GGGTCAGGGAGAGGG 1 chr22:4079641-4079660 ( 1) GGGTCAGGGAGAGGG 1 chr22:4073040-4073059 ( 1) GGGTCAGGGAGAGGG 1 chr22:4066443-4066462 ( 1) GGGTCAGGGAGAGGG 1 chr22:4059846-4059865 ( 1) GGGTCAGGGAGAGGG 1 chr22:4053396-4053415 ( 1) GGGTCAGGGAGAGGG 1 chr22:4047067-4047086 ( 1) GGGTCAGGGAGAGGG 1 chr22:4040470-4040489 ( 1) GGGTCAGGGAGAGGG 1 chr22:4034020-4034039 ( 1) GGGTCAGGGAGAGGG 1 chr22:4027687-4027706 ( 1) GGGTCAGGGAGAGGG 1 chr22:4021080-4021099 ( 1) GGGTCAGGGAGAGGG 1 chr22:4014479-4014498 ( 1) GGGTCAGGGAGAGGG 1 chr22:4007878-4007897 ( 1) GGGTCAGGGAGAGGG 1 chr22:4001277-4001296 ( 1) GGGTCAGGGAGAGGG 1 chr22:3994676-3994695 ( 1) GGGTCAGGGAGAGGG 1 chr22:3988075-3988094 ( 1) GGGTCAGGGAGAGGG 1 chr22:3981482-3981501 ( 1) GGGTCAGGGAGAGGG 1 chr22:3974889-3974908 ( 1) GGGTCAGGGAGAGGG 1 chr22:3968295-3968314 ( 1) GGGTCAGGGAGAGGG 1 chr22:3961681-3961700 ( 1) GGGTCAGGGAGAGGG 1 chr22:3955064-3955083 ( 1) GGGTCAGGGAGAGGG 1 chr22:3948473-3948492 ( 1) GGGTCAGGGAGAGGG 1 chr22:3941864-3941883 ( 1) GGGTCAGGGAGAGGG 1 chr22:3935259-3935278 ( 1) GGGTCAGGGAGAGGG 1 chr22:3928654-3928673 ( 1) GGGTCAGGGAGAGGG 1 chr22:3921987-3922006 ( 1) GGGTCAGGGAGAGGG 1 chr22:3915386-3915405 ( 1) GGGTCAGGGAGAGGG 1 chr22:3908777-3908796 ( 1) GGGTCAGGGAGAGGG 1 chr22:3902181-3902200 ( 1) GGGTCAGGGAGAGGG 1 chr22:3895568-3895587 ( 1) GGGTCAGGGAGAGGG 1 chr22:3889252-3889271 ( 1) GGGTCAGGGAGAGGG 1 chr22:3882939-3882958 ( 1) GGGTCAGGGAGAGGG 1 chr22:3876336-3876355 ( 1) GGGTCAGGGAGAGGG 1 chr22:3869733-3869752 ( 1) GGGTCAGGGAGAGGG 1 chr22:3863416-3863435 ( 1) GGGTCAGGGAGAGGG 1 chr22:3856809-3856828 ( 1) GGGTCAGGGAGAGGG 1 chr22:3850637-3850656 ( 1) GGGTCAGGGAGAGGG 1 chr22:220416-220436 ( 7) GGGTCAGGGAGAGGG 1 chr22:214119-214139 ( 7) GGGTCAGGGAGAGGG 1 chr22:207833-207853 ( 7) GGGTCAGGGAGAGGG 1 chr22:201389-201409 ( 7) GGGTCAGGGAGAGGG 1 chr22:194954-194974 ( 7) GGGTCAGGGAGAGGG 1 chr22:188519-188539 ( 7) GGGTCAGGGAGAGGG 1 chr22:182075-182095 ( 7) GGGTCAGGGAGAGGG 1 chr22:175631-175651 ( 7) GGGTCAGGGAGAGGG 1 chr22:169343-169363 ( 7) GGGTCAGGGAGAGGG 1 chr22:162311-162331 ( 7) GGGTCAGGGAGAGGG 1 chr22:156027-156047 ( 7) GGGTCAGGGAGAGGG 1 chr22:149592-149612 ( 7) GGGTCAGGGAGAGGG 1 chr22:143310-143330 ( 7) GGGTCAGGGAGAGGG 1 chr22:136881-136901 ( 7) GGGTCAGGGAGAGGG 1 chr22:130433-130453 ( 7) GGGTCAGGGAGAGGG 1 chr22:124145-124165 ( 7) GGGTCAGGGAGAGGG 1 chr22:117698-117718 ( 7) GGGTCAGGGAGAGGG 1 chr22:111267-111287 ( 7) GGGTCAGGGAGAGGG 1 chr22:104985-105005 ( 7) GGGTCAGGGAGAGGG 1 chr22:98542-98562 ( 7) GGGTCAGGGAGAGGG 1 chr22:92260-92280 ( 7) GGGTCAGGGAGAGGG 1 chr22:85829-85849 ( 7) GGGTCAGGGAGAGGG 1 chr22:79555-79575 ( 7) GGGTCAGGGAGAGGG 1 chr22:73108-73128 ( 7) GGGTCAGGGAGAGGG 1 chr21:2362241-2362260 ( 1) GGGTCAGGGAGAGGG 1 chr21:2355520-2355539 ( 1) GGGTCAGGGAGAGGG 1 chr21:2349058-2349077 ( 1) GGGTCAGGGAGAGGG 1 chr21:215220-215240 ( 7) GGGTCAGGGAGAGGG 1 chr21:208221-208240 ( 6) GGGTCAGGGAGAGGG 1 chr21:199361-199381 ( 7) GGGTCAGGGAGAGGG 1 chr21:192225-192245 ( 7) GGGTCAGGGAGAGGG 1 chr21:185085-185105 ( 7) GGGTCAGGGAGAGGG 1 chr21:177945-177965 ( 7) GGGTCAGGGAGAGGG 1 chr21:170797-170817 ( 7) GGGTCAGGGAGAGGG 1 chr21:163357-163377 ( 7) GGGTCAGGGAGAGGG 1 chr21:156065-156085 ( 7) GGGTCAGGGAGAGGG 1 chr21:148625-148645 ( 7) GGGTCAGGGAGAGGG 1 chr21:141333-141353 ( 7) GGGTCAGGGAGAGGG 1 chr21:134044-134064 ( 7) GGGTCAGGGAGAGGG 1 chr21:126611-126631 ( 7) GGGTCAGGGAGAGGG 1 chr21:119175-119195 ( 7) GGGTCAGGGAGAGGG 1 chr21:111739-111759 ( 7) GGGTCAGGGAGAGGG 1 chr21:104303-104323 ( 7) GGGTCAGGGAGAGGG 1 chr21:96805-96825 ( 7) GGGTCAGGGAGAGGG 1 chr21:90473-90493 ( 7) GGGTCAGGGAGAGGG 1 chr15:1906278-1906297 ( 1) GGGTCAGGGAGAGGG 1 chr15:1880359-1880378 ( 1) GGGTCAGGGAGAGGG 1 chr14:221440-221488 ( 35) GGGTCAGGGAGAGGG 1 chr14:215177-215197 ( 7) GGGTCAGGGAGAGGG 1 chr14:183779-183799 ( 7) GGGTCAGGGAGAGGG 1 chr14:177478-177498 ( 7) GGGTCAGGGAGAGGG 1 chr14:171178-171198 ( 7) GGGTCAGGGAGAGGG 1 chr14:164862-164910 ( 35) GGGTCAGGGAGAGGG 1 chr13:5348797-5348816 ( 1) GGGTCAGGGAGAGGG 1 chr13:5342479-5342498 ( 1) GGGTCAGGGAGAGGG 1 chr3:95767201-95767220 ( 1) GGGTCAGGGAGAGGG 1 chr3:95760594-95760613 ( 1) GGGTCAGGGAGAGGG 1 chr14:202628-202648 ( 7) GGGTGAGGGAGAGGG 1 chr14:196352-196372 ( 7) GGGTGAGGGAGAGGG 1 chr14:190064-190084 ( 7) GGGTGAGGGAGAGGG 1 chr14:158595-158615 ( 7) GGGTGAGGGAGAGGG 1 chr14:146046-146066 ( 7) GGGTGAGGGAGAGGG 1 chr14:139770-139790 ( 7) GGGTGAGGGAGAGGG 1 chr14:133482-133502 ( 7) GGGTGAGGGAGAGGG 1 chr14:127209-127229 ( 7) GGGTGAGGGAGAGGG 1 chr14:120931-120951 ( 7) GGGTGAGGGAGAGGG 1 chr14:114652-114672 ( 7) GGGTGAGGGAGAGGG 1 chr14:108373-108393 ( 7) GGGTGAGGGAGAGGG 1 chr14:102094-102114 ( 7) GGGTGAGGGAGAGGG 1 chr14:95814-95834 ( 7) GGGTGAGGGAGAGGG 1 chr14:89534-89554 ( 7) GGGTGAGGGAGAGGG 1 chr14:83254-83274 ( 7) GGGTGAGGGAGAGGG 1 chr14:76966-76986 ( 7) GGGTGAGGGAGAGGG 1 chr14:70686-70706 ( 7) GGGTGAGGGAGAGGG 1 chr14:64406-64426 ( 7) GGGTGAGGGAGAGGG 1 chr14:58128-58148 ( 7) GGGTGAGGGAGAGGG 1 chr14:51848-51868 ( 7) GGGTGAGGGAGAGGG 1 chr14:45568-45588 ( 7) GGGTGAGGGAGAGGG 1 chr14:39288-39308 ( 7) GGGTGAGGGAGAGGG 1 chr14:33008-33028 ( 7) GGGTGAGGGAGAGGG 1 chr14:26728-26748 ( 7) GGGTGAGGGAGAGGG 1 chr14:20440-20460 ( 7) GGGTGAGGGAGAGGG 1 chr14:14160-14180 ( 7) GGGTGAGGGAGAGGG 1 chr14:208902-208924 ( 9) GGGTGAGAGAGAGGG 1 chr14:152320-152342 ( 9) GGGTGAGAGAGAGGG 1 chr14:4088147-4088167 ( 7) GGGTCAGGAAGAGGG 1 chr22:10701609-10701628 ( 3) ATGTGAGTGAGAGTG 1 chr22:10563172-10563191 ( 4) ATGTGAGTGAGAGTG 1 chr22:7677110-7677129 ( 3) ATGTGAGTGAGAGTG 1 chr22:7512746-7512765 ( 4) ATGTGAGTGAGAGTG 1 chr22:5857597-5857616 ( 3) ATGTGAGTGAGAGTG 1 chr22:3747507-3747526 ( 4) ATGTGAGTGAGAGTG 1 chr21:8377125-8377144 ( 3) ATGTGAGTGAGAGTG 1 chr21:6457644-6457663 ( 3) ATGTGAGTGAGAGTG 1 chr21:2245823-2245842 ( 4) ATGTGAGTGAGAGTG 1 chr15:5430318-5430337 ( 3) ATGTGAGTGAGAGTG 1 chr14:5900354-5900378 ( 8) ATGTGAGTGAGAGTG 1 chr14:5761993-5762017 ( 4) ATGTGAGTGAGAGTG 1 chr14:4004478-4004499 ( 4) ATGTGAGTGAGAGTG 1 chr14:3014769-3014793 ( 8) ATGTGAGTGAGAGTG 1 chr14:1566422-1566443 ( 4) ATGTGAGTGAGAGTG 1 chr13:11186117-11186136 ( 3) ATGTGAGTGAGAGTG 1 chr13:10158473-10158492 ( 3) ATGTGAGTGAGAGTG 1 chr13:5265546-5265565 ( 4) ATGTGAGTGAGAGTG 1 chr18:164044-164063 ( 2) GGGTTAGGGTTAGGG 1 chr18:56007-56026 ( 2) GGGTTAGGGTTAGGG 1 chr18:1510-1529 ( 2) GGGTTAGGGTTAGGG 1 chr18:495-526 ( 14) GGGTTAGGGTTAGGG 1 chr13:10020223-10020242 ( 5) GGGGGAGAGAGAGAG 1 chr13:9880125-9880144 ( 5) GGGGGAGAGAGAGAG 1 chr13:9833772-9833791 ( 5) GGGGGAGAGAGAGAG 1 chr9:48361487-48361506 ( 1) GAGGGAGGCAGAGGG 1 chr13:10028212-10028231 ( 6) GCATCGGGGAGAGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 8.19305 E= 4.2e-291 -130 -1397 199 -1397 -547 -515 197 -130 -547 -1397 216 -1397 -1397 -1397 -315 181 -1397 157 49 -347 184 -1397 -515 -1397 -1397 -1397 217 -1397 -315 -1397 194 -130 -547 -515 215 -1397 181 -1397 -1397 -347 -1397 -1397 213 -347 185 -1397 -1397 -1397 -1397 -1397 217 -1397 -389 -1397 196 -130 -1397 -1397 217 -1397 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 160 E= 4.2e-291 0.112500 0.000000 0.887500 0.000000 0.006250 0.006250 0.875000 0.112500 0.006250 0.000000 0.993750 0.000000 0.000000 0.000000 0.025000 0.975000 0.000000 0.662500 0.312500 0.025000 0.993750 0.000000 0.006250 0.000000 0.000000 0.000000 1.000000 0.000000 0.031250 0.000000 0.856250 0.112500 0.006250 0.006250 0.987500 0.000000 0.975000 0.000000 0.000000 0.025000 0.000000 0.000000 0.975000 0.025000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.018750 0.000000 0.868750 0.112500 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTCAGGGAGAGGG MEME-1 regular expression -------------------------------------------------------------------------------- GGGT[CG]AGGGAGAGGG -------------------------------------------------------------------------------- Time 67.09 secs. ******************************************************************************** ******************************************************************************** MOTIF TGKGGGARKCTKACK MEME-2 width = 15 sites = 126 llr = 1875 E-value = 2.2e-137 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::::86:22:a:: pos.-specific C :::::::::8:::9: probability G 2a6aa8244::6::6 matrix T 8:4::2::6:84:14 bits 2.2 * ** 1.9 * ** * 1.7 * ** * 1.5 * ** ** Relative 1.3 ** *** * ** Entropy 1.1 *************** (21.5 bits) 0.9 *************** 0.6 *************** 0.4 *************** 0.2 *************** 0.0 --------------- Multilevel TGGGGGAATCTGACG consensus T GGG T T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr22:4119120-4119139 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4112664-4112683 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4106061-4106080 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4099462-4099481 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4092861-4092880 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4086407-4086426 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4079798-4079817 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4073197-4073216 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4066600-4066619 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4060003-4060022 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4053553-4053572 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4047224-4047243 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4040627-4040646 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4034177-4034196 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4027844-4027863 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4021237-4021256 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4014636-4014655 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4008035-4008054 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:4001434-4001453 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3994833-3994852 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3988232-3988251 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3981639-3981658 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3975046-3975065 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3968452-3968471 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3955221-3955240 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3948630-3948649 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3942021-3942040 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3935416-3935435 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3928811-3928830 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3922144-3922163 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3915543-3915562 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3908934-3908953 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3902338-3902357 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3895725-3895744 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3889409-3889428 + 3 2.37e-09 aa tgggggaatcttacg TGG chr22:3883096-3883115 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3876493-3876512 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr22:3869890-3869909 + 3 2.37e-09 aa tgggggaatCTTACG TGG chr21:2363553-2363572 + 1 4.18e-08 . tgtgggaggctgact cccgc chr21:2356832-2356851 + 1 4.18e-08 . tgtgggaggctgact cccgc chr21:2350370-2350389 + 1 4.18e-08 . tgtgggaggctgact cccgt chr21:2344088-2344107 + 1 4.18e-08 . tgtgggaggctgact cccgc chr21:220762-220781 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCTC chr21:125300-125319 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCTC chr21:95495-95514 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr21:89162-89181 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr21:82833-82852 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr21:76504-76523 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr21:70168-70187 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:4086836-4086855 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:213866-213885 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:207593-207612 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:201317-201336 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:195041-195060 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:188753-188772 - 6 4.18e-08 . TGTGGGAGGCTGACT GCTGC chr14:182468-182487 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:176167-176186 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:169867-169886 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:163579-163598 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:157284-157303 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:151011-151030 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:144735-144754 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:138459-138478 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:132171-132190 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:125898-125917 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:119620-119639 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:113341-113360 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:107062-107081 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:100783-100802 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:94503-94522 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:88223-88242 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:81943-81962 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:75655-75674 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:69375-69394 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:63095-63114 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:56817-56836 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:50537-50556 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:44257-44276 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:37977-37996 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:31697-31716 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:25417-25436 - 6 4.18e-08 . TGTGGGAGGCTGACT CCCGC chr14:19129-19148 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr14:12849-12868 - 6 4.18e-08 . TGTGGGAGGCTGACT GCCGC chr22:7607272-7607291 + 3 6.82e-08 aa tgggggaatcttatg TGG chr22:7601109-7601128 + 3 6.82e-08 aa tgggggaatcttatg TGG chr22:201233-201252 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:194798-194817 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:188363-188382 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:181919-181938 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:136725-136744 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:130277-130296 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:123989-124008 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:117542-117561 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:111111-111130 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:104829-104848 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:98386-98405 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:92104-92123 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:85673-85692 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:79399-79418 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr22:72952-72971 - 4 6.82e-08 AA TGGGGGAATCTTATG TGG chr21:110428-110447 - 6 1.41e-07 . TGTGGGGGGCTGACT CCCTC chr22:7613345-7613364 + 3 1.11e-06 tc gggggtgataagacg ttc chr22:4125691-4125710 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4119026-4119045 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4112570-4112589 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4092767-4092786 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4079704-4079723 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4066506-4066525 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4059909-4059928 + 3 1.11e-06 tc gggggtgataagacg ttt chr22:4053459-4053478 + 3 1.11e-06 tc gggggtgataagacg ttt chr21:2368998-2369017 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2056036-2056055 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2049346-2049365 + 3 1.11e-06 tc gggggtgataagacg ttc chr15:2042712-2042731 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2036130-2036149 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2029532-2029551 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2022950-2022969 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2016368-2016387 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2009786-2009805 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:2003204-2003223 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:1996582-1996601 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:1989990-1990009 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:1983404-1983423 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:1976809-1976828 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:1970498-1970517 + 3 1.11e-06 tc gggggtgataagacg ttt chr15:1964195-1964214 + 3 1.11e-06 tc gggggtgataagacg ttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:4119120-4119139 2.4e-09 2_[+2]_3 chr22:4112664-4112683 2.4e-09 2_[+2]_3 chr22:4106061-4106080 2.4e-09 2_[+2]_3 chr22:4099462-4099481 2.4e-09 2_[+2]_3 chr22:4092861-4092880 2.4e-09 2_[+2]_3 chr22:4086407-4086426 2.4e-09 2_[+2]_3 chr22:4079798-4079817 2.4e-09 2_[+2]_3 chr22:4073197-4073216 2.4e-09 2_[+2]_3 chr22:4066600-4066619 2.4e-09 2_[+2]_3 chr22:4060003-4060022 2.4e-09 2_[+2]_3 chr22:4053553-4053572 2.4e-09 2_[+2]_3 chr22:4047224-4047243 2.4e-09 2_[+2]_3 chr22:4040627-4040646 2.4e-09 2_[+2]_3 chr22:4034177-4034196 2.4e-09 2_[+2]_3 chr22:4027844-4027863 2.4e-09 2_[+2]_3 chr22:4021237-4021256 2.4e-09 2_[+2]_3 chr22:4014636-4014655 2.4e-09 2_[+2]_3 chr22:4008035-4008054 2.4e-09 2_[+2]_3 chr22:4001434-4001453 2.4e-09 2_[+2]_3 chr22:3994833-3994852 2.4e-09 2_[+2]_3 chr22:3988232-3988251 2.4e-09 2_[+2]_3 chr22:3981639-3981658 2.4e-09 2_[+2]_3 chr22:3975046-3975065 2.4e-09 2_[+2]_3 chr22:3968452-3968471 2.4e-09 2_[+2]_3 chr22:3955221-3955240 2.4e-09 2_[+2]_3 chr22:3948630-3948649 2.4e-09 2_[+2]_3 chr22:3942021-3942040 2.4e-09 2_[+2]_3 chr22:3935416-3935435 2.4e-09 2_[+2]_3 chr22:3928811-3928830 2.4e-09 2_[+2]_3 chr22:3922144-3922163 2.4e-09 2_[+2]_3 chr22:3915543-3915562 2.4e-09 2_[+2]_3 chr22:3908934-3908953 2.4e-09 2_[+2]_3 chr22:3902338-3902357 2.4e-09 2_[+2]_3 chr22:3895725-3895744 2.4e-09 2_[+2]_3 chr22:3889409-3889428 2.4e-09 2_[+2]_3 chr22:3883096-3883115 2.4e-09 2_[+2]_3 chr22:3876493-3876512 2.4e-09 2_[+2]_3 chr22:3869890-3869909 2.4e-09 2_[+2]_3 chr21:2363553-2363572 4.2e-08 [+2]_5 chr21:2356832-2356851 4.2e-08 [+2]_5 chr21:2350370-2350389 4.2e-08 [+2]_5 chr21:2344088-2344107 4.2e-08 [+2]_5 chr21:220762-220781 4.2e-08 5_[-2] chr21:125300-125319 4.2e-08 5_[-2] chr21:95495-95514 4.2e-08 5_[-2] chr21:89162-89181 4.2e-08 5_[-2] chr21:82833-82852 4.2e-08 5_[-2] chr21:76504-76523 4.2e-08 5_[-2] chr21:70168-70187 4.2e-08 5_[-2] chr14:4086836-4086855 4.2e-08 5_[-2] chr14:213866-213885 4.2e-08 5_[-2] chr14:207593-207612 4.2e-08 5_[-2] chr14:201317-201336 4.2e-08 5_[-2] chr14:195041-195060 4.2e-08 5_[-2] chr14:188753-188772 4.2e-08 5_[-2] chr14:182468-182487 4.2e-08 5_[-2] chr14:176167-176186 4.2e-08 5_[-2] chr14:169867-169886 4.2e-08 5_[-2] chr14:163579-163598 4.2e-08 5_[-2] chr14:157284-157303 4.2e-08 5_[-2] chr14:151011-151030 4.2e-08 5_[-2] chr14:144735-144754 4.2e-08 5_[-2] chr14:138459-138478 4.2e-08 5_[-2] chr14:132171-132190 4.2e-08 5_[-2] chr14:125898-125917 4.2e-08 5_[-2] chr14:119620-119639 4.2e-08 5_[-2] chr14:113341-113360 4.2e-08 5_[-2] chr14:107062-107081 4.2e-08 5_[-2] chr14:100783-100802 4.2e-08 5_[-2] chr14:94503-94522 4.2e-08 5_[-2] chr14:88223-88242 4.2e-08 5_[-2] chr14:81943-81962 4.2e-08 5_[-2] chr14:75655-75674 4.2e-08 5_[-2] chr14:69375-69394 4.2e-08 5_[-2] chr14:63095-63114 4.2e-08 5_[-2] chr14:56817-56836 4.2e-08 5_[-2] chr14:50537-50556 4.2e-08 5_[-2] chr14:44257-44276 4.2e-08 5_[-2] chr14:37977-37996 4.2e-08 5_[-2] chr14:31697-31716 4.2e-08 5_[-2] chr14:25417-25436 4.2e-08 5_[-2] chr14:19129-19148 4.2e-08 5_[-2] chr14:12849-12868 4.2e-08 5_[-2] chr22:7607272-7607291 6.8e-08 2_[+2]_3 chr22:7601109-7601128 6.8e-08 2_[+2]_3 chr22:201233-201252 6.8e-08 3_[-2]_2 chr22:194798-194817 6.8e-08 3_[-2]_2 chr22:188363-188382 6.8e-08 3_[-2]_2 chr22:181919-181938 6.8e-08 3_[-2]_2 chr22:136725-136744 6.8e-08 3_[-2]_2 chr22:130277-130296 6.8e-08 3_[-2]_2 chr22:123989-124008 6.8e-08 3_[-2]_2 chr22:117542-117561 6.8e-08 3_[-2]_2 chr22:111111-111130 6.8e-08 3_[-2]_2 chr22:104829-104848 6.8e-08 3_[-2]_2 chr22:98386-98405 6.8e-08 3_[-2]_2 chr22:92104-92123 6.8e-08 3_[-2]_2 chr22:85673-85692 6.8e-08 3_[-2]_2 chr22:79399-79418 6.8e-08 3_[-2]_2 chr22:72952-72971 6.8e-08 3_[-2]_2 chr21:110428-110447 1.4e-07 5_[-2] chr22:7613345-7613364 1.1e-06 2_[+2]_3 chr22:4125691-4125710 1.1e-06 2_[+2]_3 chr22:4119026-4119045 1.1e-06 2_[+2]_3 chr22:4112570-4112589 1.1e-06 2_[+2]_3 chr22:4092767-4092786 1.1e-06 2_[+2]_3 chr22:4079704-4079723 1.1e-06 2_[+2]_3 chr22:4066506-4066525 1.1e-06 2_[+2]_3 chr22:4059909-4059928 1.1e-06 2_[+2]_3 chr22:4053459-4053478 1.1e-06 2_[+2]_3 chr21:2368998-2369017 1.1e-06 2_[+2]_3 chr15:2056036-2056055 1.1e-06 2_[+2]_3 chr15:2049346-2049365 1.1e-06 2_[+2]_3 chr15:2042712-2042731 1.1e-06 2_[+2]_3 chr15:2036130-2036149 1.1e-06 2_[+2]_3 chr15:2029532-2029551 1.1e-06 2_[+2]_3 chr15:2022950-2022969 1.1e-06 2_[+2]_3 chr15:2016368-2016387 1.1e-06 2_[+2]_3 chr15:2009786-2009805 1.1e-06 2_[+2]_3 chr15:2003204-2003223 1.1e-06 2_[+2]_3 chr15:1996582-1996601 1.1e-06 2_[+2]_3 chr15:1989990-1990009 1.1e-06 2_[+2]_3 chr15:1983404-1983423 1.1e-06 2_[+2]_3 chr15:1976809-1976828 1.1e-06 2_[+2]_3 chr15:1970498-1970517 1.1e-06 2_[+2]_3 chr15:1964195-1964214 1.1e-06 2_[+2]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGKGGGARKCTKACK width=15 seqs=126 chr22:4119120-4119139 ( 3) TGGGGGAATCTTACG 1 chr22:4112664-4112683 ( 3) TGGGGGAATCTTACG 1 chr22:4106061-4106080 ( 3) TGGGGGAATCTTACG 1 chr22:4099462-4099481 ( 3) TGGGGGAATCTTACG 1 chr22:4092861-4092880 ( 3) TGGGGGAATCTTACG 1 chr22:4086407-4086426 ( 3) TGGGGGAATCTTACG 1 chr22:4079798-4079817 ( 3) TGGGGGAATCTTACG 1 chr22:4073197-4073216 ( 3) TGGGGGAATCTTACG 1 chr22:4066600-4066619 ( 3) TGGGGGAATCTTACG 1 chr22:4060003-4060022 ( 3) TGGGGGAATCTTACG 1 chr22:4053553-4053572 ( 3) TGGGGGAATCTTACG 1 chr22:4047224-4047243 ( 3) TGGGGGAATCTTACG 1 chr22:4040627-4040646 ( 3) TGGGGGAATCTTACG 1 chr22:4034177-4034196 ( 3) TGGGGGAATCTTACG 1 chr22:4027844-4027863 ( 3) TGGGGGAATCTTACG 1 chr22:4021237-4021256 ( 3) TGGGGGAATCTTACG 1 chr22:4014636-4014655 ( 3) TGGGGGAATCTTACG 1 chr22:4008035-4008054 ( 3) TGGGGGAATCTTACG 1 chr22:4001434-4001453 ( 3) TGGGGGAATCTTACG 1 chr22:3994833-3994852 ( 3) TGGGGGAATCTTACG 1 chr22:3988232-3988251 ( 3) TGGGGGAATCTTACG 1 chr22:3981639-3981658 ( 3) TGGGGGAATCTTACG 1 chr22:3975046-3975065 ( 3) TGGGGGAATCTTACG 1 chr22:3968452-3968471 ( 3) TGGGGGAATCTTACG 1 chr22:3955221-3955240 ( 3) TGGGGGAATCTTACG 1 chr22:3948630-3948649 ( 3) TGGGGGAATCTTACG 1 chr22:3942021-3942040 ( 3) TGGGGGAATCTTACG 1 chr22:3935416-3935435 ( 3) TGGGGGAATCTTACG 1 chr22:3928811-3928830 ( 3) TGGGGGAATCTTACG 1 chr22:3922144-3922163 ( 3) TGGGGGAATCTTACG 1 chr22:3915543-3915562 ( 3) TGGGGGAATCTTACG 1 chr22:3908934-3908953 ( 3) TGGGGGAATCTTACG 1 chr22:3902338-3902357 ( 3) TGGGGGAATCTTACG 1 chr22:3895725-3895744 ( 3) TGGGGGAATCTTACG 1 chr22:3889409-3889428 ( 3) TGGGGGAATCTTACG 1 chr22:3883096-3883115 ( 3) TGGGGGAATCTTACG 1 chr22:3876493-3876512 ( 3) TGGGGGAATCTTACG 1 chr22:3869890-3869909 ( 3) TGGGGGAATCTTACG 1 chr21:2363553-2363572 ( 1) TGTGGGAGGCTGACT 1 chr21:2356832-2356851 ( 1) TGTGGGAGGCTGACT 1 chr21:2350370-2350389 ( 1) TGTGGGAGGCTGACT 1 chr21:2344088-2344107 ( 1) TGTGGGAGGCTGACT 1 chr21:220762-220781 ( 6) TGTGGGAGGCTGACT 1 chr21:125300-125319 ( 6) TGTGGGAGGCTGACT 1 chr21:95495-95514 ( 6) TGTGGGAGGCTGACT 1 chr21:89162-89181 ( 6) TGTGGGAGGCTGACT 1 chr21:82833-82852 ( 6) TGTGGGAGGCTGACT 1 chr21:76504-76523 ( 6) TGTGGGAGGCTGACT 1 chr21:70168-70187 ( 6) TGTGGGAGGCTGACT 1 chr14:4086836-4086855 ( 6) TGTGGGAGGCTGACT 1 chr14:213866-213885 ( 6) TGTGGGAGGCTGACT 1 chr14:207593-207612 ( 6) TGTGGGAGGCTGACT 1 chr14:201317-201336 ( 6) TGTGGGAGGCTGACT 1 chr14:195041-195060 ( 6) TGTGGGAGGCTGACT 1 chr14:188753-188772 ( 6) TGTGGGAGGCTGACT 1 chr14:182468-182487 ( 6) TGTGGGAGGCTGACT 1 chr14:176167-176186 ( 6) TGTGGGAGGCTGACT 1 chr14:169867-169886 ( 6) TGTGGGAGGCTGACT 1 chr14:163579-163598 ( 6) TGTGGGAGGCTGACT 1 chr14:157284-157303 ( 6) TGTGGGAGGCTGACT 1 chr14:151011-151030 ( 6) TGTGGGAGGCTGACT 1 chr14:144735-144754 ( 6) TGTGGGAGGCTGACT 1 chr14:138459-138478 ( 6) TGTGGGAGGCTGACT 1 chr14:132171-132190 ( 6) TGTGGGAGGCTGACT 1 chr14:125898-125917 ( 6) TGTGGGAGGCTGACT 1 chr14:119620-119639 ( 6) TGTGGGAGGCTGACT 1 chr14:113341-113360 ( 6) TGTGGGAGGCTGACT 1 chr14:107062-107081 ( 6) TGTGGGAGGCTGACT 1 chr14:100783-100802 ( 6) TGTGGGAGGCTGACT 1 chr14:94503-94522 ( 6) TGTGGGAGGCTGACT 1 chr14:88223-88242 ( 6) TGTGGGAGGCTGACT 1 chr14:81943-81962 ( 6) TGTGGGAGGCTGACT 1 chr14:75655-75674 ( 6) TGTGGGAGGCTGACT 1 chr14:69375-69394 ( 6) TGTGGGAGGCTGACT 1 chr14:63095-63114 ( 6) TGTGGGAGGCTGACT 1 chr14:56817-56836 ( 6) TGTGGGAGGCTGACT 1 chr14:50537-50556 ( 6) TGTGGGAGGCTGACT 1 chr14:44257-44276 ( 6) TGTGGGAGGCTGACT 1 chr14:37977-37996 ( 6) TGTGGGAGGCTGACT 1 chr14:31697-31716 ( 6) TGTGGGAGGCTGACT 1 chr14:25417-25436 ( 6) TGTGGGAGGCTGACT 1 chr14:19129-19148 ( 6) TGTGGGAGGCTGACT 1 chr14:12849-12868 ( 6) TGTGGGAGGCTGACT 1 chr22:7607272-7607291 ( 3) TGGGGGAATCTTATG 1 chr22:7601109-7601128 ( 3) TGGGGGAATCTTATG 1 chr22:201233-201252 ( 4) TGGGGGAATCTTATG 1 chr22:194798-194817 ( 4) TGGGGGAATCTTATG 1 chr22:188363-188382 ( 4) TGGGGGAATCTTATG 1 chr22:181919-181938 ( 4) TGGGGGAATCTTATG 1 chr22:136725-136744 ( 4) TGGGGGAATCTTATG 1 chr22:130277-130296 ( 4) TGGGGGAATCTTATG 1 chr22:123989-124008 ( 4) TGGGGGAATCTTATG 1 chr22:117542-117561 ( 4) TGGGGGAATCTTATG 1 chr22:111111-111130 ( 4) TGGGGGAATCTTATG 1 chr22:104829-104848 ( 4) TGGGGGAATCTTATG 1 chr22:98386-98405 ( 4) TGGGGGAATCTTATG 1 chr22:92104-92123 ( 4) TGGGGGAATCTTATG 1 chr22:85673-85692 ( 4) TGGGGGAATCTTATG 1 chr22:79399-79418 ( 4) TGGGGGAATCTTATG 1 chr22:72952-72971 ( 4) TGGGGGAATCTTATG 1 chr21:110428-110447 ( 6) TGTGGGGGGCTGACT 1 chr22:7613345-7613364 ( 3) GGGGGTGATAAGACG 1 chr22:4125691-4125710 ( 3) GGGGGTGATAAGACG 1 chr22:4119026-4119045 ( 3) GGGGGTGATAAGACG 1 chr22:4112570-4112589 ( 3) GGGGGTGATAAGACG 1 chr22:4092767-4092786 ( 3) GGGGGTGATAAGACG 1 chr22:4079704-4079723 ( 3) GGGGGTGATAAGACG 1 chr22:4066506-4066525 ( 3) GGGGGTGATAAGACG 1 chr22:4059909-4059928 ( 3) GGGGGTGATAAGACG 1 chr22:4053459-4053478 ( 3) GGGGGTGATAAGACG 1 chr21:2368998-2369017 ( 3) GGGGGTGATAAGACG 1 chr15:2056036-2056055 ( 3) GGGGGTGATAAGACG 1 chr15:2049346-2049365 ( 3) GGGGGTGATAAGACG 1 chr15:2042712-2042731 ( 3) GGGGGTGATAAGACG 1 chr15:2036130-2036149 ( 3) GGGGGTGATAAGACG 1 chr15:2029532-2029551 ( 3) GGGGGTGATAAGACG 1 chr15:2022950-2022969 ( 3) GGGGGTGATAAGACG 1 chr15:2016368-2016387 ( 3) GGGGGTGATAAGACG 1 chr15:2009786-2009805 ( 3) GGGGGTGATAAGACG 1 chr15:2003204-2003223 ( 3) GGGGGTGATAAGACG 1 chr15:1996582-1996601 ( 3) GGGGGTGATAAGACG 1 chr15:1989990-1990009 ( 3) GGGGGTGATAAGACG 1 chr15:1983404-1983423 ( 3) GGGGGTGATAAGACG 1 chr15:1976809-1976828 ( 3) GGGGGTGATAAGACG 1 chr15:1970498-1970517 ( 3) GGGGGTGATAAGACG 1 chr15:1964195-1964214 ( 3) GGGGGTGATAAGACG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 8.36005 E= 2.2e-137 -1362 -1362 -17 153 -1362 -1362 217 -1362 -1362 -1362 151 40 -1362 -1362 217 -1362 -1362 -1362 217 -1362 -1362 -1362 185 -48 152 -1362 -11 -1362 120 -1362 71 -1362 -1362 -1362 71 120 -48 185 -1362 -1362 -48 -1362 -1362 153 -1362 -1362 134 65 185 -1362 -1362 -1362 -1362 196 -1362 -104 -1362 -1362 151 40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 126 E= 2.2e-137 0.000000 0.000000 0.198413 0.801587 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.634921 0.365079 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.801587 0.198413 0.793651 0.000000 0.206349 0.000000 0.634921 0.000000 0.365079 0.000000 0.000000 0.000000 0.365079 0.634921 0.198413 0.801587 0.000000 0.000000 0.198413 0.000000 0.000000 0.801587 0.000000 0.000000 0.563492 0.436508 1.000000 0.000000 0.000000 0.000000 0.000000 0.865079 0.000000 0.134921 0.000000 0.000000 0.634921 0.365079 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGKGGGARKCTKACK MEME-2 regular expression -------------------------------------------------------------------------------- TG[GT]GGG[AG][AG][TG]CT[GT]AC[GT] -------------------------------------------------------------------------------- Time 80.72 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAACYTTKTGCAA MEME-3 width = 14 sites = 134 llr = 1747 E-value = 1.0e-085 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :2772:::::::aa pos.-specific C :3::843::::7:: probability G 2633::::5:a3:: matrix T 8::::67a5a:::: bits 2.2 * 1.9 * 1.7 * ** ** 1.5 * ** ** Relative 1.3 * * * ***** Entropy 1.1 * * * ******** (18.8 bits) 0.9 * ************ 0.6 ************** 0.4 ************** 0.2 ************** 0.0 -------------- Multilevel TGAACTTTGTGCAA consensus CGG CC T G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------- chr22:4123755-4123774 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:4110694-4110713 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:4104091-4104110 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:4051567-4051586 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:4032187-4032206 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:4025866-4025885 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3986270-3986289 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3979677-3979696 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3973084-3973103 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3966470-3966489 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3959852-3959871 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3946652-3946671 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3940047-3940066 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3933442-3933461 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3926773-3926792 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3920174-3920193 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3913565-3913584 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3900356-3900375 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3893747-3893766 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3887439-3887458 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3881122-3881141 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3874519-3874538 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3861595-3861614 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3854996-3855015 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:3848836-3848855 + 4 5.29e-09 ttc tgaactttgtgcaa tgt chr22:222201-222220 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:215904-215923 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:209611-209630 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:203174-203193 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:196730-196749 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:190295-190314 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:183860-183879 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:177416-177435 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:171119-171138 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:164096-164115 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:157803-157822 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:151368-151387 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:145080-145099 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:138651-138670 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:132222-132241 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:125921-125940 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:119490-119509 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:113043-113062 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:106755-106774 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:100330-100349 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:94030-94049 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:87605-87624 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:81325-81344 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:74896-74915 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:68588-68607 - 4 5.29e-09 TTC TGAACTTTGTGCAA TGT chr22:4117152-4117171 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4097494-4097513 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4090893-4090912 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4084431-4084450 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4077830-4077849 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4071233-4071252 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4064636-4064655 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4058039-4058058 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4045260-4045279 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4038663-4038682 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4019269-4019288 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4012668-4012687 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:4006067-4006086 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:3999466-3999485 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:3992865-3992884 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:3953257-3953276 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:3906962-3906981 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:3867914-3867933 + 6 9.56e-09 atttc tgaaccttgtgcaa t chr22:7611488-7611507 + 6 2.14e-08 atttc tgaaccttttgcaa t chr22:7605322-7605341 + 5 6.47e-08 tttc tgagctttttgcaa tg chr22:7599159-7599178 + 5 6.47e-08 tttc tgagctttttgcaa tg chr22:7592992-7593011 + 5 6.47e-08 tttc tgagctttttgcaa tg chr14:4089749-4089768 - 6 1.45e-06 C TCAGCCCTTTGGAA TCTAA chr14:216762-216781 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:210475-210494 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:204202-204221 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:197926-197945 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:191646-191665 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:185358-185377 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:179069-179088 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:172768-172787 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:166476-166495 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:160184-160203 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:153893-153912 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:147620-147639 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:141344-141363 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:135064-135083 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:128780-128799 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:122506-122525 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:116227-116246 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:109948-109967 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:103669-103688 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:97389-97408 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:91109-91128 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:84829-84848 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:78549-78568 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:72261-72280 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:65981-66000 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:59703-59722 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:53423-53442 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:47143-47162 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:40863-40882 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:34583-34602 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:28303-28322 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:22023-22042 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:15735-15754 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr14:9462-9481 - 6 2.15e-06 C TCGGCCCTTTGGAA TCTAA chr8:86941037-86941056 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86916658-86916677 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86904469-86904488 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86868175-86868194 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86843934-86843953 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86795451-86795470 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86783261-86783280 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86771067-86771086 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86335223-86335242 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86323031-86323050 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86310840-86310859 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86298651-86298670 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86286462-86286481 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86274273-86274292 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86262083-86262102 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86249893-86249912 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86237701-86237720 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86213322-86213341 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86201132-86201151 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86188940-86188959 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86140320-86140339 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr8:86128132-86128151 - 2 2.25e-06 AGGGA GAAAATTTTTGCAA T chr13:10098035-10098054 + 7 6.64e-06 ttaaaa tgggccttgtggta chr8:86831882-86831901 - 2 1.34e-05 AGGGA GAACATTTTTGCAA T chr8:86807641-86807660 - 2 1.34e-05 AGGGA GAACATTTTTGCAA T chr22:19106750-19106769 + 3 2.69e-05 gc taaGActtgtggga acaa chr15:5243291-5243310 - 2 6.57e-02 CAGAC GGAGANNNNNNNNN N -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:4123755-4123774 5.3e-09 3_[+3]_3 chr22:4110694-4110713 5.3e-09 3_[+3]_3 chr22:4104091-4104110 5.3e-09 3_[+3]_3 chr22:4051567-4051586 5.3e-09 3_[+3]_3 chr22:4032187-4032206 5.3e-09 3_[+3]_3 chr22:4025866-4025885 5.3e-09 3_[+3]_3 chr22:3986270-3986289 5.3e-09 3_[+3]_3 chr22:3979677-3979696 5.3e-09 3_[+3]_3 chr22:3973084-3973103 5.3e-09 3_[+3]_3 chr22:3966470-3966489 5.3e-09 3_[+3]_3 chr22:3959852-3959871 5.3e-09 3_[+3]_3 chr22:3946652-3946671 5.3e-09 3_[+3]_3 chr22:3940047-3940066 5.3e-09 3_[+3]_3 chr22:3933442-3933461 5.3e-09 3_[+3]_3 chr22:3926773-3926792 5.3e-09 3_[+3]_3 chr22:3920174-3920193 5.3e-09 3_[+3]_3 chr22:3913565-3913584 5.3e-09 3_[+3]_3 chr22:3900356-3900375 5.3e-09 3_[+3]_3 chr22:3893747-3893766 5.3e-09 3_[+3]_3 chr22:3887439-3887458 5.3e-09 3_[+3]_3 chr22:3881122-3881141 5.3e-09 3_[+3]_3 chr22:3874519-3874538 5.3e-09 3_[+3]_3 chr22:3861595-3861614 5.3e-09 3_[+3]_3 chr22:3854996-3855015 5.3e-09 3_[+3]_3 chr22:3848836-3848855 5.3e-09 3_[+3]_3 chr22:222201-222220 5.3e-09 3_[-3]_3 chr22:215904-215923 5.3e-09 3_[-3]_3 chr22:209611-209630 5.3e-09 3_[-3]_3 chr22:203174-203193 5.3e-09 3_[-3]_3 chr22:196730-196749 5.3e-09 3_[-3]_3 chr22:190295-190314 5.3e-09 3_[-3]_3 chr22:183860-183879 5.3e-09 3_[-3]_3 chr22:177416-177435 5.3e-09 3_[-3]_3 chr22:171119-171138 5.3e-09 3_[-3]_3 chr22:164096-164115 5.3e-09 3_[-3]_3 chr22:157803-157822 5.3e-09 3_[-3]_3 chr22:151368-151387 5.3e-09 3_[-3]_3 chr22:145080-145099 5.3e-09 3_[-3]_3 chr22:138651-138670 5.3e-09 3_[-3]_3 chr22:132222-132241 5.3e-09 3_[-3]_3 chr22:125921-125940 5.3e-09 3_[-3]_3 chr22:119490-119509 5.3e-09 3_[-3]_3 chr22:113043-113062 5.3e-09 3_[-3]_3 chr22:106755-106774 5.3e-09 3_[-3]_3 chr22:100330-100349 5.3e-09 3_[-3]_3 chr22:94030-94049 5.3e-09 3_[-3]_3 chr22:87605-87624 5.3e-09 3_[-3]_3 chr22:81325-81344 5.3e-09 3_[-3]_3 chr22:74896-74915 5.3e-09 3_[-3]_3 chr22:68588-68607 5.3e-09 3_[-3]_3 chr22:4117152-4117171 9.6e-09 5_[+3]_1 chr22:4097494-4097513 9.6e-09 5_[+3]_1 chr22:4090893-4090912 9.6e-09 5_[+3]_1 chr22:4084431-4084450 9.6e-09 5_[+3]_1 chr22:4077830-4077849 9.6e-09 5_[+3]_1 chr22:4071233-4071252 9.6e-09 5_[+3]_1 chr22:4064636-4064655 9.6e-09 5_[+3]_1 chr22:4058039-4058058 9.6e-09 5_[+3]_1 chr22:4045260-4045279 9.6e-09 5_[+3]_1 chr22:4038663-4038682 9.6e-09 5_[+3]_1 chr22:4019269-4019288 9.6e-09 5_[+3]_1 chr22:4012668-4012687 9.6e-09 5_[+3]_1 chr22:4006067-4006086 9.6e-09 5_[+3]_1 chr22:3999466-3999485 9.6e-09 5_[+3]_1 chr22:3992865-3992884 9.6e-09 5_[+3]_1 chr22:3953257-3953276 9.6e-09 5_[+3]_1 chr22:3906962-3906981 9.6e-09 5_[+3]_1 chr22:3867914-3867933 9.6e-09 5_[+3]_1 chr22:7611488-7611507 2.1e-08 5_[+3]_1 chr22:7605322-7605341 6.5e-08 4_[+3]_2 chr22:7599159-7599178 6.5e-08 4_[+3]_2 chr22:7592992-7593011 6.5e-08 4_[+3]_2 chr14:4089749-4089768 1.5e-06 5_[-3]_1 chr14:216762-216781 2.1e-06 5_[-3]_1 chr14:210475-210494 2.1e-06 5_[-3]_1 chr14:204202-204221 2.1e-06 5_[-3]_1 chr14:197926-197945 2.1e-06 5_[-3]_1 chr14:191646-191665 2.1e-06 5_[-3]_1 chr14:185358-185377 2.1e-06 5_[-3]_1 chr14:179069-179088 2.1e-06 5_[-3]_1 chr14:172768-172787 2.1e-06 5_[-3]_1 chr14:166476-166495 2.1e-06 5_[-3]_1 chr14:160184-160203 2.1e-06 5_[-3]_1 chr14:153893-153912 2.1e-06 5_[-3]_1 chr14:147620-147639 2.1e-06 5_[-3]_1 chr14:141344-141363 2.1e-06 5_[-3]_1 chr14:135064-135083 2.1e-06 5_[-3]_1 chr14:128780-128799 2.1e-06 5_[-3]_1 chr14:122506-122525 2.1e-06 5_[-3]_1 chr14:116227-116246 2.1e-06 5_[-3]_1 chr14:109948-109967 2.1e-06 5_[-3]_1 chr14:103669-103688 2.1e-06 5_[-3]_1 chr14:97389-97408 2.1e-06 5_[-3]_1 chr14:91109-91128 2.1e-06 5_[-3]_1 chr14:84829-84848 2.1e-06 5_[-3]_1 chr14:78549-78568 2.1e-06 5_[-3]_1 chr14:72261-72280 2.1e-06 5_[-3]_1 chr14:65981-66000 2.1e-06 5_[-3]_1 chr14:59703-59722 2.1e-06 5_[-3]_1 chr14:53423-53442 2.1e-06 5_[-3]_1 chr14:47143-47162 2.1e-06 5_[-3]_1 chr14:40863-40882 2.1e-06 5_[-3]_1 chr14:34583-34602 2.1e-06 5_[-3]_1 chr14:28303-28322 2.1e-06 5_[-3]_1 chr14:22023-22042 2.1e-06 5_[-3]_1 chr14:15735-15754 2.1e-06 5_[-3]_1 chr14:9462-9481 2.1e-06 5_[-3]_1 chr8:86941037-86941056 2.3e-06 1_[-3]_5 chr8:86916658-86916677 2.3e-06 1_[-3]_5 chr8:86904469-86904488 2.3e-06 1_[-3]_5 chr8:86868175-86868194 2.3e-06 1_[-3]_5 chr8:86843934-86843953 2.3e-06 1_[-3]_5 chr8:86795451-86795470 2.3e-06 1_[-3]_5 chr8:86783261-86783280 2.3e-06 1_[-3]_5 chr8:86771067-86771086 2.3e-06 1_[-3]_5 chr8:86335223-86335242 2.3e-06 1_[-3]_5 chr8:86323031-86323050 2.3e-06 1_[-3]_5 chr8:86310840-86310859 2.3e-06 1_[-3]_5 chr8:86298651-86298670 2.3e-06 1_[-3]_5 chr8:86286462-86286481 2.3e-06 1_[-3]_5 chr8:86274273-86274292 2.3e-06 1_[-3]_5 chr8:86262083-86262102 2.3e-06 1_[-3]_5 chr8:86249893-86249912 2.3e-06 1_[-3]_5 chr8:86237701-86237720 2.3e-06 1_[-3]_5 chr8:86213322-86213341 2.3e-06 1_[-3]_5 chr8:86201132-86201151 2.3e-06 1_[-3]_5 chr8:86188940-86188959 2.3e-06 1_[-3]_5 chr8:86140320-86140339 2.3e-06 1_[-3]_5 chr8:86128132-86128151 2.3e-06 1_[-3]_5 chr13:10098035-10098054 6.6e-06 6_[+3] chr8:86831882-86831901 1.3e-05 1_[-3]_5 chr8:86807641-86807660 1.3e-05 1_[-3]_5 chr22:19106750-19106769 2.7e-05 2_[+3]_4 chr15:5243291-5243310 0.066 1_[-3]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAACYTTKTGCAA width=14 seqs=134 chr22:4123755-4123774 ( 4) TGAACTTTGTGCAA 1 chr22:4110694-4110713 ( 4) TGAACTTTGTGCAA 1 chr22:4104091-4104110 ( 4) TGAACTTTGTGCAA 1 chr22:4051567-4051586 ( 4) TGAACTTTGTGCAA 1 chr22:4032187-4032206 ( 4) TGAACTTTGTGCAA 1 chr22:4025866-4025885 ( 4) TGAACTTTGTGCAA 1 chr22:3986270-3986289 ( 4) TGAACTTTGTGCAA 1 chr22:3979677-3979696 ( 4) TGAACTTTGTGCAA 1 chr22:3973084-3973103 ( 4) TGAACTTTGTGCAA 1 chr22:3966470-3966489 ( 4) TGAACTTTGTGCAA 1 chr22:3959852-3959871 ( 4) TGAACTTTGTGCAA 1 chr22:3946652-3946671 ( 4) TGAACTTTGTGCAA 1 chr22:3940047-3940066 ( 4) TGAACTTTGTGCAA 1 chr22:3933442-3933461 ( 4) TGAACTTTGTGCAA 1 chr22:3926773-3926792 ( 4) TGAACTTTGTGCAA 1 chr22:3920174-3920193 ( 4) TGAACTTTGTGCAA 1 chr22:3913565-3913584 ( 4) TGAACTTTGTGCAA 1 chr22:3900356-3900375 ( 4) TGAACTTTGTGCAA 1 chr22:3893747-3893766 ( 4) TGAACTTTGTGCAA 1 chr22:3887439-3887458 ( 4) TGAACTTTGTGCAA 1 chr22:3881122-3881141 ( 4) TGAACTTTGTGCAA 1 chr22:3874519-3874538 ( 4) TGAACTTTGTGCAA 1 chr22:3861595-3861614 ( 4) TGAACTTTGTGCAA 1 chr22:3854996-3855015 ( 4) TGAACTTTGTGCAA 1 chr22:3848836-3848855 ( 4) TGAACTTTGTGCAA 1 chr22:222201-222220 ( 4) TGAACTTTGTGCAA 1 chr22:215904-215923 ( 4) TGAACTTTGTGCAA 1 chr22:209611-209630 ( 4) TGAACTTTGTGCAA 1 chr22:203174-203193 ( 4) TGAACTTTGTGCAA 1 chr22:196730-196749 ( 4) TGAACTTTGTGCAA 1 chr22:190295-190314 ( 4) TGAACTTTGTGCAA 1 chr22:183860-183879 ( 4) TGAACTTTGTGCAA 1 chr22:177416-177435 ( 4) TGAACTTTGTGCAA 1 chr22:171119-171138 ( 4) TGAACTTTGTGCAA 1 chr22:164096-164115 ( 4) TGAACTTTGTGCAA 1 chr22:157803-157822 ( 4) TGAACTTTGTGCAA 1 chr22:151368-151387 ( 4) TGAACTTTGTGCAA 1 chr22:145080-145099 ( 4) TGAACTTTGTGCAA 1 chr22:138651-138670 ( 4) TGAACTTTGTGCAA 1 chr22:132222-132241 ( 4) TGAACTTTGTGCAA 1 chr22:125921-125940 ( 4) TGAACTTTGTGCAA 1 chr22:119490-119509 ( 4) TGAACTTTGTGCAA 1 chr22:113043-113062 ( 4) TGAACTTTGTGCAA 1 chr22:106755-106774 ( 4) TGAACTTTGTGCAA 1 chr22:100330-100349 ( 4) TGAACTTTGTGCAA 1 chr22:94030-94049 ( 4) TGAACTTTGTGCAA 1 chr22:87605-87624 ( 4) TGAACTTTGTGCAA 1 chr22:81325-81344 ( 4) TGAACTTTGTGCAA 1 chr22:74896-74915 ( 4) TGAACTTTGTGCAA 1 chr22:68588-68607 ( 4) TGAACTTTGTGCAA 1 chr22:4117152-4117171 ( 6) TGAACCTTGTGCAA 1 chr22:4097494-4097513 ( 6) TGAACCTTGTGCAA 1 chr22:4090893-4090912 ( 6) TGAACCTTGTGCAA 1 chr22:4084431-4084450 ( 6) TGAACCTTGTGCAA 1 chr22:4077830-4077849 ( 6) TGAACCTTGTGCAA 1 chr22:4071233-4071252 ( 6) TGAACCTTGTGCAA 1 chr22:4064636-4064655 ( 6) TGAACCTTGTGCAA 1 chr22:4058039-4058058 ( 6) TGAACCTTGTGCAA 1 chr22:4045260-4045279 ( 6) TGAACCTTGTGCAA 1 chr22:4038663-4038682 ( 6) TGAACCTTGTGCAA 1 chr22:4019269-4019288 ( 6) TGAACCTTGTGCAA 1 chr22:4012668-4012687 ( 6) TGAACCTTGTGCAA 1 chr22:4006067-4006086 ( 6) TGAACCTTGTGCAA 1 chr22:3999466-3999485 ( 6) TGAACCTTGTGCAA 1 chr22:3992865-3992884 ( 6) TGAACCTTGTGCAA 1 chr22:3953257-3953276 ( 6) TGAACCTTGTGCAA 1 chr22:3906962-3906981 ( 6) TGAACCTTGTGCAA 1 chr22:3867914-3867933 ( 6) TGAACCTTGTGCAA 1 chr22:7611488-7611507 ( 6) TGAACCTTTTGCAA 1 chr22:7605322-7605341 ( 5) TGAGCTTTTTGCAA 1 chr22:7599159-7599178 ( 5) TGAGCTTTTTGCAA 1 chr22:7592992-7593011 ( 5) TGAGCTTTTTGCAA 1 chr14:4089749-4089768 ( 6) TCAGCCCTTTGGAA 1 chr14:216762-216781 ( 6) TCGGCCCTTTGGAA 1 chr14:210475-210494 ( 6) TCGGCCCTTTGGAA 1 chr14:204202-204221 ( 6) TCGGCCCTTTGGAA 1 chr14:197926-197945 ( 6) TCGGCCCTTTGGAA 1 chr14:191646-191665 ( 6) TCGGCCCTTTGGAA 1 chr14:185358-185377 ( 6) TCGGCCCTTTGGAA 1 chr14:179069-179088 ( 6) TCGGCCCTTTGGAA 1 chr14:172768-172787 ( 6) TCGGCCCTTTGGAA 1 chr14:166476-166495 ( 6) TCGGCCCTTTGGAA 1 chr14:160184-160203 ( 6) TCGGCCCTTTGGAA 1 chr14:153893-153912 ( 6) TCGGCCCTTTGGAA 1 chr14:147620-147639 ( 6) TCGGCCCTTTGGAA 1 chr14:141344-141363 ( 6) TCGGCCCTTTGGAA 1 chr14:135064-135083 ( 6) TCGGCCCTTTGGAA 1 chr14:128780-128799 ( 6) TCGGCCCTTTGGAA 1 chr14:122506-122525 ( 6) TCGGCCCTTTGGAA 1 chr14:116227-116246 ( 6) TCGGCCCTTTGGAA 1 chr14:109948-109967 ( 6) TCGGCCCTTTGGAA 1 chr14:103669-103688 ( 6) TCGGCCCTTTGGAA 1 chr14:97389-97408 ( 6) TCGGCCCTTTGGAA 1 chr14:91109-91128 ( 6) TCGGCCCTTTGGAA 1 chr14:84829-84848 ( 6) TCGGCCCTTTGGAA 1 chr14:78549-78568 ( 6) TCGGCCCTTTGGAA 1 chr14:72261-72280 ( 6) TCGGCCCTTTGGAA 1 chr14:65981-66000 ( 6) TCGGCCCTTTGGAA 1 chr14:59703-59722 ( 6) TCGGCCCTTTGGAA 1 chr14:53423-53442 ( 6) TCGGCCCTTTGGAA 1 chr14:47143-47162 ( 6) TCGGCCCTTTGGAA 1 chr14:40863-40882 ( 6) TCGGCCCTTTGGAA 1 chr14:34583-34602 ( 6) TCGGCCCTTTGGAA 1 chr14:28303-28322 ( 6) TCGGCCCTTTGGAA 1 chr14:22023-22042 ( 6) TCGGCCCTTTGGAA 1 chr14:15735-15754 ( 6) TCGGCCCTTTGGAA 1 chr14:9462-9481 ( 6) TCGGCCCTTTGGAA 1 chr8:86941037-86941056 ( 2) GAAAATTTTTGCAA 1 chr8:86916658-86916677 ( 2) GAAAATTTTTGCAA 1 chr8:86904469-86904488 ( 2) GAAAATTTTTGCAA 1 chr8:86868175-86868194 ( 2) GAAAATTTTTGCAA 1 chr8:86843934-86843953 ( 2) GAAAATTTTTGCAA 1 chr8:86795451-86795470 ( 2) GAAAATTTTTGCAA 1 chr8:86783261-86783280 ( 2) GAAAATTTTTGCAA 1 chr8:86771067-86771086 ( 2) GAAAATTTTTGCAA 1 chr8:86335223-86335242 ( 2) GAAAATTTTTGCAA 1 chr8:86323031-86323050 ( 2) GAAAATTTTTGCAA 1 chr8:86310840-86310859 ( 2) GAAAATTTTTGCAA 1 chr8:86298651-86298670 ( 2) GAAAATTTTTGCAA 1 chr8:86286462-86286481 ( 2) GAAAATTTTTGCAA 1 chr8:86274273-86274292 ( 2) GAAAATTTTTGCAA 1 chr8:86262083-86262102 ( 2) GAAAATTTTTGCAA 1 chr8:86249893-86249912 ( 2) GAAAATTTTTGCAA 1 chr8:86237701-86237720 ( 2) GAAAATTTTTGCAA 1 chr8:86213322-86213341 ( 2) GAAAATTTTTGCAA 1 chr8:86201132-86201151 ( 2) GAAAATTTTTGCAA 1 chr8:86188940-86188959 ( 2) GAAAATTTTTGCAA 1 chr8:86140320-86140339 ( 2) GAAAATTTTTGCAA 1 chr8:86128132-86128151 ( 2) GAAAATTTTTGCAA 1 chr13:10098035-10098054 ( 7) TGGGCCTTGTGGTA 1 chr8:86831882-86831901 ( 2) GAACATTTTTGCAA 1 chr8:86807641-86807660 ( 2) GAACATTTTTGCAA 1 chr22:19106750-19106769 ( 3) TAAGACTTGTGGGA 1 chr15:5243291-5243310 ( 2) GGAGANNNNNNNNN 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 14 n= 20919 bayes= 8.51063 E= 1.0e-085 -1371 -1371 -26 155 -57 23 131 -1371 141 -1371 23 -1371 129 -390 46 -1371 -51 186 -1371 -1371 -705 91 -705 106 -705 24 -705 140 -705 -705 -705 184 -705 -705 123 77 -705 -705 -705 184 -705 -705 216 -705 -705 169 32 -705 182 -705 -461 -486 184 -705 -705 -705 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 14 nsites= 134 E= 1.0e-085 0.000000 0.000000 0.186567 0.813433 0.186567 0.261194 0.552239 0.000000 0.738806 0.000000 0.261194 0.000000 0.679104 0.014925 0.305970 0.000000 0.194030 0.805970 0.000000 0.000000 0.002069 0.419573 0.001662 0.576696 0.002069 0.262856 0.001662 0.733412 0.002069 0.001662 0.001662 0.994606 0.002069 0.001662 0.524050 0.472218 0.002069 0.001662 0.001662 0.994606 0.002069 0.001662 0.994200 0.002069 0.002069 0.718080 0.277782 0.002069 0.979681 0.001662 0.009125 0.009532 0.994606 0.001662 0.001662 0.002069 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAACYTTKTGCAA MEME-3 regular expression -------------------------------------------------------------------------------- T[GC][AG][AG]C[TC][TC]T[GT]TG[CG]AA -------------------------------------------------------------------------------- Time 93.84 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTYWTTTTTTTWTT MEME-4 width = 15 sites = 189 llr = 1762 E-value = 4.7e-054 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1::16:::121:41: pos.-specific C 2214:::212:21:: probability G :::::11:2::11:1 matrix T 788549986697499 bits 2.2 1.9 1.7 1.5 * * Relative 1.3 ** * * Entropy 1.1 ** *** * ** (13.5 bits) 0.9 ** **** * ** 0.6 *** **** * ** 0.4 ************ ** 0.2 *************** 0.0 --------------- Multilevel TTTTATTTTTTTTTT consensus C CT C A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr14:1768400-1768441 - 16 1.57e-08 TTGTTTTATT TTTTATTTTTTTATT TTTTTTATTT chr13:5436580-5436625 - 16 1.57e-08 TTGTTTTATT TTTTATTTTTTTATT TTTTTAAATT chr9:77765252-77765271 - 5 1.91e-08 A TTTCTTTTTTTTTTT TCTT chr9:40376614-40376633 + 2 1.91e-08 A TTTCTTTTTTTtttt tctt chr1:12573881-12573900 - 1 1.91e-08 TTCTT TTTCTTTTTTTTTTT chr14:6638384-6638403 + 1 2.70e-08 . tttcttttttttatt atact chr7:58572513-58572549 + 3 2.70e-08 CC ttttttttttttttt gagaaggagt chr7:56644591-56644610 - 3 2.70e-08 GAG TTTTTTTTTTTTTTT TT chr22:10458615-10458634 + 5 1.15e-07 ATGT TTTCATTTCTTtttt t chr13:12758199-12758218 + 6 1.15e-07 atccc cttTAtttttttttt chr7:59146508-59146540 - 5 1.60e-07 CATTTCATCA TTTCATTTCTTTATT TTAT chr5:17596388-17596407 + 3 1.60e-07 ta ttttatttgtttatt tct chr5:17539148-17539167 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17535714-17535733 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17532280-17532299 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17528846-17528865 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17525412-17525431 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17521978-17521997 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17518544-17518563 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17515110-17515129 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17511676-17511695 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17508242-17508261 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17504808-17504827 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17501374-17501393 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17497940-17497959 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17494506-17494525 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17491072-17491091 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17487638-17487657 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17484204-17484223 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17480770-17480789 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17477336-17477355 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17473902-17473921 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17470468-17470487 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17467034-17467053 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17463600-17463619 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr5:17460166-17460185 - 4 1.60e-07 TA TTTTATTTGTTTATT TCT chr3:198728381-198728400 + 6 2.02e-07 GGAAC Cttcttttttttttt chr22:4308191-4308210 - 2 2.44e-07 GGCT TTTTTTTTTCTTTTT A chr16:35095324-35095365 - 1 2.44e-07 ACGGAACCCG TTTCTTTTCTTTTTT chr16:33699831-33699872 - 1 2.44e-07 ACGGAACCCG TTTCTTTTCTTTTTT chr8:12076790-12076809 + 6 2.44e-07 TGTTA TTTtttttgtttttt chr7:59254029-59254055 + 7 2.44e-07 AACACt tttttttttcttttt tctgag chr7:59152892-59152922 - 11 2.44e-07 AACACT TTTTTTTTTCTTTTT TCTGAGAAGG chr20:26260710-26260734 + 9 3.22e-07 ttttattt tttaatttttttttt tt chr7:76510673-76510692 + 3 3.22e-07 tg ttttttttttttgtt gtt chr15:20677173-20677217 + 31 3.77e-07 tggctggtta atttttttttttttt chr7:59310127-59310146 + 1 6.43e-07 . tttctttctttcttT TTAAT chr7:58343992-58344011 - 6 6.43e-07 . TTTCTTTCTTTCTTT CTCTC chr22:8495451-8495470 + 6 7.91e-07 TATGT TTTCATTTCCTTttt chr9:79780930-79780950 + 5 7.91e-07 TATT TCTTTTtttttcttt ta chr9:42920775-42920794 - 3 7.91e-07 ATT TCTTTTTTTTTCTTT TA chr21:2774223-2774242 - 1 1.37e-06 AGTTG TTTTATTTTTTATTT chr15:20965060-20965079 + 6 1.78e-06 TAATC ACttttttttttttt chr8:7366215-7366234 + 1 1.78e-06 . ttttttttgtttgtt ttgtt chr22:11185194-11185213 - 2 2.25e-06 ACAG TTTTTTTTTTTAATT T chr21:8677561-8677580 - 2 2.25e-06 ACAG TTTTTTTTTTTAATT T chr13:11588009-11588028 - 2 2.25e-06 ACAG TTTTTTTTTTTAATT T chr7:59124910-59124929 - 2 2.55e-06 TCTT TCTCTTTCTTTCTTT C chr22:9958357-9958409 + 37 2.93e-06 TCTCCTGTTA Attttttttattatt at chr15:17211525-17211544 - 2 2.93e-06 TACA TTTCTTTTTATTTAT T chr15:5282538-5282557 - 5 3.35e-06 T TTTCATTTTCATTTT TTGG chr16:33220340-33220359 + 3 3.85e-06 ca tttcatttcctcatt tca chr20:30913420-30913439 - 5 4.42e-06 T TCTTATTTTTTATTT ATTT chr16:33948976-33948997 - 6 4.42e-06 CA TTTCATTTCATCATT TCATC chr1:126871617-126871636 + 4 4.42e-06 AGA CTTTATTTATTTAtt tt chr2:90255328-90255347 + 5 5.06e-06 ctgc cttcattttgttatt t chr2:89486113-89486132 - 2 5.06e-06 CTGC CTTCATTTTGTTATT T chr22:277782-277801 - 3 5.78e-06 TGG TTTTTTGTTTTGTTT TT chr15:216471-216490 - 3 5.78e-06 TGG TTTTTTGTTTTGTTT TT chr22:11144157-11144176 + 2 6.56e-06 t atttatttatttttt tgag chr16:21374043-21374062 - 4 6.56e-06 TT CTTTTTTTATTTATT TAT chr7:59994401-59994441 + 2 6.56e-06 G ACTCTTTTTCTTTTT Cgaatgggat chr1:128909003-128909022 - 3 7.37e-06 TTT TTTAATTTATTTTTT TA chr7:60027781-60027800 + 1 1.04e-05 . tctctttctctcttt ctttc chr7:59853271-59853290 - 4 1.04e-05 TC TCTCTTTCTCTCTTT CTT chr7:59309904-59309923 + 1 1.04e-05 . tctctttctctcttt ctttc chr7:58634342-58634361 + 1 1.04e-05 . tctctttctctcttt ctttc chr15:21392017-21392036 + 5 1.16e-05 TTGT TTTTATTATATTttt a chrX:48882772-48882791 + 6 1.30e-05 ATTGC TTCTTTTTTTTCCtt chr9:78557465-78557484 - 1 1.30e-05 CAAGC ACCTATTTTTTTTTT chr22:11287203-11287232 + 11 1.45e-05 tggctccacc ccTCATTTCATTATT TCATC chr16:35591036-35591074 - 8 1.45e-05 TGACTCCACC CCTCATTTCATTATT TCATCAT chr7:59378021-59378052 - 14 1.45e-05 CACC CCTCATTTCATTATT TCATCATTTC chr7:59103554-59103594 - 2 1.45e-05 TGGCTCCACC CCTCATTTCATTATT T chr7:58899815-58899855 + 26 1.45e-05 tggctccacc ccTcatttcattatt t chr7:58853005-58853036 - 2 1.45e-05 TGGCTCCACC CCTCATTTCATTATT T chr7:58655672-58655712 + 26 1.45e-05 tggctccacc ccTcatttcattatt t chr1:128980976-128981017 + 15 1.45e-05 tggctccacc cctcatttcattatt tcatcatttc chr19:53141587-53141606 - 1 1.62e-05 GTTTG TTTTTGCTTTTTTTT chr19:50898848-50898867 + 4 1.62e-05 ttG tttttgctttttttt tt chr16:35346714-35346733 - 3 1.62e-05 TCA CTTCATTTCATCATT TC chr7:59972332-59972362 + 10 1.62e-05 ggctccacc ccTTAtttcattatt tcatcat chr5:17599821-17599841 + 3 1.81e-05 ta ttttattttatttgt gagg chr22:10571574-10571593 - 4 2.02e-05 GC TTTTAGTTTCTCCTT ACC chr22:7668705-7668724 + 3 2.02e-05 gc ttttagtttctcctt acc chr21:8247128-8247147 - 4 2.02e-05 GC TTTTAGTTTCTCCTT ACC chr21:7352013-7352032 + 3 2.02e-05 gc ttttagtttctcctt acc chr21:321886-321905 + 3 2.02e-05 gc ttttagtttctcctt acc chr14:5770383-5770402 - 4 2.02e-05 GC TTTTAGTTTCTCCTT ACC chr11:50498412-50498431 + 6 2.02e-05 AATGA CCCCATTCTTttttt chr7:59079756-59079781 - 11 2.02e-05 A ACTCTTTTTCTCTTT CGAATGGAAT chr7:58679484-58679509 + 2 2.02e-05 A ACTCTTTTTCTCTTT Cgaatggaat chr1:127888877-127888896 + 3 2.02e-05 gc ttttagtttctcctt acc chr16:34873948-34873992 - 9 2.25e-05 AGCCAGCTTT TCTCTGTTGCTTTTT TCTTTTTT chr22:12363312-12363331 + 3 2.50e-05 tt ctatattttcttttt cca chr22:9082300-9082319 + 1 2.50e-05 . CTTtttttaattatt attat chr22:8472105-8472124 - 3 2.50e-05 CCG TTCCATTCTCTTCTT TC chr14:9880565-9880584 - 5 2.50e-05 G CTTCTGTCTATTTTT TAGG chr22:3634325-3634354 - 9 2.77e-05 TAATCCG TTCCATTCCTTTCTT TCGATAGA chr19:50750419-50750438 + 6 2.77e-05 tgccc ttgaattcttttttt chr1:16173618-16173637 + 1 2.77e-05 . TCCCTTTCTTTTctt cccct chr1:16168905-16168924 + 1 2.77e-05 . TCCCTTTCTTTTctt cccct chr7:59951110-59951129 + 5 3.07e-05 cttc ctcctttctttcttt c chr7:59926448-59926467 - 2 3.39e-05 AGAC ATGTTTTCTTTTTTT T chr7:59853086-59853105 - 6 3.39e-05 . TTCTTTTTCTTTAAT GCAAT chr16:34204129-34204148 + 3 3.74e-05 ga acacttttttttttt taa chr16:33476939-33476958 - 6 3.74e-05 . TTCCATTTCATCATT TCATT chr16:33460071-33460090 + 3 3.74e-05 ga acacttttttttttt taa chr20:31497076-31497095 - 5 4.52e-05 T TCTAATTTTTTTGAT ATGG chr22:5962645-5962664 - 1 4.97e-05 ATGTT TTCATTTTTTTTAAT chr22:4460000-4460019 - 6 4.97e-05 . TTATTTTTTTTAATT ATACT chr7:59241810-59241852 - 7 4.97e-05 TTAAATTCAA TTTCATTCAATGATT CTGTAT chr7:59165099-59165144 + 23 4.97e-05 ttaaattcaa tttcattcaatgatt ctgtatgat chrX:151417272-151417291 + 1 5.99e-05 . TTTAATGTTTAtttt agcta chr16:34707963-34707982 + 6 5.99e-05 CTGTT GCttttttctttttt chrX:102510836-102510855 + 4 6.57e-05 GAC TTTtttttaaatttt tt chr22:11208653-11208672 + 3 6.57e-05 ag ttttatgctttgtat att chr21:2762166-2762185 - 1 6.57e-05 CAGCC TTACATTTGTATTTT chr14:5005049-5005080 - 4 6.57e-05 GGCTGGTAAG TTTTATGCTTTGTAT ATT chr13:11611452-11611471 + 3 6.57e-05 ag ttttatgctttgtat att chr13:5424586-5424605 - 1 6.57e-05 CAGCC TTACATTTGTATTTT chr7:59398541-59398570 - 4 6.57e-05 CTTGCTAATA TTTCTTTCTCTTTCT TTG chr7:58874327-58874346 - 6 6.57e-05 . TTTCTTTCTCTTTCT CTCTT chr6:161995709-161995728 + 6 6.57e-05 attac tttaatgttattctt chr15:20880123-20880142 - 6 7.20e-05 . TTTAAGTTTCTTAAT TGGGT chr9:80347077-80347096 + 1 7.88e-05 . atttagtcttatttt gtctt chr9:80189244-80189263 - 6 7.88e-05 . ATTTAGTCTTATTTT GTCTT chr9:42024304-42024323 + 1 7.88e-05 . atttagtcttatttt gtctt chr9:40797574-40797593 - 6 7.88e-05 . ATTTAGTCTTATTTT GTCTT chr22:10745554-10745573 - 2 8.61e-05 TCCA TTCCATTCTTATGTT T chr22:5739210-5739229 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr21:8421073-8421092 - 2 8.61e-05 TCCA TTCCATTCTTATGTT T chr21:6341666-6341685 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr21:6335317-6335336 + 5 8.61e-05 ATGT ATGTAtttatttttt t chr21:6292877-6292896 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr15:5252101-5252120 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr14:2865449-2865468 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr14:2821300-2821319 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr13:10010629-10010648 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr13:9964654-9964673 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr13:9915399-9915418 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr13:9870687-9870706 - 5 8.61e-05 T TTTCATTTTTTGGAG ACGG chr11:50331774-50331793 - 5 8.61e-05 T CTTGATCTTTTTTTT AATT chr1:144040665-144040684 - 1 8.61e-05 GCTTC CTCCTTTCTTTCCTT chr7:59947632-59947651 + 4 9.39e-05 cgg cttcatgccattttt ct chr7:59128431-59128450 - 3 9.39e-05 CGG CTTCATGCCATTTTT CT chr7:58591769-58591788 + 4 9.39e-05 tgg cttcatgccattttt ct chr7:58595244-58595263 + 5 1.21e-04 tttc gttctttctctcttt c chr2:90324196-90324218 + 9 1.21e-04 tgtcagga ACTAattttatgatt chr2:89417200-89417220 - 2 1.21e-04 CAGGA ACTAATTTTATGATT C chr15:15593833-15593852 + 6 1.31e-04 tgaaa attcttttctttaag chr1:128944246-128944265 + 1 1.31e-04 . tttcatcatttcatt tcatt chr1:128841286-128841305 - 6 1.31e-04 . TTTCATCATTTCATT TCATT chr22:5985609-5985628 + 3 1.43e-04 ca ttactttcttttgat agc chr7:60022981-60023000 - 1 1.43e-04 AATCG ATTATTGTTTTGATT chr21:278716-278735 - 1 1.82e-04 GTCCT TTTCTGGTTTTTTGT chr16:34517838-34517857 - 2 1.82e-04 TTAT TTTCTGTTTCACCTT A chr7:58337326-58337346 - 7 1.82e-04 . ATATATTTTATTTAT GTTGAG chr16:34768926-34768945 + 4 1.96e-04 att actttggttttcttt ct chr21:2577434-2577453 + 4 2.12e-04 cta ttttttttaatactt tt chr16:34221290-34221309 - 2 2.12e-04 ATCT TTTCATCTCGTCATT T chr8:86893327-86893346 + 2 2.12e-04 a atgcttgtgtttttt gcac chr17:22431961-22431980 - 5 2.47e-04 A TTCTATTCTATTAGT ACCC chr19:38797805-38797824 - 2 2.86e-04 CCTT TTTATTTATTTTCAT T chr17:38953782-38953801 - 4 2.86e-04 AG CTGGTTTTTTTGATT ACT chr17:37294607-37294626 + 3 2.86e-04 AG CTGGTTTTTTTGATT ACt chrX:48921948-48921967 + 5 3.08e-04 tgaa tcttttgtcaatttt a chr15:15491861-15491880 + 3 3.08e-04 tg attatttccattctt aca chr14:669523-669542 - 4 3.08e-04 AT TCTGAGTCTTTTATG GTT chr22:11581934-11581953 + 1 3.55e-04 . tcttttcatttcatt tcatc chr10:134726330-13472634 + 5 3.55e-04 cata cctctgtctgtcttt g chr8:86706969-86706988 - 5 3.55e-04 G TCTAAGTCTCTTTTG ATCA chr8:86512283-86512302 - 5 3.55e-04 G TCTAAGTCTCTTTTG ATCA chr4:193543510-193543529 + 5 3.55e-04 cata cctctgtctgtcttt g chr7:145025726-145025745 + 5 4.37e-04 GAGC TCggattttttattt t chr5:71447391-71447410 - 6 4.37e-04 . TTTTTTTTTGAGATG GAGTC chr20:29735915-29735939 - 2 4.68e-04 GTGAAGATA CTTCTTTTTCACCAT A chr9:41082584-41082603 - 2 5.00e-04 TTTG TTTTGTTTTGTTTTG T chr21:6286547-6286566 + 6 7.36e-04 NNNNN NNGTAtttatttttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:1768400-1768441 1.6e-08 15_[-4]_12 chr13:5436580-5436625 1.6e-08 15_[-4]_16 chr9:77765252-77765271 1.9e-08 4_[-4]_1 chr9:40376614-40376633 1.9e-08 1_[+4]_4 chr1:12573881-12573900 1.9e-08 [-4]_5 chr14:6638384-6638403 2.7e-08 [+4]_5 chr7:58572513-58572549 2.7e-08 2_[+4]_20 chr7:56644591-56644610 2.7e-08 2_[-4]_3 chr22:10458615-10458634 1.1e-07 4_[+4]_1 chr13:12758199-12758218 1.1e-07 5_[+4] chr7:59146508-59146540 1.6e-07 4_[-4]_14 chr5:17596388-17596407 1.6e-07 2_[+4]_3 chr5:17539148-17539167 1.6e-07 3_[-4]_2 chr5:17535714-17535733 1.6e-07 3_[-4]_2 chr5:17532280-17532299 1.6e-07 3_[-4]_2 chr5:17528846-17528865 1.6e-07 3_[-4]_2 chr5:17525412-17525431 1.6e-07 3_[-4]_2 chr5:17521978-17521997 1.6e-07 3_[-4]_2 chr5:17518544-17518563 1.6e-07 3_[-4]_2 chr5:17515110-17515129 1.6e-07 3_[-4]_2 chr5:17511676-17511695 1.6e-07 3_[-4]_2 chr5:17508242-17508261 1.6e-07 3_[-4]_2 chr5:17504808-17504827 1.6e-07 3_[-4]_2 chr5:17501374-17501393 1.6e-07 3_[-4]_2 chr5:17497940-17497959 1.6e-07 3_[-4]_2 chr5:17494506-17494525 1.6e-07 3_[-4]_2 chr5:17491072-17491091 1.6e-07 3_[-4]_2 chr5:17487638-17487657 1.6e-07 3_[-4]_2 chr5:17484204-17484223 1.6e-07 3_[-4]_2 chr5:17480770-17480789 1.6e-07 3_[-4]_2 chr5:17477336-17477355 1.6e-07 3_[-4]_2 chr5:17473902-17473921 1.6e-07 3_[-4]_2 chr5:17470468-17470487 1.6e-07 3_[-4]_2 chr5:17467034-17467053 1.6e-07 3_[-4]_2 chr5:17463600-17463619 1.6e-07 3_[-4]_2 chr5:17460166-17460185 1.6e-07 3_[-4]_2 chr3:198728381-198728400 2e-07 5_[+4] chr22:4308191-4308210 2.4e-07 1_[-4]_4 chr16:35095324-35095365 2.4e-07 [-4]_27 chr16:33699831-33699872 2.4e-07 [-4]_27 chr8:12076790-12076809 2.4e-07 5_[+4] chr7:59254029-59254055 2.4e-07 6_[+4]_6 chr7:59152892-59152922 2.4e-07 10_[-4]_6 chr20:26260710-26260734 3.2e-07 8_[+4]_2 chr7:76510673-76510692 3.2e-07 2_[+4]_3 chr15:20677173-20677217 3.8e-07 30_[+4] chr7:59310127-59310146 6.4e-07 [+4]_5 chr7:58343992-58344011 6.4e-07 5_[-4] chr22:8495451-8495470 7.9e-07 5_[+4] chr9:79780930-79780950 7.9e-07 4_[+4]_2 chr9:42920775-42920794 7.9e-07 2_[-4]_3 chr21:2774223-2774242 1.4e-06 [-4]_5 chr15:20965060-20965079 1.8e-06 5_[+4] chr8:7366215-7366234 1.8e-06 [+4]_5 chr22:11185194-11185213 2.2e-06 1_[-4]_4 chr21:8677561-8677580 2.2e-06 1_[-4]_4 chr13:11588009-11588028 2.2e-06 1_[-4]_4 chr7:59124910-59124929 2.6e-06 1_[-4]_4 chr22:9958357-9958409 2.9e-06 36_[+4]_2 chr15:17211525-17211544 2.9e-06 1_[-4]_4 chr15:5282538-5282557 3.3e-06 4_[-4]_1 chr16:33220340-33220359 3.8e-06 2_[+4]_3 chr20:30913420-30913439 4.4e-06 4_[-4]_1 chr16:33948976-33948997 4.4e-06 5_[-4]_2 chr1:126871617-126871636 4.4e-06 3_[+4]_2 chr2:90255328-90255347 5.1e-06 4_[+4]_1 chr2:89486113-89486132 5.1e-06 1_[-4]_4 chr22:277782-277801 5.8e-06 2_[-4]_3 chr15:216471-216490 5.8e-06 2_[-4]_3 chr22:11144157-11144176 6.6e-06 1_[+4]_4 chr16:21374043-21374062 6.6e-06 3_[-4]_2 chr7:59994401-59994441 6.6e-06 1_[+4]_25 chr1:128909003-128909022 7.4e-06 2_[-4]_3 chr7:60027781-60027800 1e-05 [+4]_5 chr7:59853271-59853290 1e-05 3_[-4]_2 chr7:59309904-59309923 1e-05 [+4]_5 chr7:58634342-58634361 1e-05 [+4]_5 chr15:21392017-21392036 1.2e-05 4_[+4]_1 chrX:48882772-48882791 1.3e-05 5_[+4] chr9:78557465-78557484 1.3e-05 [-4]_5 chr22:11287203-11287232 1.5e-05 10_[+4]_5 chr16:35591036-35591074 1.5e-05 7_[-4]_17 chr7:59378021-59378052 1.5e-05 13_[-4]_4 chr7:59103554-59103594 1.5e-05 1_[-4]_25 chr7:58899815-58899855 1.5e-05 25_[+4]_1 chr7:58853005-58853036 1.5e-05 1_[-4]_16 chr7:58655672-58655712 1.5e-05 25_[+4]_1 chr1:128980976-128981017 1.5e-05 14_[+4]_13 chr19:53141587-53141606 1.6e-05 [-4]_5 chr19:50898848-50898867 1.6e-05 3_[+4]_2 chr16:35346714-35346733 1.6e-05 2_[-4]_3 chr7:59972332-59972362 1.6e-05 9_[+4]_7 chr5:17599821-17599841 1.8e-05 2_[+4]_4 chr22:10571574-10571593 2e-05 3_[-4]_2 chr22:7668705-7668724 2e-05 2_[+4]_3 chr21:8247128-8247147 2e-05 3_[-4]_2 chr21:7352013-7352032 2e-05 2_[+4]_3 chr21:321886-321905 2e-05 2_[+4]_3 chr14:5770383-5770402 2e-05 3_[-4]_2 chr11:50498412-50498431 2e-05 5_[+4] chr7:59079756-59079781 2e-05 10_[-4]_1 chr7:58679484-58679509 2e-05 1_[+4]_10 chr1:127888877-127888896 2e-05 2_[+4]_3 chr16:34873948-34873992 2.2e-05 8_[-4]_22 chr22:12363312-12363331 2.5e-05 2_[+4]_3 chr22:9082300-9082319 2.5e-05 [+4]_5 chr22:8472105-8472124 2.5e-05 2_[-4]_3 chr14:9880565-9880584 2.5e-05 4_[-4]_1 chr22:3634325-3634354 2.8e-05 8_[-4]_7 chr19:50750419-50750438 2.8e-05 5_[+4] chr1:16173618-16173637 2.8e-05 [+4]_5 chr1:16168905-16168924 2.8e-05 [+4]_5 chr7:59951110-59951129 3.1e-05 4_[+4]_1 chr7:59926448-59926467 3.4e-05 1_[-4]_4 chr7:59853086-59853105 3.4e-05 5_[-4] chr16:34204129-34204148 3.7e-05 2_[+4]_3 chr16:33476939-33476958 3.7e-05 5_[-4] chr16:33460071-33460090 3.7e-05 2_[+4]_3 chr20:31497076-31497095 4.5e-05 4_[-4]_1 chr22:5962645-5962664 5e-05 [-4]_5 chr22:4460000-4460019 5e-05 5_[-4] chr7:59241810-59241852 5e-05 6_[-4]_22 chr7:59165099-59165144 5e-05 22_[+4]_9 chrX:151417272-151417291 6e-05 [+4]_5 chr16:34707963-34707982 6e-05 5_[+4] chrX:102510836-102510855 6.6e-05 3_[+4]_2 chr22:11208653-11208672 6.6e-05 2_[+4]_3 chr21:2762166-2762185 6.6e-05 [-4]_5 chr14:5005049-5005080 6.6e-05 3_[-4]_14 chr13:11611452-11611471 6.6e-05 2_[+4]_3 chr13:5424586-5424605 6.6e-05 [-4]_5 chr7:59398541-59398570 6.6e-05 3_[-4]_12 chr7:58874327-58874346 6.6e-05 5_[-4] chr6:161995709-161995728 6.6e-05 5_[+4] chr15:20880123-20880142 7.2e-05 5_[-4] chr9:80347077-80347096 7.9e-05 [+4]_5 chr9:80189244-80189263 7.9e-05 5_[-4] chr9:42024304-42024323 7.9e-05 [+4]_5 chr9:40797574-40797593 7.9e-05 5_[-4] chr22:10745554-10745573 8.6e-05 1_[-4]_4 chr22:5739210-5739229 8.6e-05 4_[-4]_1 chr21:8421073-8421092 8.6e-05 1_[-4]_4 chr21:6341666-6341685 8.6e-05 4_[-4]_1 chr21:6335317-6335336 8.6e-05 4_[+4]_1 chr21:6292877-6292896 8.6e-05 4_[-4]_1 chr15:5252101-5252120 8.6e-05 4_[-4]_1 chr14:2865449-2865468 8.6e-05 4_[-4]_1 chr14:2821300-2821319 8.6e-05 4_[-4]_1 chr13:10010629-10010648 8.6e-05 4_[-4]_1 chr13:9964654-9964673 8.6e-05 4_[-4]_1 chr13:9915399-9915418 8.6e-05 4_[-4]_1 chr13:9870687-9870706 8.6e-05 4_[-4]_1 chr11:50331774-50331793 8.6e-05 4_[-4]_1 chr1:144040665-144040684 8.6e-05 [-4]_5 chr7:59947632-59947651 9.4e-05 3_[+4]_2 chr7:59128431-59128450 9.4e-05 2_[-4]_3 chr7:58591769-58591788 9.4e-05 3_[+4]_2 chr7:58595244-58595263 0.00012 4_[+4]_1 chr2:90324196-90324218 0.00012 8_[+4] chr2:89417200-89417220 0.00012 1_[-4]_5 chr15:15593833-15593852 0.00013 5_[+4] chr1:128944246-128944265 0.00013 [+4]_5 chr1:128841286-128841305 0.00013 5_[-4] chr22:5985609-5985628 0.00014 2_[+4]_3 chr7:60022981-60023000 0.00014 [-4]_5 chr21:278716-278735 0.00018 [-4]_5 chr16:34517838-34517857 0.00018 1_[-4]_4 chr7:58337326-58337346 0.00018 6_[-4] chr16:34768926-34768945 0.0002 3_[+4]_2 chr21:2577434-2577453 0.00021 3_[+4]_2 chr16:34221290-34221309 0.00021 1_[-4]_4 chr8:86893327-86893346 0.00021 1_[+4]_4 chr17:22431961-22431980 0.00025 4_[-4]_1 chr19:38797805-38797824 0.00029 1_[-4]_4 chr17:38953782-38953801 0.00029 3_[-4]_2 chr17:37294607-37294626 0.00029 2_[+4]_3 chrX:48921948-48921967 0.00031 4_[+4]_1 chr15:15491861-15491880 0.00031 2_[+4]_3 chr14:669523-669542 0.00031 3_[-4]_2 chr22:11581934-11581953 0.00035 [+4]_5 chr10:134726330-13472634 0.00035 4_[+4]_1 chr8:86706969-86706988 0.00035 4_[-4]_1 chr8:86512283-86512302 0.00035 4_[-4]_1 chr4:193543510-193543529 0.00035 4_[+4]_1 chr7:145025726-145025745 0.00044 4_[+4]_1 chr5:71447391-71447410 0.00044 5_[-4] chr20:29735915-29735939 0.00047 1_[-4]_9 chr9:41082584-41082603 0.0005 1_[-4]_4 chr21:6286547-6286566 0.00074 5_[+4] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTYWTTTTTTTWTT width=15 seqs=189 chr14:1768400-1768441 ( 16) TTTTATTTTTTTATT 1 chr13:5436580-5436625 ( 16) TTTTATTTTTTTATT 1 chr9:77765252-77765271 ( 5) TTTCTTTTTTTTTTT 1 chr9:40376614-40376633 ( 2) TTTCTTTTTTTTTTT 1 chr1:12573881-12573900 ( 1) TTTCTTTTTTTTTTT 1 chr14:6638384-6638403 ( 1) TTTCTTTTTTTTATT 1 chr7:58572513-58572549 ( 3) TTTTTTTTTTTTTTT 1 chr7:56644591-56644610 ( 3) TTTTTTTTTTTTTTT 1 chr22:10458615-10458634 ( 5) TTTCATTTCTTTTTT 1 chr13:12758199-12758218 ( 6) CTTTATTTTTTTTTT 1 chr7:59146508-59146540 ( 5) TTTCATTTCTTTATT 1 chr5:17596388-17596407 ( 3) TTTTATTTGTTTATT 1 chr5:17539148-17539167 ( 4) TTTTATTTGTTTATT 1 chr5:17535714-17535733 ( 4) TTTTATTTGTTTATT 1 chr5:17532280-17532299 ( 4) TTTTATTTGTTTATT 1 chr5:17528846-17528865 ( 4) TTTTATTTGTTTATT 1 chr5:17525412-17525431 ( 4) TTTTATTTGTTTATT 1 chr5:17521978-17521997 ( 4) TTTTATTTGTTTATT 1 chr5:17518544-17518563 ( 4) TTTTATTTGTTTATT 1 chr5:17515110-17515129 ( 4) TTTTATTTGTTTATT 1 chr5:17511676-17511695 ( 4) TTTTATTTGTTTATT 1 chr5:17508242-17508261 ( 4) TTTTATTTGTTTATT 1 chr5:17504808-17504827 ( 4) TTTTATTTGTTTATT 1 chr5:17501374-17501393 ( 4) TTTTATTTGTTTATT 1 chr5:17497940-17497959 ( 4) TTTTATTTGTTTATT 1 chr5:17494506-17494525 ( 4) TTTTATTTGTTTATT 1 chr5:17491072-17491091 ( 4) TTTTATTTGTTTATT 1 chr5:17487638-17487657 ( 4) TTTTATTTGTTTATT 1 chr5:17484204-17484223 ( 4) TTTTATTTGTTTATT 1 chr5:17480770-17480789 ( 4) TTTTATTTGTTTATT 1 chr5:17477336-17477355 ( 4) TTTTATTTGTTTATT 1 chr5:17473902-17473921 ( 4) TTTTATTTGTTTATT 1 chr5:17470468-17470487 ( 4) TTTTATTTGTTTATT 1 chr5:17467034-17467053 ( 4) TTTTATTTGTTTATT 1 chr5:17463600-17463619 ( 4) TTTTATTTGTTTATT 1 chr5:17460166-17460185 ( 4) TTTTATTTGTTTATT 1 chr3:198728381-198728400 ( 6) CTTCTTTTTTTTTTT 1 chr22:4308191-4308210 ( 2) TTTTTTTTTCTTTTT 1 chr16:35095324-35095365 ( 1) TTTCTTTTCTTTTTT 1 chr16:33699831-33699872 ( 1) TTTCTTTTCTTTTTT 1 chr8:12076790-12076809 ( 6) TTTTTTTTGTTTTTT 1 chr7:59254029-59254055 ( 7) TTTTTTTTTCTTTTT 1 chr7:59152892-59152922 ( 11) TTTTTTTTTCTTTTT 1 chr20:26260710-26260734 ( 9) TTTAATTTTTTTTTT 1 chr7:76510673-76510692 ( 3) TTTTTTTTTTTTGTT 1 chr15:20677173-20677217 ( 31) ATTTTTTTTTTTTTT 1 chr7:59310127-59310146 ( 1) TTTCTTTCTTTCTTT 1 chr7:58343992-58344011 ( 6) TTTCTTTCTTTCTTT 1 chr22:8495451-8495470 ( 6) TTTCATTTCCTTTTT 1 chr9:79780930-79780950 ( 5) TCTTTTTTTTTCTTT 1 chr9:42920775-42920794 ( 3) TCTTTTTTTTTCTTT 1 chr21:2774223-2774242 ( 1) TTTTATTTTTTATTT 1 chr15:20965060-20965079 ( 6) ACTTTTTTTTTTTTT 1 chr8:7366215-7366234 ( 1) TTTTTTTTGTTTGTT 1 chr22:11185194-11185213 ( 2) TTTTTTTTTTTAATT 1 chr21:8677561-8677580 ( 2) TTTTTTTTTTTAATT 1 chr13:11588009-11588028 ( 2) TTTTTTTTTTTAATT 1 chr7:59124910-59124929 ( 2) TCTCTTTCTTTCTTT 1 chr22:9958357-9958409 ( 37) ATTTTTTTTATTATT 1 chr15:17211525-17211544 ( 2) TTTCTTTTTATTTAT 1 chr15:5282538-5282557 ( 5) TTTCATTTTCATTTT 1 chr16:33220340-33220359 ( 3) TTTCATTTCCTCATT 1 chr20:30913420-30913439 ( 5) TCTTATTTTTTATTT 1 chr16:33948976-33948997 ( 6) TTTCATTTCATCATT 1 chr1:126871617-126871636 ( 4) CTTTATTTATTTATT 1 chr2:90255328-90255347 ( 5) CTTCATTTTGTTATT 1 chr2:89486113-89486132 ( 2) CTTCATTTTGTTATT 1 chr22:277782-277801 ( 3) TTTTTTGTTTTGTTT 1 chr15:216471-216490 ( 3) TTTTTTGTTTTGTTT 1 chr22:11144157-11144176 ( 2) ATTTATTTATTTTTT 1 chr16:21374043-21374062 ( 4) CTTTTTTTATTTATT 1 chr7:59994401-59994441 ( 2) ACTCTTTTTCTTTTT 1 chr1:128909003-128909022 ( 3) TTTAATTTATTTTTT 1 chr7:60027781-60027800 ( 1) TCTCTTTCTCTCTTT 1 chr7:59853271-59853290 ( 4) TCTCTTTCTCTCTTT 1 chr7:59309904-59309923 ( 1) TCTCTTTCTCTCTTT 1 chr7:58634342-58634361 ( 1) TCTCTTTCTCTCTTT 1 chr15:21392017-21392036 ( 5) TTTTATTATATTTTT 1 chrX:48882772-48882791 ( 6) TTCTTTTTTTTCCTT 1 chr9:78557465-78557484 ( 1) ACCTATTTTTTTTTT 1 chr22:11287203-11287232 ( 11) CCTCATTTCATTATT 1 chr16:35591036-35591074 ( 8) CCTCATTTCATTATT 1 chr7:59378021-59378052 ( 14) CCTCATTTCATTATT 1 chr7:59103554-59103594 ( 2) CCTCATTTCATTATT 1 chr7:58899815-58899855 ( 26) CCTCATTTCATTATT 1 chr7:58853005-58853036 ( 2) CCTCATTTCATTATT 1 chr7:58655672-58655712 ( 26) CCTCATTTCATTATT 1 chr1:128980976-128981017 ( 15) CCTCATTTCATTATT 1 chr19:53141587-53141606 ( 1) TTTTTGCTTTTTTTT 1 chr19:50898848-50898867 ( 4) TTTTTGCTTTTTTTT 1 chr16:35346714-35346733 ( 3) CTTCATTTCATCATT 1 chr7:59972332-59972362 ( 10) CCTTATTTCATTATT 1 chr5:17599821-17599841 ( 3) TTTTATTTTATTTGT 1 chr22:10571574-10571593 ( 4) TTTTAGTTTCTCCTT 1 chr22:7668705-7668724 ( 3) TTTTAGTTTCTCCTT 1 chr21:8247128-8247147 ( 4) TTTTAGTTTCTCCTT 1 chr21:7352013-7352032 ( 3) TTTTAGTTTCTCCTT 1 chr21:321886-321905 ( 3) TTTTAGTTTCTCCTT 1 chr14:5770383-5770402 ( 4) TTTTAGTTTCTCCTT 1 chr11:50498412-50498431 ( 6) CCCCATTCTTTTTTT 1 chr7:59079756-59079781 ( 11) ACTCTTTTTCTCTTT 1 chr7:58679484-58679509 ( 2) ACTCTTTTTCTCTTT 1 chr1:127888877-127888896 ( 3) TTTTAGTTTCTCCTT 1 chr16:34873948-34873992 ( 9) TCTCTGTTGCTTTTT 1 chr22:12363312-12363331 ( 3) CTATATTTTCTTTTT 1 chr22:9082300-9082319 ( 1) CTTTTTTTAATTATT 1 chr22:8472105-8472124 ( 3) TTCCATTCTCTTCTT 1 chr14:9880565-9880584 ( 5) CTTCTGTCTATTTTT 1 chr22:3634325-3634354 ( 9) TTCCATTCCTTTCTT 1 chr19:50750419-50750438 ( 6) TTGAATTCTTTTTTT 1 chr1:16173618-16173637 ( 1) TCCCTTTCTTTTCTT 1 chr1:16168905-16168924 ( 1) TCCCTTTCTTTTCTT 1 chr7:59951110-59951129 ( 5) CTCCTTTCTTTCTTT 1 chr7:59926448-59926467 ( 2) ATGTTTTCTTTTTTT 1 chr7:59853086-59853105 ( 6) TTCTTTTTCTTTAAT 1 chr16:34204129-34204148 ( 3) ACACTTTTTTTTTTT 1 chr16:33476939-33476958 ( 6) TTCCATTTCATCATT 1 chr16:33460071-33460090 ( 3) ACACTTTTTTTTTTT 1 chr20:31497076-31497095 ( 5) TCTAATTTTTTTGAT 1 chr22:5962645-5962664 ( 1) TTCATTTTTTTTAAT 1 chr22:4460000-4460019 ( 6) TTATTTTTTTTAATT 1 chr7:59241810-59241852 ( 7) TTTCATTCAATGATT 1 chr7:59165099-59165144 ( 23) TTTCATTCAATGATT 1 chrX:151417272-151417291 ( 1) TTTAATGTTTATTTT 1 chr16:34707963-34707982 ( 6) GCTTTTTTCTTTTTT 1 chrX:102510836-102510855 ( 4) TTTTTTTTAAATTTT 1 chr22:11208653-11208672 ( 3) TTTTATGCTTTGTAT 1 chr21:2762166-2762185 ( 1) TTACATTTGTATTTT 1 chr14:5005049-5005080 ( 4) TTTTATGCTTTGTAT 1 chr13:11611452-11611471 ( 3) TTTTATGCTTTGTAT 1 chr13:5424586-5424605 ( 1) TTACATTTGTATTTT 1 chr7:59398541-59398570 ( 4) TTTCTTTCTCTTTCT 1 chr7:58874327-58874346 ( 6) TTTCTTTCTCTTTCT 1 chr6:161995709-161995728 ( 6) TTTAATGTTATTCTT 1 chr15:20880123-20880142 ( 6) TTTAAGTTTCTTAAT 1 chr9:80347077-80347096 ( 1) ATTTAGTCTTATTTT 1 chr9:80189244-80189263 ( 6) ATTTAGTCTTATTTT 1 chr9:42024304-42024323 ( 1) ATTTAGTCTTATTTT 1 chr9:40797574-40797593 ( 6) ATTTAGTCTTATTTT 1 chr22:10745554-10745573 ( 2) TTCCATTCTTATGTT 1 chr22:5739210-5739229 ( 5) TTTCATTTTTTGGAG 1 chr21:8421073-8421092 ( 2) TTCCATTCTTATGTT 1 chr21:6341666-6341685 ( 5) TTTCATTTTTTGGAG 1 chr21:6335317-6335336 ( 5) ATGTATTTATTTTTT 1 chr21:6292877-6292896 ( 5) TTTCATTTTTTGGAG 1 chr15:5252101-5252120 ( 5) TTTCATTTTTTGGAG 1 chr14:2865449-2865468 ( 5) TTTCATTTTTTGGAG 1 chr14:2821300-2821319 ( 5) TTTCATTTTTTGGAG 1 chr13:10010629-10010648 ( 5) TTTCATTTTTTGGAG 1 chr13:9964654-9964673 ( 5) TTTCATTTTTTGGAG 1 chr13:9915399-9915418 ( 5) TTTCATTTTTTGGAG 1 chr13:9870687-9870706 ( 5) TTTCATTTTTTGGAG 1 chr11:50331774-50331793 ( 5) CTTGATCTTTTTTTT 1 chr1:144040665-144040684 ( 1) CTCCTTTCTTTCCTT 1 chr7:59947632-59947651 ( 4) CTTCATGCCATTTTT 1 chr7:59128431-59128450 ( 3) CTTCATGCCATTTTT 1 chr7:58591769-58591788 ( 4) CTTCATGCCATTTTT 1 chr7:58595244-58595263 ( 5) GTTCTTTCTCTCTTT 1 chr2:90324196-90324218 ( 9) ACTAATTTTATGATT 1 chr2:89417200-89417220 ( 2) ACTAATTTTATGATT 1 chr15:15593833-15593852 ( 6) ATTCTTTTCTTTAAG 1 chr1:128944246-128944265 ( 1) TTTCATCATTTCATT 1 chr1:128841286-128841305 ( 6) TTTCATCATTTCATT 1 chr22:5985609-5985628 ( 3) TTACTTTCTTTTGAT 1 chr7:60022981-60023000 ( 1) ATTATTGTTTTGATT 1 chr21:278716-278735 ( 1) TTTCTGGTTTTTTGT 1 chr16:34517838-34517857 ( 2) TTTCTGTTTCACCTT 1 chr7:58337326-58337346 ( 7) ATATATTTTATTTAT 1 chr16:34768926-34768945 ( 4) ACTTTGGTTTTCTTT 1 chr21:2577434-2577453 ( 4) TTTTTTTTAATACTT 1 chr16:34221290-34221309 ( 2) TTTCATCTCGTCATT 1 chr8:86893327-86893346 ( 2) ATGCTTGTGTTTTTT 1 chr17:22431961-22431980 ( 5) TTCTATTCTATTAGT 1 chr19:38797805-38797824 ( 2) TTTATTTATTTTCAT 1 chr17:38953782-38953801 ( 4) CTGGTTTTTTTGATT 1 chr17:37294607-37294626 ( 3) CTGGTTTTTTTGATT 1 chrX:48921948-48921967 ( 5) TCTTTTGTCAATTTT 1 chr15:15491861-15491880 ( 3) ATTATTTCCATTCTT 1 chr14:669523-669542 ( 4) TCTGAGTCTTTTATG 1 chr22:11581934-11581953 ( 1) TCTTTTCATTTCATT 1 chr10:134726330-13472634 ( 5) CCTCTGTCTGTCTTT 1 chr8:86706969-86706988 ( 5) TCTAAGTCTCTTTTG 1 chr8:86512283-86512302 ( 5) TCTAAGTCTCTTTTG 1 chr4:193543510-193543529 ( 5) CCTCTGTCTGTCTTT 1 chr7:145025726-145025745 ( 5) TCGGATTTTTTATTT 1 chr5:71447391-71447410 ( 6) TTTTTTTTTGAGATG 1 chr20:29735915-29735939 ( 2) CTTCTTTTTCACCAT 1 chr9:41082584-41082603 ( 2) TTTTGTTTTGTTTTG 1 chr21:6286547-6286566 ( 6) NNGTATTTATTTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 8.06437 E= 4.7e-054 -111 -43 -424 132 -755 -3 -755 149 -271 -149 -240 159 -180 93 -307 76 110 -1421 -539 54 -1421 -1421 -81 165 -1421 -259 -149 167 -339 0 -1421 144 -225 -59 -44 118 -71 -44 -259 118 -180 -1421 -1421 173 -271 -27 -87 123 42 -115 -140 68 -119 -439 -381 162 -1421 -1421 -140 172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 189 E= 4.7e-054 0.128451 0.165200 0.011761 0.694589 0.001467 0.218110 0.001179 0.779245 0.042328 0.079365 0.042328 0.835979 0.079365 0.423280 0.026455 0.470899 0.592593 0.000000 0.005291 0.402116 0.000000 0.000000 0.126984 0.873016 0.000000 0.037037 0.079365 0.883598 0.026455 0.222222 0.000000 0.751323 0.058201 0.148148 0.164021 0.629630 0.169312 0.164021 0.037037 0.629630 0.079365 0.000000 0.000000 0.920635 0.042328 0.185185 0.121693 0.650794 0.370370 0.100529 0.084656 0.444444 0.121693 0.010582 0.015873 0.851852 0.000000 0.000000 0.084656 0.915344 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYWTTTTTTTWTT MEME-4 regular expression -------------------------------------------------------------------------------- T[TC]T[TC][AT]TT[TC]TTTT[TA]TT -------------------------------------------------------------------------------- Time 107.50 secs. ******************************************************************************** ******************************************************************************** MOTIF GCAAACCCWCAGSCM MEME-5 width = 15 sites = 117 llr = 1250 E-value = 4.3e-023 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 Description -------------------------------------------------------------------------------- Simplified A 31877:315:a31:5 pos.-specific C 1922:778:a:1675 probability G 51:123:::::633: matrix T 2::11:::5:::::: bits 2.2 1.9 * 1.7 * 1.5 * ** Relative 1.3 * * ** Entropy 1.1 ** ** ** * (15.4 bits) 0.9 ** ******** ** 0.6 ************** 0.4 *************** 0.2 *************** 0.0 --------------- Multilevel GCAAACCCACAGCCC consensus A GA T AGGA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr8:86893627-86893646 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86869386-86869405 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86845145-86845164 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86833093-86833112 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86808852-86808871 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86784472-86784491 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86772278-86772297 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86747891-86747910 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86735699-86735718 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86723510-86723529 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86696299-86696318 + 2 2.22e-09 g gcaaacccacagcca atat chr8:86489422-86489441 + 2 2.22e-09 g gcaaacccacagcca atat chr8:86275484-86275503 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86263294-86263313 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86251106-86251125 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86226722-86226741 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86214533-86214552 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86202343-86202362 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86190153-86190172 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86177961-86177980 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86165772-86165791 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86153583-86153602 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86129343-86129362 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86117153-86117172 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr8:86091295-86091314 - 5 2.22e-09 G GCAAACCCACAGCCA ATAT chr21:8367733-8367752 - 6 4.93e-08 . GCAAAGCCTCAACCC CAATT chr21:7273481-7273500 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr21:210198-210217 - 6 4.93e-08 . GCAAAGCCTCAACCC CAATT chr15:1974736-1974755 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1968433-1968452 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1962130-1962149 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1949519-1949538 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1943216-1943235 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1936916-1936935 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1930320-1930339 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1923724-1923743 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1917128-1917147 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1910579-1910598 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1904247-1904266 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1897622-1897641 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1891293-1891312 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr15:1884662-1884681 + 1 4.93e-08 . GCAAagcctcaaccc caatt chr8:86238914-86238933 - 5 4.93e-08 G GCAAACCCACAGACA ATAT chr22:9832790-9832812 + 4 1.91e-07 GTC TCAAACCCTcagggc ctgat chr22:3844343-3844365 - 6 1.91e-07 GTC TCAAACCCTCAGGGC CTGAT chr21:7284533-7284558 + 2 1.91e-07 T TCAAACCCTcagggc ctgatgggaa chr21:2342776-2342796 - 6 1.91e-07 C TCAAACCCTCAGGGC CTGAT chr15:1874213-1874235 - 6 1.91e-07 GTC TCAAACCCTCAGGGC CTGAT chr14:4081296-4081319 - 5 1.91e-07 CTGTT TCAAACCCTCAGGGC CTGA chr13:11128309-11128349 - 6 1.91e-07 TCATTCTTTT TCAAACCCTCAGGGC CTGAT chr3:95754003-95754022 - 6 1.91e-07 . TCAAACCCTCAGGGC CTGAT chr21:217202-217221 - 6 3.00e-07 . GCAAGGCCTCAACCC CAATT chr15:154954-154973 - 6 3.00e-07 . GCAAGGCCTCAACCC CAATT chr14:1663241-1663263 - 6 6.52e-07 GTC TCAAACCCTCAGAGC CTGAT chr22:10687877-10687897 - 6 1.95e-06 C TCAAACCATCAGGGC CTGAT chr21:8363408-8363438 - 11 1.95e-06 TCTGTC TCAAACCATCAGGGC CTGATGGGAA chr14:5886655-5886675 - 6 1.95e-06 C TCAAACCATCAGGGC CTGAT chr14:5888312-5888331 - 1 2.72e-06 TCTTC ACCAGCCCTCAGGGA chr14:219798-219817 + 6 2.72e-06 tcttc accagccctcaggga chr14:213507-213526 + 6 2.72e-06 tcttc accagccctcaggga chr14:207234-207253 + 6 2.72e-06 tcttc accagccctcaggga chr14:200958-200977 + 6 2.72e-06 tcttc accagccctcaggga chr14:188394-188413 + 6 2.72e-06 tcttc accagccctcaggga chr14:182109-182128 + 6 2.72e-06 tcttc accagccctcaggga chr14:175808-175827 + 6 2.72e-06 tcttc accagccctcaggga chr14:163220-163239 + 6 2.72e-06 tcttc accagccctcaggga chr21:2352671-2352690 - 4 4.63e-06 CC GCACACACACAAACA CAC chr22:5858401-5858420 - 5 6.26e-06 G GCAAACATTCAGACC CCAA chr15:15130382-15130401 - 2 9.26e-06 CGTC ACACATACTCAGCCC A chr22:7588319-7588341 - 6 1.11e-05 GTT TCAAACCCTCAGTGC CTGAT chr15:15496842-15496861 - 2 1.22e-05 CGTC ACACATACTCAGCCA G chr15:1955818-1955837 + 1 1.34e-05 . GTAAagcctcaaccc caatt chr14:1696413-1696432 + 2 1.34e-05 g acaaacattcagacc ctca chr21:7274783-7274824 + 23 2.94e-05 ACCCATATCc acacacacacacaca cacac chr16:35286040-35286062 + 4 3.47e-05 cca gccttgactcagccc tggac chr16:35117336-35117358 - 6 3.47e-05 CCA GCCTTGACTCAGCCC TGGAC chr16:34857819-34857841 - 6 3.47e-05 CCA GCCTTGACTCAGCCC TGGAC chr16:34724090-34724112 + 4 3.47e-05 cca gccttgactcagccc tggac chr16:33890404-33890426 + 4 3.47e-05 cca gccttgactcagccc tggac chr16:33721844-33721866 - 6 3.47e-05 CCA GCCTTGACTCAGCCC TGGAC chr14:5883277-5883319 + 1 3.76e-05 . agaggcccacagcgc cggcgcaggc chr14:4079061-4079080 + 1 3.76e-05 . agaggcccacagcgc cggcg chr14:1659961-1660009 + 5 3.76e-05 gcag agaggcccacagcgc cggcgcaggc chr9:76972965-76973013 + 27 3.76e-05 gcaggcgcag agaggcccacagcgc cggcgcag chr15:5296210-5296229 - 6 4.43e-05 . ACGAAACCTCAACCC CAATT chr2:91659415-91659438 - 1 4.43e-05 TGTCAGGAA CCAATCAAACAGGCA chr2:90941490-90941513 + 10 4.43e-05 tgtcaggaa ccaatcaaacaggca chr2:89911658-89911677 - 1 4.43e-05 AGGAA CCAATCAAACAGGCA chr8:86311753-86311772 - 3 4.80e-05 GTG CAAAACACACAAGCA TT chr8:86250806-86250825 - 3 4.80e-05 GTG CAAAACACACAAGCA TT chr9:40331823-40331842 - 1 6.07e-05 AAACT CCAAACCCAGAAGGC chr21:99667-99686 + 6 7.06e-05 cagac acacgcacacacaca chr9:76973191-76973210 + 4 8.84e-05 cag agcggcccacagcgc cg chr12:37372292-37372311 + 2 1.02e-04 g ccccagccccagccc agtc chr21:7281061-7281080 + 5 1.10e-04 cacc gcacacacagaaaca c chr2:89438430-89438449 + 2 1.10e-04 t aaaggcacacagcgc cgga chr21:93324-93343 + 3 1.18e-04 ac acacacaaacacaca cac chr21:86991-87010 + 3 1.18e-04 ac acacacaaacacaca cac chr21:80662-80681 + 3 1.18e-04 ac acacacaaacacaca cac chr21:74341-74360 + 3 1.18e-04 ac acacacaaacacaca cac chr21:68003-68022 + 3 1.18e-04 ac acacacaaacacaca cac chr8:7379690-7379709 + 5 1.27e-04 gtga gccagcacactgggc t chr22:9183387-9183406 + 2 2.51e-04 g ggaaacaatcggacc ccag chr21:8238698-8238717 - 4 2.51e-04 GA ACACTGCTACAAGGC TCT chr2:91849654-91849673 - 4 2.51e-04 AC GGGAGACCTCAGGCC CAG chr2:91752100-91752119 + 2 2.85e-04 c aaccacaAACAGGGC TGCA chr2:90801269-90801288 - 5 2.85e-04 C AACCACAAACAGGGC TGCA chr1:143645816-143645853 - 21 3.24e-04 CAA ACAAAGACACCAAGA GCCTGGAACT chr7:59967823-59967842 + 2 5.29e-04 t tccaacccaagagca tgga chr7:58895324-58895343 + 2 5.29e-04 t tccaacccaagagca tgga chr1:143747163-143747182 + 5 5.61e-04 GAAg gcacaatcacagctc a chr1:143420180-143420199 - 2 5.61e-04 GAAG GCACAATCACAGCTC A chr21:10554939-10554958 - 2 7.48e-04 AATC TCAAATCAACATCCT C chr14:6655174-6655193 + 5 7.48e-04 aatc tcaaatcaacatcct c chr9:47774689-47774708 + 5 7.48e-04 aatc tcaaatcaacatcct c chr1:16439576-16439595 + 6 8.37e-04 tccaa gagaaGCTTCAGAGA chr13:11599350-11599369 - 2 2.70e-03 CACT TCCCGGGTTCAAGCA A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:86893627-86893646 2.2e-09 4_[-5]_1 chr8:86869386-86869405 2.2e-09 4_[-5]_1 chr8:86845145-86845164 2.2e-09 4_[-5]_1 chr8:86833093-86833112 2.2e-09 4_[-5]_1 chr8:86808852-86808871 2.2e-09 4_[-5]_1 chr8:86784472-86784491 2.2e-09 4_[-5]_1 chr8:86772278-86772297 2.2e-09 4_[-5]_1 chr8:86747891-86747910 2.2e-09 4_[-5]_1 chr8:86735699-86735718 2.2e-09 4_[-5]_1 chr8:86723510-86723529 2.2e-09 4_[-5]_1 chr8:86696299-86696318 2.2e-09 1_[+5]_4 chr8:86489422-86489441 2.2e-09 1_[+5]_4 chr8:86275484-86275503 2.2e-09 4_[-5]_1 chr8:86263294-86263313 2.2e-09 4_[-5]_1 chr8:86251106-86251125 2.2e-09 4_[-5]_1 chr8:86226722-86226741 2.2e-09 4_[-5]_1 chr8:86214533-86214552 2.2e-09 4_[-5]_1 chr8:86202343-86202362 2.2e-09 4_[-5]_1 chr8:86190153-86190172 2.2e-09 4_[-5]_1 chr8:86177961-86177980 2.2e-09 4_[-5]_1 chr8:86165772-86165791 2.2e-09 4_[-5]_1 chr8:86153583-86153602 2.2e-09 4_[-5]_1 chr8:86129343-86129362 2.2e-09 4_[-5]_1 chr8:86117153-86117172 2.2e-09 4_[-5]_1 chr8:86091295-86091314 2.2e-09 4_[-5]_1 chr21:8367733-8367752 4.9e-08 5_[-5] chr21:7273481-7273500 4.9e-08 [+5]_5 chr21:210198-210217 4.9e-08 5_[-5] chr15:1974736-1974755 4.9e-08 [+5]_5 chr15:1968433-1968452 4.9e-08 [+5]_5 chr15:1962130-1962149 4.9e-08 [+5]_5 chr15:1949519-1949538 4.9e-08 [+5]_5 chr15:1943216-1943235 4.9e-08 [+5]_5 chr15:1936916-1936935 4.9e-08 [+5]_5 chr15:1930320-1930339 4.9e-08 [+5]_5 chr15:1923724-1923743 4.9e-08 [+5]_5 chr15:1917128-1917147 4.9e-08 [+5]_5 chr15:1910579-1910598 4.9e-08 [+5]_5 chr15:1904247-1904266 4.9e-08 [+5]_5 chr15:1897622-1897641 4.9e-08 [+5]_5 chr15:1891293-1891312 4.9e-08 [+5]_5 chr15:1884662-1884681 4.9e-08 [+5]_5 chr8:86238914-86238933 4.9e-08 4_[-5]_1 chr22:9832790-9832812 1.9e-07 3_[+5]_5 chr22:3844343-3844365 1.9e-07 5_[-5]_3 chr21:7284533-7284558 1.9e-07 1_[+5]_10 chr21:2342776-2342796 1.9e-07 5_[-5]_1 chr15:1874213-1874235 1.9e-07 5_[-5]_3 chr14:4081296-4081319 1.9e-07 4_[-5]_5 chr13:11128309-11128349 1.9e-07 5_[-5]_21 chr3:95754003-95754022 1.9e-07 5_[-5] chr21:217202-217221 3e-07 5_[-5] chr15:154954-154973 3e-07 5_[-5] chr14:1663241-1663263 6.5e-07 5_[-5]_3 chr22:10687877-10687897 2e-06 5_[-5]_1 chr21:8363408-8363438 2e-06 10_[-5]_6 chr14:5886655-5886675 2e-06 5_[-5]_1 chr14:5888312-5888331 2.7e-06 [-5]_5 chr14:219798-219817 2.7e-06 5_[+5] chr14:213507-213526 2.7e-06 5_[+5] chr14:207234-207253 2.7e-06 5_[+5] chr14:200958-200977 2.7e-06 5_[+5] chr14:188394-188413 2.7e-06 5_[+5] chr14:182109-182128 2.7e-06 5_[+5] chr14:175808-175827 2.7e-06 5_[+5] chr14:163220-163239 2.7e-06 5_[+5] chr21:2352671-2352690 4.6e-06 3_[-5]_2 chr22:5858401-5858420 6.3e-06 4_[-5]_1 chr15:15130382-15130401 9.3e-06 1_[-5]_4 chr22:7588319-7588341 1.1e-05 5_[-5]_3 chr15:15496842-15496861 1.2e-05 1_[-5]_4 chr15:1955818-1955837 1.3e-05 [+5]_5 chr14:1696413-1696432 1.3e-05 1_[+5]_4 chr21:7274783-7274824 2.9e-05 22_[+5]_5 chr16:35286040-35286062 3.5e-05 3_[+5]_5 chr16:35117336-35117358 3.5e-05 5_[-5]_3 chr16:34857819-34857841 3.5e-05 5_[-5]_3 chr16:34724090-34724112 3.5e-05 3_[+5]_5 chr16:33890404-33890426 3.5e-05 3_[+5]_5 chr16:33721844-33721866 3.5e-05 5_[-5]_3 chr14:5883277-5883319 3.8e-05 [+5]_28 chr14:4079061-4079080 3.8e-05 [+5]_5 chr14:1659961-1660009 3.8e-05 4_[+5]_30 chr9:76972965-76973013 3.8e-05 26_[+5]_8 chr15:5296210-5296229 4.4e-05 5_[-5] chr2:91659415-91659438 4.4e-05 [-5]_9 chr2:90941490-90941513 4.4e-05 9_[+5] chr2:89911658-89911677 4.4e-05 [-5]_5 chr8:86311753-86311772 4.8e-05 2_[-5]_3 chr8:86250806-86250825 4.8e-05 2_[-5]_3 chr9:40331823-40331842 6.1e-05 [-5]_5 chr21:99667-99686 7.1e-05 5_[+5] chr9:76973191-76973210 8.8e-05 3_[+5]_2 chr12:37372292-37372311 0.0001 1_[+5]_4 chr21:7281061-7281080 0.00011 4_[+5]_1 chr2:89438430-89438449 0.00011 1_[+5]_4 chr21:93324-93343 0.00012 2_[+5]_3 chr21:86991-87010 0.00012 2_[+5]_3 chr21:80662-80681 0.00012 2_[+5]_3 chr21:74341-74360 0.00012 2_[+5]_3 chr21:68003-68022 0.00012 2_[+5]_3 chr8:7379690-7379709 0.00013 4_[+5]_1 chr22:9183387-9183406 0.00025 1_[+5]_4 chr21:8238698-8238717 0.00025 3_[-5]_2 chr2:91849654-91849673 0.00025 3_[-5]_2 chr2:91752100-91752119 0.00029 1_[+5]_4 chr2:90801269-90801288 0.00029 4_[-5]_1 chr1:143645816-143645853 0.00032 20_[-5]_3 chr7:59967823-59967842 0.00053 1_[+5]_4 chr7:58895324-58895343 0.00053 1_[+5]_4 chr1:143747163-143747182 0.00056 4_[+5]_1 chr1:143420180-143420199 0.00056 1_[-5]_4 chr21:10554939-10554958 0.00075 1_[-5]_4 chr14:6655174-6655193 0.00075 4_[+5]_1 chr9:47774689-47774708 0.00075 4_[+5]_1 chr1:16439576-16439595 0.00084 5_[+5] chr13:11599350-11599369 0.0027 1_[-5]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCAAACCCWCAGSCM width=15 seqs=117 chr8:86893627-86893646 ( 5) GCAAACCCACAGCCA 1 chr8:86869386-86869405 ( 5) GCAAACCCACAGCCA 1 chr8:86845145-86845164 ( 5) GCAAACCCACAGCCA 1 chr8:86833093-86833112 ( 5) GCAAACCCACAGCCA 1 chr8:86808852-86808871 ( 5) GCAAACCCACAGCCA 1 chr8:86784472-86784491 ( 5) GCAAACCCACAGCCA 1 chr8:86772278-86772297 ( 5) GCAAACCCACAGCCA 1 chr8:86747891-86747910 ( 5) GCAAACCCACAGCCA 1 chr8:86735699-86735718 ( 5) GCAAACCCACAGCCA 1 chr8:86723510-86723529 ( 5) GCAAACCCACAGCCA 1 chr8:86696299-86696318 ( 2) GCAAACCCACAGCCA 1 chr8:86489422-86489441 ( 2) GCAAACCCACAGCCA 1 chr8:86275484-86275503 ( 5) GCAAACCCACAGCCA 1 chr8:86263294-86263313 ( 5) GCAAACCCACAGCCA 1 chr8:86251106-86251125 ( 5) GCAAACCCACAGCCA 1 chr8:86226722-86226741 ( 5) GCAAACCCACAGCCA 1 chr8:86214533-86214552 ( 5) GCAAACCCACAGCCA 1 chr8:86202343-86202362 ( 5) GCAAACCCACAGCCA 1 chr8:86190153-86190172 ( 5) GCAAACCCACAGCCA 1 chr8:86177961-86177980 ( 5) GCAAACCCACAGCCA 1 chr8:86165772-86165791 ( 5) GCAAACCCACAGCCA 1 chr8:86153583-86153602 ( 5) GCAAACCCACAGCCA 1 chr8:86129343-86129362 ( 5) GCAAACCCACAGCCA 1 chr8:86117153-86117172 ( 5) GCAAACCCACAGCCA 1 chr8:86091295-86091314 ( 5) GCAAACCCACAGCCA 1 chr21:8367733-8367752 ( 6) GCAAAGCCTCAACCC 1 chr21:7273481-7273500 ( 1) GCAAAGCCTCAACCC 1 chr21:210198-210217 ( 6) GCAAAGCCTCAACCC 1 chr15:1974736-1974755 ( 1) GCAAAGCCTCAACCC 1 chr15:1968433-1968452 ( 1) GCAAAGCCTCAACCC 1 chr15:1962130-1962149 ( 1) GCAAAGCCTCAACCC 1 chr15:1949519-1949538 ( 1) GCAAAGCCTCAACCC 1 chr15:1943216-1943235 ( 1) GCAAAGCCTCAACCC 1 chr15:1936916-1936935 ( 1) GCAAAGCCTCAACCC 1 chr15:1930320-1930339 ( 1) GCAAAGCCTCAACCC 1 chr15:1923724-1923743 ( 1) GCAAAGCCTCAACCC 1 chr15:1917128-1917147 ( 1) GCAAAGCCTCAACCC 1 chr15:1910579-1910598 ( 1) GCAAAGCCTCAACCC 1 chr15:1904247-1904266 ( 1) GCAAAGCCTCAACCC 1 chr15:1897622-1897641 ( 1) GCAAAGCCTCAACCC 1 chr15:1891293-1891312 ( 1) GCAAAGCCTCAACCC 1 chr15:1884662-1884681 ( 1) GCAAAGCCTCAACCC 1 chr8:86238914-86238933 ( 5) GCAAACCCACAGACA 1 chr22:9832790-9832812 ( 4) TCAAACCCTCAGGGC 1 chr22:3844343-3844365 ( 6) TCAAACCCTCAGGGC 1 chr21:7284533-7284558 ( 2) TCAAACCCTCAGGGC 1 chr21:2342776-2342796 ( 6) TCAAACCCTCAGGGC 1 chr15:1874213-1874235 ( 6) TCAAACCCTCAGGGC 1 chr14:4081296-4081319 ( 5) TCAAACCCTCAGGGC 1 chr13:11128309-11128349 ( 6) TCAAACCCTCAGGGC 1 chr3:95754003-95754022 ( 6) TCAAACCCTCAGGGC 1 chr21:217202-217221 ( 6) GCAAGGCCTCAACCC 1 chr15:154954-154973 ( 6) GCAAGGCCTCAACCC 1 chr14:1663241-1663263 ( 6) TCAAACCCTCAGAGC 1 chr22:10687877-10687897 ( 6) TCAAACCATCAGGGC 1 chr21:8363408-8363438 ( 11) TCAAACCATCAGGGC 1 chr14:5886655-5886675 ( 6) TCAAACCATCAGGGC 1 chr14:5888312-5888331 ( 1) ACCAGCCCTCAGGGA 1 chr14:219798-219817 ( 6) ACCAGCCCTCAGGGA 1 chr14:213507-213526 ( 6) ACCAGCCCTCAGGGA 1 chr14:207234-207253 ( 6) ACCAGCCCTCAGGGA 1 chr14:200958-200977 ( 6) ACCAGCCCTCAGGGA 1 chr14:188394-188413 ( 6) ACCAGCCCTCAGGGA 1 chr14:182109-182128 ( 6) ACCAGCCCTCAGGGA 1 chr14:175808-175827 ( 6) ACCAGCCCTCAGGGA 1 chr14:163220-163239 ( 6) ACCAGCCCTCAGGGA 1 chr21:2352671-2352690 ( 4) GCACACACACAAACA 1 chr22:5858401-5858420 ( 5) GCAAACATTCAGACC 1 chr15:15130382-15130401 ( 2) ACACATACTCAGCCC 1 chr22:7588319-7588341 ( 6) TCAAACCCTCAGTGC 1 chr15:15496842-15496861 ( 2) ACACATACTCAGCCA 1 chr15:1955818-1955837 ( 1) GTAAAGCCTCAACCC 1 chr14:1696413-1696432 ( 2) ACAAACATTCAGACC 1 chr21:7274783-7274824 ( 23) ACACACACACACACA 1 chr16:35286040-35286062 ( 4) GCCTTGACTCAGCCC 1 chr16:35117336-35117358 ( 6) GCCTTGACTCAGCCC 1 chr16:34857819-34857841 ( 6) GCCTTGACTCAGCCC 1 chr16:34724090-34724112 ( 4) GCCTTGACTCAGCCC 1 chr16:33890404-33890426 ( 4) GCCTTGACTCAGCCC 1 chr16:33721844-33721866 ( 6) GCCTTGACTCAGCCC 1 chr14:5883277-5883319 ( 1) AGAGGCCCACAGCGC 1 chr14:4079061-4079080 ( 1) AGAGGCCCACAGCGC 1 chr14:1659961-1660009 ( 5) AGAGGCCCACAGCGC 1 chr9:76972965-76973013 ( 27) AGAGGCCCACAGCGC 1 chr15:5296210-5296229 ( 6) ACGAAACCTCAACCC 1 chr2:91659415-91659438 ( 1) CCAATCAAACAGGCA 1 chr2:90941490-90941513 ( 10) CCAATCAAACAGGCA 1 chr2:89911658-89911677 ( 1) CCAATCAAACAGGCA 1 chr8:86311753-86311772 ( 3) CAAAACACACAAGCA 1 chr8:86250806-86250825 ( 3) CAAAACACACAAGCA 1 chr9:40331823-40331842 ( 1) CCAAACCCAGAAGGC 1 chr21:99667-99686 ( 6) ACACGCACACACACA 1 chr9:76973191-76973210 ( 4) AGCGGCCCACAGCGC 1 chr12:37372292-37372311 ( 2) CCCCAGCCCCAGCCC 1 chr21:7281061-7281080 ( 5) GCACACACAGAAACA 1 chr2:89438430-89438449 ( 2) AAAGGCACACAGCGC 1 chr21:93324-93343 ( 3) ACACACAAACACACA 1 chr21:86991-87010 ( 3) ACACACAAACACACA 1 chr21:80662-80681 ( 3) ACACACAAACACACA 1 chr21:74341-74360 ( 3) ACACACAAACACACA 1 chr21:68003-68022 ( 3) ACACACAAACACACA 1 chr8:7379690-7379709 ( 5) GCCAGCACACTGGGC 1 chr22:9183387-9183406 ( 2) GGAAACAATCGGACC 1 chr21:8238698-8238717 ( 4) ACACTGCTACAAGGC 1 chr2:91849654-91849673 ( 4) GGGAGACCTCAGGCC 1 chr2:91752100-91752119 ( 2) AACCACAAACAGGGC 1 chr2:90801269-90801288 ( 5) AACCACAAACAGGGC 1 chr1:143645816-143645853 ( 21) ACAAAGACACCAAGA 1 chr7:59967823-59967842 ( 2) TCCAACCCAAGAGCA 1 chr7:58895324-58895343 ( 2) TCCAACCCAAGAGCA 1 chr1:143747163-143747182 ( 5) GCACAATCACAGCTC 1 chr1:143420180-143420199 ( 2) GCACAATCACAGCTC 1 chr21:10554939-10554958 ( 2) TCAAATCAACATCCT 1 chr14:6655174-6655193 ( 5) TCAAATCAACATCCT 1 chr9:47774689-47774708 ( 5) TCAAATCAACATCCT 1 chr1:16439576-16439595 ( 6) GAGAAGCTTCAGAGA 1 chr13:11599350-11599369 ( 2) TCCCGGGTTCAAGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 8.88788 E= 4.3e-023 -11 -190 123 -77 -243 198 -190 -502 149 -18 -312 -1351 142 -53 -212 -243 141 -1351 -31 -170 -302 156 25 -270 -11 169 -470 -402 -93 187 -1351 -270 86 -470 -1351 81 -402 212 -370 -1351 179 -470 -312 -502 -7 -190 154 -343 -102 134 38 -502 -1351 162 43 -402 76 118 -1351 -343 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 117 E= 4.3e-023 0.256410 0.059829 0.521368 0.162393 0.051282 0.880342 0.059829 0.008547 0.777778 0.196581 0.025641 0.000000 0.743590 0.153846 0.051282 0.051282 0.735043 0.000000 0.179487 0.085470 0.034188 0.658120 0.264957 0.042735 0.256410 0.717949 0.008547 0.017094 0.145299 0.811966 0.000000 0.042735 0.504274 0.008547 0.000000 0.487179 0.017094 0.965812 0.017094 0.000000 0.957265 0.008547 0.025641 0.008547 0.264957 0.059829 0.649573 0.025641 0.136752 0.564103 0.290598 0.008547 0.000000 0.683761 0.299145 0.017094 0.470085 0.504274 0.000000 0.025641 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAAACCCWCAGSCM MEME-5 regular expression -------------------------------------------------------------------------------- [GA]CAAA[CG][CA]C[AT]CA[GA][CG][CG][CA] -------------------------------------------------------------------------------- Time 120.09 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGAATGGAAT MEME-6 width = 11 sites = 160 llr = 1512 E-value = 1.2e-019 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 Description -------------------------------------------------------------------------------- Simplified A 11199111981 pos.-specific C :2:1::::::: probability G :781119912: matrix T 9:1::8::::9 bits 2.2 1.9 1.7 * 1.5 ** Relative 1.3 * *** *** * Entropy 1.1 * *** ***** (13.6 bits) 0.9 *********** 0.6 *********** 0.4 *********** 0.2 *********** 0.0 ----------- Multilevel TGGAATGGAAT consensus C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------- chr22:11607069-11607088 - 9 3.09e-07 G TGGAATGGAAT TTCGCCGT chr22:11309935-11309969 + 15 3.09e-07 CTTTTTCgaa tggaatggaat ggaagggaat chr22:9749246-9749265 + 9 3.09e-07 gaatggaa tggaatggaat g chr22:9749147-9749180 + 23 3.09e-07 gggattagag tggaatggaat g chr22:9730319-9730338 + 5 3.09e-07 ggaa tggaatggaat ggagt chr22:9076994-9077013 + 9 3.09e-07 gaatggaa tggaatggaat g chr22:9076929-9076948 + 4 3.09e-07 gaa tggaatggaat ggagtg chr22:6428235-6428269 - 11 3.09e-07 CTTTTTCGAA TGGAATGGAAT GGAAGGGAAT chr22:5985707-5985726 - 6 3.09e-07 GGAA TGGAATGGAAT GGAAT chr22:3620011-3620030 + 4 3.09e-07 gag tggaatggaat agaaag chr21:9224405-9224424 - 6 3.09e-07 GGAG TGGAATGGAAT GCAGT chr21:8832845-8832864 - 9 3.09e-07 G TGGAATGGAAT TTCGCCGT chr21:7125078-7125097 + 10 3.09e-07 gggcttgaa tggaatggaat chr17:22534145-22534164 + 2 3.09e-07 g tggaatggaat ttcgccgt chr14:9249860-9249879 + 10 3.09e-07 ggaatggaa tggaatggaat chr14:8865761-8865780 - 7 3.09e-07 GAA TGGAATGGAAT CGAATA chr14:8830290-8830309 - 9 3.09e-07 G TGGAATGGAAT TTCGCCGT chr14:8372890-8372909 + 2 3.09e-07 g tggaatggaat TTCGCCGT chr14:8344902-8344921 + 4 3.09e-07 aaa tggaatggaat tgaatg chr14:5944780-5944799 + 6 3.09e-07 tggaa tggaatggaat caat chr13:12098575-12098594 - 6 3.09e-07 GGAG TGGAATGGAAT GCAGT chr13:11743410-11743429 - 9 3.09e-07 G TGGAATGGAAT TTCGCCGT chr13:11313554-11313573 - 3 3.09e-07 AATGGGA TGGAATGGAAT GG chr7:59298734-59298776 + 25 3.09e-07 tcgaagggaa tggaatggaat catcgaac chr22:16961131-16961164 - 14 8.68e-07 TTTTTCTTTT TCGAATGGAAT GGAAAGGAAT chr22:9748569-9748612 + 5 8.68e-07 ggag tggaatggagt ggactggtgt chr22:9076079-9076100 + 10 8.68e-07 ggaatgtag tggaatggagt gg chr22:7833620-7833639 - 10 8.68e-07 . TGGAATGGAGT GGAGTAGAT chr22:5998419-5998438 - 2 8.68e-07 GCGAGGGA TGGAATGGAGT G chr22:470112-470131 - 7 8.68e-07 CAG TGGAATGGAGT GGACTG chr21:10950356-10950375 - 5 8.68e-07 TGAAG TGGAATGGAGT GGAG chr21:8727550-8727569 + 5 8.68e-07 ggac tcgaatggaat ggact chr21:456871-456890 - 7 8.68e-07 CAG TGGAATGGAGT GGACTG chr17:22398572-22398591 - 1 8.68e-07 TTTTCTTTT TCGAATGGAAT chr17:22293678-22293697 - 1 8.68e-07 TTTTCTTTT TCGAATGGAAT chr15:342506-342525 - 7 8.68e-07 CAG TGGAATGGAGT GGACTG chr13:5106504-5106523 + 4 8.68e-07 gaa tggaatggagt ggactg chr7:60013913-60013952 + 17 8.68e-07 ttgaatggaa tcgaatggaat catcactgaa chr7:59285900-59285919 + 10 8.68e-07 TTTTCTTTT TCgaatggaat chr7:59219126-59219145 - 9 8.68e-07 A TCGAATGGAAT TGAATGGA chr7:59201216-59201235 - 9 8.68e-07 T TCGAATGGAAT TGAATGAA chr7:58348730-58348749 - 9 8.68e-07 A TCGAATGGAAT CATCGAAA chr7:58311351-58311370 - 1 8.68e-07 CTTTCTTTT TCGAATGGAAT chr1:142226894-142226913 + 10 8.68e-07 caaatacaa tcgaatggaat chr1:129129973-129129992 + 10 8.68e-07 tgaatggac tcgaatggaat chr1:129004443-129004462 + 10 8.68e-07 TTTTCTTTT TCgaatggaat chr1:128901461-128901480 - 1 8.68e-07 TTTTCTTTT TCGAATGGAAT chr1:128879823-128879842 - 1 8.68e-07 CGAATGGAC TCGAATGGAAT chr1:128783762-128783781 - 1 8.68e-07 TTTTCTTTT TCGAATGGAAT chr1:128774783-128774802 - 4 8.68e-07 ATGGAA TCGAATGGAAT CAT chr17:22396945-22396964 - 9 1.12e-06 A TCGAATGGAGT CATCGAAT chr21:7860198-7860217 + 2 2.12e-06 a tgaaatggaat ggacttga chr21:6573730-6573749 - 6 2.12e-06 GGAA TGGAATGGAAA AAATG chr14:3411926-3411945 - 6 2.12e-06 GGAA TGGAATGGAAA AGAAT chr14:3143292-3143311 - 10 2.12e-06 . TGGAATGGAAA GACTCGAAT chr15:16446768-16446787 - 8 2.93e-06 AG TGGAAAGGAAT GGAATGG chr22:7476274-7476293 - 1 3.43e-06 GGAATGCAA TGGCATGGAAT chr21:448460-448479 - 5 3.43e-06 TGGGA TGGAGTGGAAT GGAA chr22:467693-467712 - 1 4.20e-06 GGAATGTCA TAGAATGGAAT chr7:59241775-59241794 + 3 4.20e-06 aa tggaatagaat tgatgta chr7:59165157-59165176 - 8 4.20e-06 AA TGGAATAGAAT TGATGTA chr7:59234771-59234790 - 1 4.44e-06 GAAGCATAA TGGGATGGAAT chr21:6574296-6574315 - 4 4.83e-06 ATCGCA TGTAATGGAAT GTA chr22:9063027-9063046 + 5 5.46e-06 gaaa tggaatgaaat ggagt chr22:8460650-8460669 + 2 5.46e-06 g tggaatgaaat ggagtgga chr14:3960680-3960699 - 5 5.46e-06 AGGAA TGGAACGGAAT CGAA chr1:128891286-128891305 - 3 7.27e-06 ATTGGCC TCAAATGGAAT TA chr22:16949030-16949049 - 7 9.12e-06 AAA TTGAATGGAAT CGAATG chr7:59889245-59889264 - 8 9.12e-06 AC TCGAAAGGAAT CATTGAA chr7:59355957-59355986 + 2 9.12e-06 c tcgaaaggAAT CATCATCATA chr7:58304019-58304038 - 5 9.12e-06 TGGAC TCGAAAGGAAT CATC chr2:89841333-89841364 + 11 9.12e-06 tctaacgaac ttgaatggaat catcatcaaa chr21:7231491-7231520 + 9 1.03e-05 gacttgat tggagtggagt ggatcacttg chr21:450103-450122 - 7 1.03e-05 GAT TGGAGTGGAGT AGAGTG chr22:478144-478163 - 4 1.13e-05 GTGGAG TAGAATGGAGT GGA chr7:59066794-59066813 - 5 1.13e-05 TGGAA TCGAATAGAAT CATC chr22:5969964-5969983 - 1 1.24e-05 GGAATGGGA TGGGATGGAGT chr22:3633662-3633681 + 3 1.24e-05 aa tggaattgaat ggagggg chr14:6300593-6300612 + 5 1.42e-05 ggaa tggaacggagt ggagt chr1:128892420-128892439 - 4 1.42e-05 ATGGAC TCGAATGAAAT CAT chr22:8477900-8477919 + 5 1.53e-05 gcaa tggaatggatt ggaaa chr21:7402524-7402543 + 5 1.53e-05 ggaa tggaatggatt ggaaa chr15:14744527-14744546 + 3 1.77e-05 aa ttgaatggagt ggattgg chr22:10452581-10452620 + 9 2.14e-05 cctgtcga aggaaaggaat tgaacggatt chr2:94658536-94658555 - 10 2.14e-05 . TGAAAGGGAAT GTTCAACTC chr2:94653434-94653453 - 10 2.14e-05 . TGAAAGGGAAT GTTCAACTC chr22:7795064-7795083 - 1 2.76e-05 TCAAAGGAA AAGAATGGAAT chr22:7476770-7476789 - 4 2.76e-05 AGACAT AAGAATGGAAT GGA chr21:7402014-7402033 + 7 2.76e-05 aaccat aagaatggaat gga chr14:5944249-5944268 + 7 2.76e-05 aaccat aagaatggaat gga chr14:3961203-3961222 - 4 2.76e-05 AACCAT AAGAATGGAAT GGA chr14:3142470-3142489 - 1 2.76e-05 GGAGTGGAG TGGAGGGGAAT chr13:11080047-11080066 - 4 2.76e-05 AACCAT AAGAATGGAAT GGA chr1:127715231-127715250 - 4 2.76e-05 AACCGT AAGAATGGAAT GGA chr16:35289424-35289443 - 2 3.11e-05 TAGATTGT TGGAAGAGAAT T chr16:34236910-34236929 + 9 3.11e-05 tagattga tggaagagaat t chr16:33893787-33893806 - 7 3.11e-05 TGT TGGAAGAGAAT TGAGAG chr16:33492794-33492813 + 9 3.11e-05 tagattga tggaagagaat t chr16:33245879-33245898 + 9 3.11e-05 tagattga tggaagagaat t chr16:33205981-33206000 - 2 3.11e-05 TAGATTGA TGGAAGAGAAT T chr2:91602648-91602667 - 9 3.11e-05 A TGGAAAAGAAT TGAATAAT chr22:11581841-11581860 - 8 4.00e-05 AA TGAAATGAAAT GATCAAA chr14:8495631-8495650 + 7 4.00e-05 aaatgg tgaaatgaaat gaa chr13:11374236-11374255 - 2 4.00e-05 GAGAATAG TGGATTGGAAT G chr14:749894-749913 - 5 4.28e-05 TGGAG TGTAGTGGAAT GGAG chr14:4964339-4964358 - 6 4.73e-05 CGAA TGTAATAGAAT GCAAT chr22:11381967-11381986 + 1 5.56e-05 . tggaatgggga aaaatggaa chr17:22291968-22291987 - 9 5.56e-05 A ACGAAGGGAAT CATCATCG chr16:35280352-35280377 - 10 5.56e-05 ATCATA TGGAATGGGGA AAAATGGAA chr16:33884752-33884777 - 10 5.56e-05 ATCATA TGGAATGGGGA AAAATGGAA chr15:20083154-20083173 - 4 5.56e-05 ATCATA TGGAATGGGGA AAA chr14:3143361-3143380 - 6 5.56e-05 GGAA TCAAAAGGAAT GGCAT chr7:59172157-59172192 + 8 5.56e-05 aatgtac tcaaaaggaat catcATCATT chr2:91751512-91751531 + 1 5.56e-05 . tggaatgggga aaaatggaa chr2:90801859-90801878 - 10 5.56e-05 . TGGAATGGGGA AAAATGGAA chr2:90058307-90058326 + 1 5.56e-05 . tggaatgggga aaaatggaa chr2:89683047-89683066 - 10 5.56e-05 . TGGAATGGGGA AAAATGGAA chr7:60022950-60022969 + 8 6.14e-05 aatggac tcaagtggaat ca chr7:59858085-59858104 - 3 6.14e-05 AATGGAC TCAAGTGGAAT CA chr21:8124755-8124774 + 9 6.88e-05 aaataaac acgaatagaat g chr7:59074205-59074224 - 9 6.88e-05 C ACGAATAGAAT CATCATCG chr7:58685041-58685060 + 2 6.88e-05 c acgaatagaat catcatcg chr21:8636081-8636100 + 4 8.00e-05 ttt tgagatggagt ttcatt chr8:12353219-12353238 - 2 8.00e-05 TTGTTTTA TGAGATGGAGT C chr7:145088150-145088169 - 6 8.00e-05 AAGA TGAGATGGAGT TTCGC chr7:59239972-59239997 - 1 8.00e-05 CTTTCAATCG TCGAATGGCAT chr1:126919265-126919284 - 8 8.00e-05 AA TGGAATTGAAA GTAATCT chr22:5969652-5969671 - 2 8.49e-05 AAGAGGAA GGGAATGGGAT G chr13:10282915-10282934 - 8 9.36e-05 AA ACGAACGGAAT GGAATGG chr7:58692426-58692445 + 6 9.99e-05 tgcaa tagaattgaat tatc chr7:58298077-58298096 - 10 9.99e-05 . TTGAACGGAAT TATCCAATG chr21:9140882-9140901 + 1 1.06e-04 . tggagcggagt gcagtggag chr17:22433362-22433381 + 6 1.06e-04 aggaa tggaccggaat ggaa chr15:16365669-16365688 + 7 1.24e-04 aaggta aggaatgcaat gga chr17:27723863-27723882 + 6 1.36e-04 tggaa ttgactggaat ggaa chr22:12793922-12793942 + 11 1.47e-04 AGACGTAATT Tcgaaaagagt chr22:9729690-9729709 + 6 1.47e-04 cggag tggagtgggaa gaat chr13:10281606-10281625 - 8 1.47e-04 AG TGGAGTGCAAT GGAGTGC chr1:103656644-103656666 - 7 1.61e-04 AAGTGG GCAAATGGAAT ACAGCA chr1:103581663-103581685 + 7 1.61e-04 AAGTGG GCAAatggaat acagca chr1:128902010-128902029 + 9 1.75e-04 tgcttagc aagcatggaat t chr7:60006535-60006554 + 7 1.90e-04 atcgaa tggacttgaat gta chr7:58297204-58297223 + 9 2.04e-04 atcgaata tggaatcaaat g chr2:96586345-96586364 - 4 2.04e-04 GAAATA TGTAAGGGAAA AAT chr16:33221175-33221194 - 9 2.19e-04 A TGAAATGAGAT GAAAAGAT chr7:59146508-59146540 + 23 2.19e-04 aatgaaatga tgaaatgagat chr22:8510893-8510912 - 4 2.34e-04 AATATG TGTCAAGGAAT TTA chr22:7766460-7766479 + 9 2.34e-04 agtatatg tgtcaaggaat t chr22:3654961-3654980 - 4 2.34e-04 TATATG TGTCAAGGAAT TTA chr22:439188-439207 + 9 2.34e-04 agtatatg tgtcaaggaat t chr16:35346943-35346962 + 10 2.34e-04 atgatgaga tgaagtgaaat chr7:59223358-59223377 - 1 2.82e-04 GAATGGAAT TATCATGGAAT chr2:91602084-91602103 - 5 2.82e-04 TTGAA TGGACTCGAAT GGAA chr1:103680615-103680634 + 10 2.82e-04 aggaattag aggcatggaga chr1:103651827-103651846 - 1 2.82e-04 AGGAATTAG AGGCATGGAGA chr1:103557683-103557702 - 1 2.82e-04 AGGAATTAG AGGCATGGAGA chr22:11476049-11476070 + 2 3.81e-04 t tgagaaggagt ctcactcact chr15:21553423-21553442 + 4 3.81e-04 ggt tgagatggggt ttctcc chr17:23099449-23099468 - 5 4.68e-04 ATACG TGGCATGGTGT ACCG chr14:8397963-8397982 + 7 4.68e-04 aaatga tgtgatgaaat gaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:11607069-11607088 3.1e-07 8_[-6]_1 chr22:11309935-11309969 3.1e-07 14_[+6]_10 chr22:9749246-9749265 3.1e-07 8_[+6]_1 chr22:9749147-9749180 3.1e-07 22_[+6]_1 chr22:9730319-9730338 3.1e-07 4_[+6]_5 chr22:9076994-9077013 3.1e-07 8_[+6]_1 chr22:9076929-9076948 3.1e-07 3_[+6]_6 chr22:6428235-6428269 3.1e-07 10_[-6]_14 chr22:5985707-5985726 3.1e-07 5_[-6]_4 chr22:3620011-3620030 3.1e-07 3_[+6]_6 chr21:9224405-9224424 3.1e-07 5_[-6]_4 chr21:8832845-8832864 3.1e-07 8_[-6]_1 chr21:7125078-7125097 3.1e-07 9_[+6] chr17:22534145-22534164 3.1e-07 1_[+6]_8 chr14:9249860-9249879 3.1e-07 9_[+6] chr14:8865761-8865780 3.1e-07 6_[-6]_3 chr14:8830290-8830309 3.1e-07 8_[-6]_1 chr14:8372890-8372909 3.1e-07 1_[+6]_8 chr14:8344902-8344921 3.1e-07 3_[+6]_6 chr14:5944780-5944799 3.1e-07 5_[+6]_4 chr13:12098575-12098594 3.1e-07 5_[-6]_4 chr13:11743410-11743429 3.1e-07 8_[-6]_1 chr13:11313554-11313573 3.1e-07 2_[-6]_7 chr7:59298734-59298776 3.1e-07 24_[+6]_8 chr22:16961131-16961164 8.7e-07 13_[-6]_10 chr22:9748569-9748612 8.7e-07 4_[+6]_29 chr22:9076079-9076100 8.7e-07 9_[+6]_2 chr22:7833620-7833639 8.7e-07 9_[-6] chr22:5998419-5998438 8.7e-07 1_[-6]_8 chr22:470112-470131 8.7e-07 6_[-6]_3 chr21:10950356-10950375 8.7e-07 4_[-6]_5 chr21:8727550-8727569 8.7e-07 4_[+6]_5 chr21:456871-456890 8.7e-07 6_[-6]_3 chr17:22398572-22398591 8.7e-07 [-6]_9 chr17:22293678-22293697 8.7e-07 [-6]_9 chr15:342506-342525 8.7e-07 6_[-6]_3 chr13:5106504-5106523 8.7e-07 3_[+6]_6 chr7:60013913-60013952 8.7e-07 16_[+6]_13 chr7:59285900-59285919 8.7e-07 9_[+6] chr7:59219126-59219145 8.7e-07 8_[-6]_1 chr7:59201216-59201235 8.7e-07 8_[-6]_1 chr7:58348730-58348749 8.7e-07 8_[-6]_1 chr7:58311351-58311370 8.7e-07 [-6]_9 chr1:142226894-142226913 8.7e-07 9_[+6] chr1:129129973-129129992 8.7e-07 9_[+6] chr1:129004443-129004462 8.7e-07 9_[+6] chr1:128901461-128901480 8.7e-07 [-6]_9 chr1:128879823-128879842 8.7e-07 [-6]_9 chr1:128783762-128783781 8.7e-07 [-6]_9 chr1:128774783-128774802 8.7e-07 3_[-6]_6 chr17:22396945-22396964 1.1e-06 8_[-6]_1 chr21:7860198-7860217 2.1e-06 1_[+6]_8 chr21:6573730-6573749 2.1e-06 5_[-6]_4 chr14:3411926-3411945 2.1e-06 5_[-6]_4 chr14:3143292-3143311 2.1e-06 9_[-6] chr15:16446768-16446787 2.9e-06 7_[-6]_2 chr22:7476274-7476293 3.4e-06 [-6]_9 chr21:448460-448479 3.4e-06 4_[-6]_5 chr22:467693-467712 4.2e-06 [-6]_9 chr7:59241775-59241794 4.2e-06 2_[+6]_7 chr7:59165157-59165176 4.2e-06 7_[-6]_2 chr7:59234771-59234790 4.4e-06 [-6]_9 chr21:6574296-6574315 4.8e-06 3_[-6]_6 chr22:9063027-9063046 5.5e-06 4_[+6]_5 chr22:8460650-8460669 5.5e-06 1_[+6]_8 chr14:3960680-3960699 5.5e-06 4_[-6]_5 chr1:128891286-128891305 7.3e-06 2_[-6]_7 chr22:16949030-16949049 9.1e-06 6_[-6]_3 chr7:59889245-59889264 9.1e-06 7_[-6]_2 chr7:59355957-59355986 9.1e-06 1_[+6]_18 chr7:58304019-58304038 9.1e-06 4_[-6]_5 chr2:89841333-89841364 9.1e-06 10_[+6]_11 chr21:7231491-7231520 1e-05 8_[+6]_11 chr21:450103-450122 1e-05 6_[-6]_3 chr22:478144-478163 1.1e-05 3_[-6]_6 chr7:59066794-59066813 1.1e-05 4_[-6]_5 chr22:5969964-5969983 1.2e-05 [-6]_9 chr22:3633662-3633681 1.2e-05 2_[+6]_7 chr14:6300593-6300612 1.4e-05 4_[+6]_5 chr1:128892420-128892439 1.4e-05 3_[-6]_6 chr22:8477900-8477919 1.5e-05 4_[+6]_5 chr21:7402524-7402543 1.5e-05 4_[+6]_5 chr15:14744527-14744546 1.8e-05 2_[+6]_7 chr22:10452581-10452620 2.1e-05 8_[+6]_21 chr2:94658536-94658555 2.1e-05 9_[-6] chr2:94653434-94653453 2.1e-05 9_[-6] chr22:7795064-7795083 2.8e-05 [-6]_9 chr22:7476770-7476789 2.8e-05 3_[-6]_6 chr21:7402014-7402033 2.8e-05 6_[+6]_3 chr14:5944249-5944268 2.8e-05 6_[+6]_3 chr14:3961203-3961222 2.8e-05 3_[-6]_6 chr14:3142470-3142489 2.8e-05 [-6]_9 chr13:11080047-11080066 2.8e-05 3_[-6]_6 chr1:127715231-127715250 2.8e-05 3_[-6]_6 chr16:35289424-35289443 3.1e-05 1_[-6]_8 chr16:34236910-34236929 3.1e-05 8_[+6]_1 chr16:33893787-33893806 3.1e-05 6_[-6]_3 chr16:33492794-33492813 3.1e-05 8_[+6]_1 chr16:33245879-33245898 3.1e-05 8_[+6]_1 chr16:33205981-33206000 3.1e-05 1_[-6]_8 chr2:91602648-91602667 3.1e-05 8_[-6]_1 chr22:11581841-11581860 4e-05 7_[-6]_2 chr14:8495631-8495650 4e-05 6_[+6]_3 chr13:11374236-11374255 4e-05 1_[-6]_8 chr14:749894-749913 4.3e-05 4_[-6]_5 chr14:4964339-4964358 4.7e-05 5_[-6]_4 chr22:11381967-11381986 5.6e-05 [+6]_9 chr17:22291968-22291987 5.6e-05 8_[-6]_1 chr16:35280352-35280377 5.6e-05 9_[-6]_6 chr16:33884752-33884777 5.6e-05 9_[-6]_6 chr15:20083154-20083173 5.6e-05 3_[-6]_6 chr14:3143361-3143380 5.6e-05 5_[-6]_4 chr7:59172157-59172192 5.6e-05 7_[+6]_18 chr2:91751512-91751531 5.6e-05 [+6]_9 chr2:90801859-90801878 5.6e-05 9_[-6] chr2:90058307-90058326 5.6e-05 [+6]_9 chr2:89683047-89683066 5.6e-05 9_[-6] chr7:60022950-60022969 6.1e-05 7_[+6]_2 chr7:59858085-59858104 6.1e-05 2_[-6]_7 chr21:8124755-8124774 6.9e-05 8_[+6]_1 chr7:59074205-59074224 6.9e-05 8_[-6]_1 chr7:58685041-58685060 6.9e-05 1_[+6]_8 chr21:8636081-8636100 8e-05 3_[+6]_6 chr8:12353219-12353238 8e-05 1_[-6]_8 chr7:145088150-145088169 8e-05 5_[-6]_4 chr7:59239972-59239997 8e-05 [-6]_15 chr1:126919265-126919284 8e-05 7_[-6]_2 chr22:5969652-5969671 8.5e-05 1_[-6]_8 chr13:10282915-10282934 9.4e-05 7_[-6]_2 chr7:58692426-58692445 0.0001 5_[+6]_4 chr7:58298077-58298096 0.0001 9_[-6] chr21:9140882-9140901 0.00011 [+6]_9 chr17:22433362-22433381 0.00011 5_[+6]_4 chr15:16365669-16365688 0.00012 6_[+6]_3 chr17:27723863-27723882 0.00014 5_[+6]_4 chr22:12793922-12793942 0.00015 10_[+6] chr22:9729690-9729709 0.00015 5_[+6]_4 chr13:10281606-10281625 0.00015 7_[-6]_2 chr1:103656644-103656666 0.00016 6_[-6]_6 chr1:103581663-103581685 0.00016 6_[+6]_6 chr1:128902010-128902029 0.00017 8_[+6]_1 chr7:60006535-60006554 0.00019 6_[+6]_3 chr7:58297204-58297223 0.0002 8_[+6]_1 chr2:96586345-96586364 0.0002 3_[-6]_6 chr16:33221175-33221194 0.00022 8_[-6]_1 chr7:59146508-59146540 0.00022 22_[+6] chr22:8510893-8510912 0.00023 3_[-6]_6 chr22:7766460-7766479 0.00023 8_[+6]_1 chr22:3654961-3654980 0.00023 3_[-6]_6 chr22:439188-439207 0.00023 8_[+6]_1 chr16:35346943-35346962 0.00023 9_[+6] chr7:59223358-59223377 0.00028 [-6]_9 chr2:91602084-91602103 0.00028 4_[-6]_5 chr1:103680615-103680634 0.00028 9_[+6] chr1:103651827-103651846 0.00028 [-6]_9 chr1:103557683-103557702 0.00028 [-6]_9 chr22:11476049-11476070 0.00038 1_[+6]_10 chr15:21553423-21553442 0.00038 3_[+6]_6 chr17:23099449-23099468 0.00047 4_[-6]_5 chr14:8397963-8397982 0.00047 6_[+6]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGAATGGAAT width=11 seqs=160 chr22:11607069-11607088 ( 9) TGGAATGGAAT 1 chr22:11309935-11309969 ( 15) TGGAATGGAAT 1 chr22:9749246-9749265 ( 9) TGGAATGGAAT 1 chr22:9749147-9749180 ( 23) TGGAATGGAAT 1 chr22:9730319-9730338 ( 5) TGGAATGGAAT 1 chr22:9076994-9077013 ( 9) TGGAATGGAAT 1 chr22:9076929-9076948 ( 4) TGGAATGGAAT 1 chr22:6428235-6428269 ( 11) TGGAATGGAAT 1 chr22:5985707-5985726 ( 6) TGGAATGGAAT 1 chr22:3620011-3620030 ( 4) TGGAATGGAAT 1 chr21:9224405-9224424 ( 6) TGGAATGGAAT 1 chr21:8832845-8832864 ( 9) TGGAATGGAAT 1 chr21:7125078-7125097 ( 10) TGGAATGGAAT 1 chr17:22534145-22534164 ( 2) TGGAATGGAAT 1 chr14:9249860-9249879 ( 10) TGGAATGGAAT 1 chr14:8865761-8865780 ( 7) TGGAATGGAAT 1 chr14:8830290-8830309 ( 9) TGGAATGGAAT 1 chr14:8372890-8372909 ( 2) TGGAATGGAAT 1 chr14:8344902-8344921 ( 4) TGGAATGGAAT 1 chr14:5944780-5944799 ( 6) TGGAATGGAAT 1 chr13:12098575-12098594 ( 6) TGGAATGGAAT 1 chr13:11743410-11743429 ( 9) TGGAATGGAAT 1 chr13:11313554-11313573 ( 3) TGGAATGGAAT 1 chr7:59298734-59298776 ( 25) TGGAATGGAAT 1 chr22:16961131-16961164 ( 14) TCGAATGGAAT 1 chr22:9748569-9748612 ( 5) TGGAATGGAGT 1 chr22:9076079-9076100 ( 10) TGGAATGGAGT 1 chr22:7833620-7833639 ( 10) TGGAATGGAGT 1 chr22:5998419-5998438 ( 2) TGGAATGGAGT 1 chr22:470112-470131 ( 7) TGGAATGGAGT 1 chr21:10950356-10950375 ( 5) TGGAATGGAGT 1 chr21:8727550-8727569 ( 5) TCGAATGGAAT 1 chr21:456871-456890 ( 7) TGGAATGGAGT 1 chr17:22398572-22398591 ( 1) TCGAATGGAAT 1 chr17:22293678-22293697 ( 1) TCGAATGGAAT 1 chr15:342506-342525 ( 7) TGGAATGGAGT 1 chr13:5106504-5106523 ( 4) TGGAATGGAGT 1 chr7:60013913-60013952 ( 17) TCGAATGGAAT 1 chr7:59285900-59285919 ( 10) TCGAATGGAAT 1 chr7:59219126-59219145 ( 9) TCGAATGGAAT 1 chr7:59201216-59201235 ( 9) TCGAATGGAAT 1 chr7:58348730-58348749 ( 9) TCGAATGGAAT 1 chr7:58311351-58311370 ( 1) TCGAATGGAAT 1 chr1:142226894-142226913 ( 10) TCGAATGGAAT 1 chr1:129129973-129129992 ( 10) TCGAATGGAAT 1 chr1:129004443-129004462 ( 10) TCGAATGGAAT 1 chr1:128901461-128901480 ( 1) TCGAATGGAAT 1 chr1:128879823-128879842 ( 1) TCGAATGGAAT 1 chr1:128783762-128783781 ( 1) TCGAATGGAAT 1 chr1:128774783-128774802 ( 4) TCGAATGGAAT 1 chr17:22396945-22396964 ( 9) TCGAATGGAGT 1 chr21:7860198-7860217 ( 2) TGAAATGGAAT 1 chr21:6573730-6573749 ( 6) TGGAATGGAAA 1 chr14:3411926-3411945 ( 6) TGGAATGGAAA 1 chr14:3143292-3143311 ( 10) TGGAATGGAAA 1 chr15:16446768-16446787 ( 8) TGGAAAGGAAT 1 chr22:7476274-7476293 ( 1) TGGCATGGAAT 1 chr21:448460-448479 ( 5) TGGAGTGGAAT 1 chr22:467693-467712 ( 1) TAGAATGGAAT 1 chr7:59241775-59241794 ( 3) TGGAATAGAAT 1 chr7:59165157-59165176 ( 8) TGGAATAGAAT 1 chr7:59234771-59234790 ( 1) TGGGATGGAAT 1 chr21:6574296-6574315 ( 4) TGTAATGGAAT 1 chr22:9063027-9063046 ( 5) TGGAATGAAAT 1 chr22:8460650-8460669 ( 2) TGGAATGAAAT 1 chr14:3960680-3960699 ( 5) TGGAACGGAAT 1 chr1:128891286-128891305 ( 3) TCAAATGGAAT 1 chr22:16949030-16949049 ( 7) TTGAATGGAAT 1 chr7:59889245-59889264 ( 8) TCGAAAGGAAT 1 chr7:59355957-59355986 ( 2) TCGAAAGGAAT 1 chr7:58304019-58304038 ( 5) TCGAAAGGAAT 1 chr2:89841333-89841364 ( 11) TTGAATGGAAT 1 chr21:7231491-7231520 ( 9) TGGAGTGGAGT 1 chr21:450103-450122 ( 7) TGGAGTGGAGT 1 chr22:478144-478163 ( 4) TAGAATGGAGT 1 chr7:59066794-59066813 ( 5) TCGAATAGAAT 1 chr22:5969964-5969983 ( 1) TGGGATGGAGT 1 chr22:3633662-3633681 ( 3) TGGAATTGAAT 1 chr14:6300593-6300612 ( 5) TGGAACGGAGT 1 chr1:128892420-128892439 ( 4) TCGAATGAAAT 1 chr22:8477900-8477919 ( 5) TGGAATGGATT 1 chr21:7402524-7402543 ( 5) TGGAATGGATT 1 chr15:14744527-14744546 ( 3) TTGAATGGAGT 1 chr22:10452581-10452620 ( 9) AGGAAAGGAAT 1 chr2:94658536-94658555 ( 10) TGAAAGGGAAT 1 chr2:94653434-94653453 ( 10) TGAAAGGGAAT 1 chr22:7795064-7795083 ( 1) AAGAATGGAAT 1 chr22:7476770-7476789 ( 4) AAGAATGGAAT 1 chr21:7402014-7402033 ( 7) AAGAATGGAAT 1 chr14:5944249-5944268 ( 7) AAGAATGGAAT 1 chr14:3961203-3961222 ( 4) AAGAATGGAAT 1 chr14:3142470-3142489 ( 1) TGGAGGGGAAT 1 chr13:11080047-11080066 ( 4) AAGAATGGAAT 1 chr1:127715231-127715250 ( 4) AAGAATGGAAT 1 chr16:35289424-35289443 ( 2) TGGAAGAGAAT 1 chr16:34236910-34236929 ( 9) TGGAAGAGAAT 1 chr16:33893787-33893806 ( 7) TGGAAGAGAAT 1 chr16:33492794-33492813 ( 9) TGGAAGAGAAT 1 chr16:33245879-33245898 ( 9) TGGAAGAGAAT 1 chr16:33205981-33206000 ( 2) TGGAAGAGAAT 1 chr2:91602648-91602667 ( 9) TGGAAAAGAAT 1 chr22:11581841-11581860 ( 8) TGAAATGAAAT 1 chr14:8495631-8495650 ( 7) TGAAATGAAAT 1 chr13:11374236-11374255 ( 2) TGGATTGGAAT 1 chr14:749894-749913 ( 5) TGTAGTGGAAT 1 chr14:4964339-4964358 ( 6) TGTAATAGAAT 1 chr22:11381967-11381986 ( 1) TGGAATGGGGA 1 chr17:22291968-22291987 ( 9) ACGAAGGGAAT 1 chr16:35280352-35280377 ( 10) TGGAATGGGGA 1 chr16:33884752-33884777 ( 10) TGGAATGGGGA 1 chr15:20083154-20083173 ( 4) TGGAATGGGGA 1 chr14:3143361-3143380 ( 6) TCAAAAGGAAT 1 chr7:59172157-59172192 ( 8) TCAAAAGGAAT 1 chr2:91751512-91751531 ( 1) TGGAATGGGGA 1 chr2:90801859-90801878 ( 10) TGGAATGGGGA 1 chr2:90058307-90058326 ( 1) TGGAATGGGGA 1 chr2:89683047-89683066 ( 10) TGGAATGGGGA 1 chr7:60022950-60022969 ( 8) TCAAGTGGAAT 1 chr7:59858085-59858104 ( 3) TCAAGTGGAAT 1 chr21:8124755-8124774 ( 9) ACGAATAGAAT 1 chr7:59074205-59074224 ( 9) ACGAATAGAAT 1 chr7:58685041-58685060 ( 2) ACGAATAGAAT 1 chr21:8636081-8636100 ( 4) TGAGATGGAGT 1 chr8:12353219-12353238 ( 2) TGAGATGGAGT 1 chr7:145088150-145088169 ( 6) TGAGATGGAGT 1 chr7:59239972-59239997 ( 1) TCGAATGGCAT 1 chr1:126919265-126919284 ( 8) TGGAATTGAAA 1 chr22:5969652-5969671 ( 2) GGGAATGGGAT 1 chr13:10282915-10282934 ( 8) ACGAACGGAAT 1 chr7:58692426-58692445 ( 6) TAGAATTGAAT 1 chr7:58298077-58298096 ( 10) TTGAACGGAAT 1 chr21:9140882-9140901 ( 1) TGGAGCGGAGT 1 chr17:22433362-22433381 ( 6) TGGACCGGAAT 1 chr15:16365669-16365688 ( 7) AGGAATGCAAT 1 chr17:27723863-27723882 ( 6) TTGACTGGAAT 1 chr22:12793922-12793942 ( 11) TCGAAAAGAGT 1 chr22:9729690-9729709 ( 6) TGGAGTGGGAA 1 chr13:10281606-10281625 ( 8) TGGAGTGCAAT 1 chr1:103656644-103656666 ( 7) GCAAATGGAAT 1 chr1:103581663-103581685 ( 7) GCAAATGGAAT 1 chr1:128902010-128902029 ( 9) AAGCATGGAAT 1 chr7:60006535-60006554 ( 7) TGGACTTGAAT 1 chr7:58297204-58297223 ( 9) TGGAATCAAAT 1 chr2:96586345-96586364 ( 4) TGTAAGGGAAA 1 chr16:33221175-33221194 ( 9) TGAAATGAGAT 1 chr7:59146508-59146540 ( 23) TGAAATGAGAT 1 chr22:8510893-8510912 ( 4) TGTCAAGGAAT 1 chr22:7766460-7766479 ( 9) TGTCAAGGAAT 1 chr22:3654961-3654980 ( 4) TGTCAAGGAAT 1 chr22:439188-439207 ( 9) TGTCAAGGAAT 1 chr16:35346943-35346962 ( 10) TGAAGTGAAAT 1 chr7:59223358-59223377 ( 1) TATCATGGAAT 1 chr2:91602084-91602103 ( 5) TGGACTCGAAT 1 chr1:103680615-103680634 ( 10) AGGCATGGAGA 1 chr1:103651827-103651846 ( 1) AGGCATGGAGA 1 chr1:103557683-103557702 ( 1) AGGCATGGAGA 1 chr22:11476049-11476070 ( 2) TGAGAAGGAGT 1 chr15:21553423-21553442 ( 4) TGAGATGGGGT 1 chr17:23099449-23099468 ( 5) TGGCATGGTGT 1 chr14:8397963-8397982 ( 7) TGTGATGAAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 11 n= 28704 bayes= 8.26824 E= 1.2e-019 -130 -1397 -357 165 -189 5 157 -315 -115 -1397 187 -215 167 -170 -216 -1397 170 -315 -170 -547 -166 -257 -170 154 -156 -415 196 -347 -215 -415 205 -1397 171 -515 -145 -547 147 -1397 -3 -447 -138 -1397 -1397 169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 11 nsites= 160 E= 1.2e-019 0.112500 0.000000 0.018750 0.868750 0.075000 0.231250 0.662500 0.031250 0.125000 0.000000 0.812500 0.062500 0.881250 0.068750 0.050000 0.000000 0.900000 0.025000 0.068750 0.006250 0.087500 0.037500 0.068750 0.806250 0.093750 0.012500 0.868750 0.025000 0.062500 0.012500 0.925000 0.000000 0.906250 0.006250 0.081250 0.006250 0.768750 0.000000 0.218750 0.012500 0.106250 0.000000 0.000000 0.893750 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGAATGGAAT MEME-6 regular expression -------------------------------------------------------------------------------- T[GC]GAATGGA[AG]T -------------------------------------------------------------------------------- Time 132.32 secs. ******************************************************************************** ******************************************************************************** MOTIF GMCTGSRCCTG MEME-7 width = 11 sites = 125 llr = 1122 E-value = 2.1e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 Description -------------------------------------------------------------------------------- Simplified A 13::::31:2: pos.-specific C :69:36269:3 probability G 9:::7443117 matrix T ::1a::1::7: bits 2.2 1.9 * 1.7 * ** 1.5 * ** * Relative 1.3 * *** * Entropy 1.1 ****** * * (13.0 bits) 0.9 ****** ** * 0.6 ****** **** 0.4 ****** **** 0.2 *********** 0.0 ----------- Multilevel GCCTGCGCCTG consensus A CGAG AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------- chr22:6366342-6366361 + 4 3.37e-06 gca gcctggacctc actcca chr16:35122963-35122988 - 13 3.37e-06 GCA GCCTGGACCTC TCTCCATATG chr16:35084800-35084819 - 7 3.37e-06 GCA GCCTGGACCTC CCTCCA chr16:34863407-34863426 - 7 3.37e-06 GCA GCCTGGACCTC TCTCCA chr16:34756599-34756618 + 4 3.37e-06 gca gcctggacctc ccTCCA chr16:34718505-34718524 + 4 3.37e-06 gca gcctggacctc tcTCCA chr16:33689336-33689355 - 7 3.37e-06 GCA GCCTGGACCTC CCTCCA chr2:92063577-92063596 - 7 3.37e-06 GCA GCCTGGACCTC ACTCTA chr22:10689494-10689513 + 1 5.18e-06 . gactgcagctg aaatgtggg chr21:10551407-10551468 - 5 5.50e-06 GCCTCTCCGC GCCTGCGCCGG CGCC chr14:6658663-6658724 + 48 5.50e-06 gcctctccgc gcctgcgccgg cgcc chr13:13473559-13473611 - 5 5.50e-06 GCCTCTCCGC GCCTGCGCCGG CGCC chr9:80343632-80343651 - 5 5.50e-06 TCCGC GCCTGCGCCGG CGCC chr9:80192688-80192729 + 28 5.50e-06 gcctctccgc gcctgcgccgg cgcc chr9:76972965-76973013 - 12 5.50e-06 GCCTCTCTGC GCCTGCGCCGG CGCTGTGGGC chr9:40801060-40801079 + 6 5.50e-06 tccgc gcctgcgccgg cgcc chr8:86910196-86910215 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86885953-86885972 + 1 7.89e-06 . gactgggccag cagtctgTT chr8:86861712-86861731 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86813230-86813249 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86740215-86740234 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86715836-86715855 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86243430-86243449 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86182477-86182496 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86158099-86158118 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86145909-86145928 + 1 7.89e-06 . gactgggccag cagtctgCT chr8:86109479-86109498 + 1 7.89e-06 . gactgggccag cagtctgCT chr22:10711670-10711689 - 6 8.73e-06 ACCT GCCTCGGCCTC CCAAA chr22:10552695-10552714 + 5 8.73e-06 acct gcctcggcctc ccaaa chr22:7502253-7502272 + 5 8.73e-06 acct gcctcggcctc ccaaa chr22:5868118-5868137 - 6 8.73e-06 ACCT GCCTCGGCCTC CCAAA chr17:38904526-38904545 + 5 8.73e-06 tcct gcctcggcctc ccgag chr9:79638667-79638686 - 9 8.73e-06 C GCCTCGGCCTC TCGAAGTG chr9:77925874-77925893 + 2 8.73e-06 c gcctcggcctc tcgaagtg chr9:43062561-43062580 + 2 8.73e-06 c gcctcggcctc tcgaagtg chr9:40234843-40234862 - 9 8.73e-06 C GCCTCGGCCTC TCGAAGTG chr21:197470-197489 - 7 1.22e-05 GGT GCCTGGAACTG ACTCCA chr21:190334-190353 - 7 1.22e-05 GGT GCCTGGAACTG ACTCCA chr21:183194-183213 - 7 1.22e-05 GGT GCCTGGAACTG ACTCCA chr21:176054-176073 - 7 1.22e-05 GGT GCCTGGAACTG ACTCCA chr1:143645816-143645853 - 10 1.22e-05 GACACCAAGA GCCTGGAACTG CACCAAAAA chr22:9831175-9831194 - 10 1.62e-05 . GACTCCAGCTG AAATGTGGG chr22:9826534-9826553 + 1 1.62e-05 . gactccagctg aaatgtggg chr22:4109124-4109143 + 6 1.62e-05 gggct gactccagctg aaat chr22:4102525-4102544 + 6 1.62e-05 gggct gactccagctg aaat chr22:4004497-4004516 + 6 1.62e-05 gggct gactccagctg aaat chr22:3931874-3931893 + 6 1.62e-05 gggct gactccagctg aaat chr15:158213-158232 - 10 1.62e-05 . GACTCCAGCTG AAATCTGGG chr15:151359-151378 - 10 1.62e-05 . GACTCCAGCTG AAATGTGGG chr15:107815-107834 - 10 1.62e-05 . GACTCCAGCTG AAATGTGGG chr13:5344096-5344115 + 1 1.62e-05 . gactccagctg aaatgtggg chr17:23097265-23097284 - 9 1.96e-05 C GCCTGGCACTG GCATATAC chr17:23094893-23094912 - 9 1.96e-05 C GCCTGGCACTG GCGTATAC chr17:23071361-23071380 - 9 1.96e-05 C GCCTGGCACTG GCGTATAC chr17:23066637-23066656 - 9 1.96e-05 C GCCTGGCACTG GCGTATAC chr17:23064284-23064303 - 9 1.96e-05 C GCCTGGCACTG GCGTATAC chr20:30944708-30944727 - 6 2.26e-05 TTGT GCCTGCACCTT TGGAG chr9:80285900-80285919 + 2 2.26e-05 a gcctgggcctt ttggcctg chr9:78335653-78335672 - 9 2.26e-05 A GCCTGGGCCTT TTGGCCTG chr9:78271803-78271822 + 2 2.26e-05 a gcctgggcctt ttggcctg chr9:40859452-40859471 - 9 2.26e-05 A GCCTGGGCCTT TTGGCCTG chr2:91849709-91849728 + 7 2.26e-05 ccccgc gcctgcgcccg cgc chr2:90147838-90147857 + 7 2.26e-05 ccccgc gcctgcgcccg cgc chr22:3852254-3852273 + 1 2.47e-05 . gactcccgctg aagtgtggg chr20:29991701-29991720 + 8 2.47e-05 tggaact gactcccgctg aa chr19:39999530-39999549 - 3 2.47e-05 AGGGGCT GCCTGCGGGTG GG chr19:39976811-39976830 - 3 2.47e-05 AGGGGCT GCCTGCGGGTG GG chr19:39951535-39951554 - 3 2.47e-05 AGGGGCT GCCTGCGGGTG GG chr19:39946461-39946480 - 3 2.47e-05 AGGGGCT GCCTGCGGGTG GG chr14:5888111-5888130 + 1 2.47e-05 . gactcccgctg aaatctggg chr14:4082765-4082784 + 1 2.47e-05 . gactcccgctg aaatctggg chr14:213708-213727 - 10 2.47e-05 . GACTCCCGCTG GAATCTGGG chr14:157126-157145 - 10 2.47e-05 . GACTCCCGCTG GAATCTGGG chr14:13241684-13241703 - 3 3.38e-05 ATAATAA GCCTGGGCATG GT chr8:12383139-12383158 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:12156817-12156836 + 10 3.38e-05 ctgtctcct gcttgcccctg chr8:11827275-11827294 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:11811979-11811998 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:11773739-11773758 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:11766091-11766110 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:11750795-11750814 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:11712555-11712574 - 2 3.38e-05 TGTCTCCT GCTTGCCCCTG G chr8:7336330-7336349 + 10 3.38e-05 ctgtctcct gcttgcccctg chr1:12663105-12663124 - 9 3.38e-05 T GACTGGGCGTG GTGGTGCA chr12:37371854-37371873 + 8 3.64e-05 agcagtg gcctgccccgc tt chr22:5749454-5749473 - 10 4.01e-05 . GACTCCAGCTC CACCTAACT chr15:5292598-5292638 - 31 4.01e-05 . GACTCCAGCTC CACCTAACTG chr14:2875555-2875574 - 10 4.01e-05 . GACTCCAGCTC CACCTAACT chr13:10020799-10020839 - 31 4.01e-05 . GACTCCAGCTC CACCTAACTG chr16:35281686-35281706 + 8 4.57e-05 tgacaga gactgcagcac gac chr16:35121628-35121647 - 3 4.57e-05 TGACAGA GACTGCAGCAC GA chr16:34862066-34862085 - 3 4.57e-05 TGACAGA GACTGCAGCAC GA chr16:34719846-34719865 + 8 4.57e-05 tgacaga gactgcagcac ga chr16:33886085-33886104 + 8 4.57e-05 tgacaga gactgcagcac ga chr16:33726136-33726155 - 3 4.57e-05 TGACAGA GACTGCAGCAC GA chr15:137226-137245 - 10 4.96e-05 . GACTCCAACTG AAATCTGGG chr15:129959-129978 - 10 4.96e-05 . GACTCCAACTG AAATCTGGG chr15:115103-115122 - 10 4.96e-05 . GACTCCAACTG AAATCTGGG chr21:10547820-10547839 + 1 5.95e-05 . acctgctcctg aatgagcac chr20:29708925-29708944 + 5 5.95e-05 ttgt gcctgcACCAT TGGAG chr15:17154843-17154862 + 1 5.95e-05 . acctgctcctg aatgagcac chr14:6662285-6662304 - 10 5.95e-05 . ACCTGCTCCTG AATGAGCAC chr13:13469979-13469998 + 1 5.95e-05 . acctgctcctg aatgagcac chr9:80340010-80340029 + 1 5.95e-05 . acctgctcctg aatgagcac chr9:80196263-80196282 - 10 5.95e-05 . ACCTGCTCCTG AATGAGCAC chr9:47781769-47781788 - 10 5.95e-05 . ACCTGCTCCTG AATGAGCAC chr9:42017299-42017318 + 1 5.95e-05 . acctgctcctg aatgagcac chr9:40804628-40804647 - 10 5.95e-05 . ACCTGCTCCTG AATGAGCAC chr19:38974748-38974767 + 8 6.52e-05 aggggct gcctgcgggag gg chr19:38962127-38962146 + 8 6.52e-05 aggggct gcctgcgggag gg chr19:38957083-38957102 + 8 6.52e-05 aggggct gcctgcgggag gg chr19:38914043-38914062 + 8 6.52e-05 aggggct gcctgcgggag gg chr9:47778182-47778224 + 28 6.98e-05 gcctctccgc gcctgggcccc ctccg chr22:11290051-11290070 + 2 8.52e-05 a ggctgcaccag atgGAAAT chr2:97915589-97915608 - 6 8.52e-05 ACCC ACCTCGGCCTC CCAAA chr2:97806150-97806169 + 5 8.52e-05 accc acctcggcctc ccaaa chr2:97587617-97587636 - 4 8.52e-05 CATCCC ACCTCGGCCTC CAG chr22:11484507-11484526 + 2 1.09e-04 g ggctggaccag atgGAAAT chr14:8706823-8706842 + 2 1.09e-04 g ggctggaccag atgGAAAT chr16:34612673-34612692 - 7 1.46e-04 TGT GCCTGGCCAAG AATTTA chr15:21465184-21465203 + 6 1.58e-04 gcccg gcctgcacagg gtaa chr19:50739675-50739694 + 5 1.71e-04 accg gcctgcccttg aattg chr16:28780059-28780078 - 9 1.71e-04 A GCCTGGGCAAC ACAGGCAG chr13:10077435-10077454 + 10 2.39e-04 Actttctgc acctgctccgg chr1:143503300-143503319 + 10 2.76e-04 cctgttggg aactgcgcatg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:6366342-6366361 3.4e-06 3_[+7]_6 chr16:35122963-35122988 3.4e-06 12_[-7]_3 chr16:35084800-35084819 3.4e-06 6_[-7]_3 chr16:34863407-34863426 3.4e-06 6_[-7]_3 chr16:34756599-34756618 3.4e-06 3_[+7]_6 chr16:34718505-34718524 3.4e-06 3_[+7]_6 chr16:33689336-33689355 3.4e-06 6_[-7]_3 chr2:92063577-92063596 3.4e-06 6_[-7]_3 chr22:10689494-10689513 5.2e-06 [+7]_9 chr21:10551407-10551468 5.5e-06 4_[-7]_47 chr14:6658663-6658724 5.5e-06 47_[+7]_4 chr13:13473559-13473611 5.5e-06 4_[-7]_38 chr9:80343632-80343651 5.5e-06 4_[-7]_5 chr9:80192688-80192729 5.5e-06 27_[+7]_4 chr9:76972965-76973013 5.5e-06 11_[-7]_27 chr9:40801060-40801079 5.5e-06 5_[+7]_4 chr8:86910196-86910215 7.9e-06 [+7]_9 chr8:86885953-86885972 7.9e-06 [+7]_9 chr8:86861712-86861731 7.9e-06 [+7]_9 chr8:86813230-86813249 7.9e-06 [+7]_9 chr8:86740215-86740234 7.9e-06 [+7]_9 chr8:86715836-86715855 7.9e-06 [+7]_9 chr8:86243430-86243449 7.9e-06 [+7]_9 chr8:86182477-86182496 7.9e-06 [+7]_9 chr8:86158099-86158118 7.9e-06 [+7]_9 chr8:86145909-86145928 7.9e-06 [+7]_9 chr8:86109479-86109498 7.9e-06 [+7]_9 chr22:10711670-10711689 8.7e-06 5_[-7]_4 chr22:10552695-10552714 8.7e-06 4_[+7]_5 chr22:7502253-7502272 8.7e-06 4_[+7]_5 chr22:5868118-5868137 8.7e-06 5_[-7]_4 chr17:38904526-38904545 8.7e-06 4_[+7]_5 chr9:79638667-79638686 8.7e-06 8_[-7]_1 chr9:77925874-77925893 8.7e-06 1_[+7]_8 chr9:43062561-43062580 8.7e-06 1_[+7]_8 chr9:40234843-40234862 8.7e-06 8_[-7]_1 chr21:197470-197489 1.2e-05 6_[-7]_3 chr21:190334-190353 1.2e-05 6_[-7]_3 chr21:183194-183213 1.2e-05 6_[-7]_3 chr21:176054-176073 1.2e-05 6_[-7]_3 chr1:143645816-143645853 1.2e-05 9_[-7]_18 chr22:9831175-9831194 1.6e-05 9_[-7] chr22:9826534-9826553 1.6e-05 [+7]_9 chr22:4109124-4109143 1.6e-05 5_[+7]_4 chr22:4102525-4102544 1.6e-05 5_[+7]_4 chr22:4004497-4004516 1.6e-05 5_[+7]_4 chr22:3931874-3931893 1.6e-05 5_[+7]_4 chr15:158213-158232 1.6e-05 9_[-7] chr15:151359-151378 1.6e-05 9_[-7] chr15:107815-107834 1.6e-05 9_[-7] chr13:5344096-5344115 1.6e-05 [+7]_9 chr17:23097265-23097284 2e-05 8_[-7]_1 chr17:23094893-23094912 2e-05 8_[-7]_1 chr17:23071361-23071380 2e-05 8_[-7]_1 chr17:23066637-23066656 2e-05 8_[-7]_1 chr17:23064284-23064303 2e-05 8_[-7]_1 chr20:30944708-30944727 2.3e-05 5_[-7]_4 chr9:80285900-80285919 2.3e-05 1_[+7]_8 chr9:78335653-78335672 2.3e-05 8_[-7]_1 chr9:78271803-78271822 2.3e-05 1_[+7]_8 chr9:40859452-40859471 2.3e-05 8_[-7]_1 chr2:91849709-91849728 2.3e-05 6_[+7]_3 chr2:90147838-90147857 2.3e-05 6_[+7]_3 chr22:3852254-3852273 2.5e-05 [+7]_9 chr20:29991701-29991720 2.5e-05 7_[+7]_2 chr19:39999530-39999549 2.5e-05 2_[-7]_7 chr19:39976811-39976830 2.5e-05 2_[-7]_7 chr19:39951535-39951554 2.5e-05 2_[-7]_7 chr19:39946461-39946480 2.5e-05 2_[-7]_7 chr14:5888111-5888130 2.5e-05 [+7]_9 chr14:4082765-4082784 2.5e-05 [+7]_9 chr14:213708-213727 2.5e-05 9_[-7] chr14:157126-157145 2.5e-05 9_[-7] chr14:13241684-13241703 3.4e-05 2_[-7]_7 chr8:12383139-12383158 3.4e-05 1_[-7]_8 chr8:12156817-12156836 3.4e-05 9_[+7] chr8:11827275-11827294 3.4e-05 1_[-7]_8 chr8:11811979-11811998 3.4e-05 1_[-7]_8 chr8:11773739-11773758 3.4e-05 1_[-7]_8 chr8:11766091-11766110 3.4e-05 1_[-7]_8 chr8:11750795-11750814 3.4e-05 1_[-7]_8 chr8:11712555-11712574 3.4e-05 1_[-7]_8 chr8:7336330-7336349 3.4e-05 9_[+7] chr1:12663105-12663124 3.4e-05 8_[-7]_1 chr12:37371854-37371873 3.6e-05 7_[+7]_2 chr22:5749454-5749473 4e-05 9_[-7] chr15:5292598-5292638 4e-05 30_[-7] chr14:2875555-2875574 4e-05 9_[-7] chr13:10020799-10020839 4e-05 30_[-7] chr16:35281686-35281706 4.6e-05 7_[+7]_3 chr16:35121628-35121647 4.6e-05 2_[-7]_7 chr16:34862066-34862085 4.6e-05 2_[-7]_7 chr16:34719846-34719865 4.6e-05 7_[+7]_2 chr16:33886085-33886104 4.6e-05 7_[+7]_2 chr16:33726136-33726155 4.6e-05 2_[-7]_7 chr15:137226-137245 5e-05 9_[-7] chr15:129959-129978 5e-05 9_[-7] chr15:115103-115122 5e-05 9_[-7] chr21:10547820-10547839 6e-05 [+7]_9 chr20:29708925-29708944 6e-05 4_[+7]_5 chr15:17154843-17154862 6e-05 [+7]_9 chr14:6662285-6662304 6e-05 9_[-7] chr13:13469979-13469998 6e-05 [+7]_9 chr9:80340010-80340029 6e-05 [+7]_9 chr9:80196263-80196282 6e-05 9_[-7] chr9:47781769-47781788 6e-05 9_[-7] chr9:42017299-42017318 6e-05 [+7]_9 chr9:40804628-40804647 6e-05 9_[-7] chr19:38974748-38974767 6.5e-05 7_[+7]_2 chr19:38962127-38962146 6.5e-05 7_[+7]_2 chr19:38957083-38957102 6.5e-05 7_[+7]_2 chr19:38914043-38914062 6.5e-05 7_[+7]_2 chr9:47778182-47778224 7e-05 27_[+7]_5 chr22:11290051-11290070 8.5e-05 1_[+7]_8 chr2:97915589-97915608 8.5e-05 5_[-7]_4 chr2:97806150-97806169 8.5e-05 4_[+7]_5 chr2:97587617-97587636 8.5e-05 3_[-7]_6 chr22:11484507-11484526 0.00011 1_[+7]_8 chr14:8706823-8706842 0.00011 1_[+7]_8 chr16:34612673-34612692 0.00015 6_[-7]_3 chr15:21465184-21465203 0.00016 5_[+7]_4 chr19:50739675-50739694 0.00017 4_[+7]_5 chr16:28780059-28780078 0.00017 8_[-7]_1 chr13:10077435-10077454 0.00024 9_[+7] chr1:143503300-143503319 0.00028 9_[+7] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GMCTGSRCCTG width=11 seqs=125 chr22:6366342-6366361 ( 4) GCCTGGACCTC 1 chr16:35122963-35122988 ( 13) GCCTGGACCTC 1 chr16:35084800-35084819 ( 7) GCCTGGACCTC 1 chr16:34863407-34863426 ( 7) GCCTGGACCTC 1 chr16:34756599-34756618 ( 4) GCCTGGACCTC 1 chr16:34718505-34718524 ( 4) GCCTGGACCTC 1 chr16:33689336-33689355 ( 7) GCCTGGACCTC 1 chr2:92063577-92063596 ( 7) GCCTGGACCTC 1 chr22:10689494-10689513 ( 1) GACTGCAGCTG 1 chr21:10551407-10551468 ( 5) GCCTGCGCCGG 1 chr14:6658663-6658724 ( 48) GCCTGCGCCGG 1 chr13:13473559-13473611 ( 5) GCCTGCGCCGG 1 chr9:80343632-80343651 ( 5) GCCTGCGCCGG 1 chr9:80192688-80192729 ( 28) GCCTGCGCCGG 1 chr9:76972965-76973013 ( 12) GCCTGCGCCGG 1 chr9:40801060-40801079 ( 6) GCCTGCGCCGG 1 chr8:86910196-86910215 ( 1) GACTGGGCCAG 1 chr8:86885953-86885972 ( 1) GACTGGGCCAG 1 chr8:86861712-86861731 ( 1) GACTGGGCCAG 1 chr8:86813230-86813249 ( 1) GACTGGGCCAG 1 chr8:86740215-86740234 ( 1) GACTGGGCCAG 1 chr8:86715836-86715855 ( 1) GACTGGGCCAG 1 chr8:86243430-86243449 ( 1) GACTGGGCCAG 1 chr8:86182477-86182496 ( 1) GACTGGGCCAG 1 chr8:86158099-86158118 ( 1) GACTGGGCCAG 1 chr8:86145909-86145928 ( 1) GACTGGGCCAG 1 chr8:86109479-86109498 ( 1) GACTGGGCCAG 1 chr22:10711670-10711689 ( 6) GCCTCGGCCTC 1 chr22:10552695-10552714 ( 5) GCCTCGGCCTC 1 chr22:7502253-7502272 ( 5) GCCTCGGCCTC 1 chr22:5868118-5868137 ( 6) GCCTCGGCCTC 1 chr17:38904526-38904545 ( 5) GCCTCGGCCTC 1 chr9:79638667-79638686 ( 9) GCCTCGGCCTC 1 chr9:77925874-77925893 ( 2) GCCTCGGCCTC 1 chr9:43062561-43062580 ( 2) GCCTCGGCCTC 1 chr9:40234843-40234862 ( 9) GCCTCGGCCTC 1 chr21:197470-197489 ( 7) GCCTGGAACTG 1 chr21:190334-190353 ( 7) GCCTGGAACTG 1 chr21:183194-183213 ( 7) GCCTGGAACTG 1 chr21:176054-176073 ( 7) GCCTGGAACTG 1 chr1:143645816-143645853 ( 10) GCCTGGAACTG 1 chr22:9831175-9831194 ( 10) GACTCCAGCTG 1 chr22:9826534-9826553 ( 1) GACTCCAGCTG 1 chr22:4109124-4109143 ( 6) GACTCCAGCTG 1 chr22:4102525-4102544 ( 6) GACTCCAGCTG 1 chr22:4004497-4004516 ( 6) GACTCCAGCTG 1 chr22:3931874-3931893 ( 6) GACTCCAGCTG 1 chr15:158213-158232 ( 10) GACTCCAGCTG 1 chr15:151359-151378 ( 10) GACTCCAGCTG 1 chr15:107815-107834 ( 10) GACTCCAGCTG 1 chr13:5344096-5344115 ( 1) GACTCCAGCTG 1 chr17:23097265-23097284 ( 9) GCCTGGCACTG 1 chr17:23094893-23094912 ( 9) GCCTGGCACTG 1 chr17:23071361-23071380 ( 9) GCCTGGCACTG 1 chr17:23066637-23066656 ( 9) GCCTGGCACTG 1 chr17:23064284-23064303 ( 9) GCCTGGCACTG 1 chr20:30944708-30944727 ( 6) GCCTGCACCTT 1 chr9:80285900-80285919 ( 2) GCCTGGGCCTT 1 chr9:78335653-78335672 ( 9) GCCTGGGCCTT 1 chr9:78271803-78271822 ( 2) GCCTGGGCCTT 1 chr9:40859452-40859471 ( 9) GCCTGGGCCTT 1 chr2:91849709-91849728 ( 7) GCCTGCGCCCG 1 chr2:90147838-90147857 ( 7) GCCTGCGCCCG 1 chr22:3852254-3852273 ( 1) GACTCCCGCTG 1 chr20:29991701-29991720 ( 8) GACTCCCGCTG 1 chr19:39999530-39999549 ( 3) GCCTGCGGGTG 1 chr19:39976811-39976830 ( 3) GCCTGCGGGTG 1 chr19:39951535-39951554 ( 3) GCCTGCGGGTG 1 chr19:39946461-39946480 ( 3) GCCTGCGGGTG 1 chr14:5888111-5888130 ( 1) GACTCCCGCTG 1 chr14:4082765-4082784 ( 1) GACTCCCGCTG 1 chr14:213708-213727 ( 10) GACTCCCGCTG 1 chr14:157126-157145 ( 10) GACTCCCGCTG 1 chr14:13241684-13241703 ( 3) GCCTGGGCATG 1 chr8:12383139-12383158 ( 2) GCTTGCCCCTG 1 chr8:12156817-12156836 ( 10) GCTTGCCCCTG 1 chr8:11827275-11827294 ( 2) GCTTGCCCCTG 1 chr8:11811979-11811998 ( 2) GCTTGCCCCTG 1 chr8:11773739-11773758 ( 2) GCTTGCCCCTG 1 chr8:11766091-11766110 ( 2) GCTTGCCCCTG 1 chr8:11750795-11750814 ( 2) GCTTGCCCCTG 1 chr8:11712555-11712574 ( 2) GCTTGCCCCTG 1 chr8:7336330-7336349 ( 10) GCTTGCCCCTG 1 chr1:12663105-12663124 ( 9) GACTGGGCGTG 1 chr12:37371854-37371873 ( 8) GCCTGCCCCGC 1 chr22:5749454-5749473 ( 10) GACTCCAGCTC 1 chr15:5292598-5292638 ( 31) GACTCCAGCTC 1 chr14:2875555-2875574 ( 10) GACTCCAGCTC 1 chr13:10020799-10020839 ( 31) GACTCCAGCTC 1 chr16:35281686-35281706 ( 8) GACTGCAGCAC 1 chr16:35121628-35121647 ( 3) GACTGCAGCAC 1 chr16:34862066-34862085 ( 3) GACTGCAGCAC 1 chr16:34719846-34719865 ( 8) GACTGCAGCAC 1 chr16:33886085-33886104 ( 8) GACTGCAGCAC 1 chr16:33726136-33726155 ( 3) GACTGCAGCAC 1 chr15:137226-137245 ( 10) GACTCCAACTG 1 chr15:129959-129978 ( 10) GACTCCAACTG 1 chr15:115103-115122 ( 10) GACTCCAACTG 1 chr21:10547820-10547839 ( 1) ACCTGCTCCTG 1 chr20:29708925-29708944 ( 5) GCCTGCACCAT 1 chr15:17154843-17154862 ( 1) ACCTGCTCCTG 1 chr14:6662285-6662304 ( 10) ACCTGCTCCTG 1 chr13:13469979-13469998 ( 1) ACCTGCTCCTG 1 chr9:80340010-80340029 ( 1) ACCTGCTCCTG 1 chr9:80196263-80196282 ( 10) ACCTGCTCCTG 1 chr9:47781769-47781788 ( 10) ACCTGCTCCTG 1 chr9:42017299-42017318 ( 1) ACCTGCTCCTG 1 chr9:40804628-40804647 ( 10) ACCTGCTCCTG 1 chr19:38974748-38974767 ( 8) GCCTGCGGGAG 1 chr19:38962127-38962146 ( 8) GCCTGCGGGAG 1 chr19:38957083-38957102 ( 8) GCCTGCGGGAG 1 chr19:38914043-38914062 ( 8) GCCTGCGGGAG 1 chr9:47778182-47778224 ( 28) GCCTGGGCCCC 1 chr22:11290051-11290070 ( 2) GGCTGCACCAG 1 chr2:97915589-97915608 ( 6) ACCTCGGCCTC 1 chr2:97806150-97806169 ( 5) ACCTCGGCCTC 1 chr2:97587617-97587636 ( 4) ACCTCGGCCTC 1 chr22:11484507-11484526 ( 2) GGCTGGACCAG 1 chr14:8706823-8706842 ( 2) GGCTGGACCAG 1 chr16:34612673-34612692 ( 7) GCCTGGCCAAG 1 chr15:21465184-21465203 ( 6) GCCTGCACAGG 1 chr19:50739675-50739694 ( 5) GCCTGCCCTTG 1 chr16:28780059-28780078 ( 9) GCCTGGGCAAC 1 chr13:10077435-10077454 ( 10) ACCTGCTCCGG 1 chr1:143503300-143503319 ( 10) AACTGCGCATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 11 n= 28704 bayes= 9.01436 E= 2.1e-010 -131 -1361 200 -1361 31 150 -321 -1361 -1361 206 -1361 -194 -1361 -1361 -1361 185 -1361 33 169 -1361 -1361 139 90 -1361 31 -28 82 -179 -141 147 33 -1361 -279 198 -163 -511 -36 -321 -148 129 -1361 25 163 -253 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 11 nsites= 125 E= 2.1e-010 0.112000 0.000000 0.888000 0.000000 0.344000 0.632000 0.024000 0.000000 0.000000 0.928000 0.000000 0.072000 0.000000 0.000000 0.000000 1.000000 0.000000 0.280000 0.720000 0.000000 0.000000 0.584000 0.416000 0.000000 0.344000 0.184000 0.392000 0.080000 0.104000 0.616000 0.280000 0.000000 0.040000 0.880000 0.072000 0.008000 0.216000 0.024000 0.080000 0.680000 0.000000 0.264000 0.688000 0.048000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GMCTGSRCCTG MEME-7 regular expression -------------------------------------------------------------------------------- G[CA]CT[GC][CG][GA][CG]C[TA][GC] -------------------------------------------------------------------------------- Time 143.56 secs. ******************************************************************************** ******************************************************************************** MOTIF MTTCTSGKTCTGTBM MEME-8 width = 15 sites = 113 llr = 1116 E-value = 1.8e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 Description -------------------------------------------------------------------------------- Simplified A 51::1:2::1::::5 pos.-specific C 4::a:512:7:2:34 probability G :22::4552::623: matrix T 188:912382a2841 bits 2.2 1.9 * * 1.7 * * 1.5 * * Relative 1.3 ** * * Entropy 1.1 *** * * * (14.3 bits) 0.9 **** *** * 0.6 ****** ****** * 0.4 ****** ******** 0.2 *************** 0.0 --------------- Multilevel ATTCTCGGTCTGTTA consensus C G GTTGT T CC sequence A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr22:10525076-10525095 + 1 1.53e-07 . attctgggtctttta tgatt chr22:9910098-9910117 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGATT chr22:9820956-9820975 + 1 1.53e-07 . attctgggtctttta tggtt chr22:9148785-9148804 + 1 1.53e-07 . attctgggtctttta tgatt chr22:7715417-7715436 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGATT chr22:3706044-3706063 + 1 1.53e-07 . attctgggtctttta tggtt chr22:388179-388198 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGGTT chr21:8200624-8200643 + 1 1.53e-07 . attctgggtctttta tgatt chr21:6495708-6495727 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGATT chr21:2204246-2204265 + 1 1.53e-07 . attctgggtctttta tggtt chr21:374941-374960 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGGTT chr14:5723899-5723918 + 1 1.53e-07 . attctgggtctttta tgatt chr14:4649223-4649242 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGGTT chr14:3053460-3053479 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGATT chr14:1525147-1525166 + 1 1.53e-07 . attctgggtctttta tggtt chr13:11229306-11229325 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGATT chr13:10193826-10193845 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGATT chr13:5223962-5223981 + 1 1.53e-07 . attctgggtctttta tggtt chr1:127938788-127938807 - 6 1.53e-07 . ATTCTGGGTCTTTTA TGGTT chr22:5895891-5895910 - 6 4.52e-07 . ATTCTGGTTCTTTTA TGATT chr21:8356311-8356330 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr21:7290316-7290335 + 1 2.17e-06 . atgctcattctgtga ggaac chr21:6407972-6407991 + 1 2.17e-06 . atgctcattctgtga ggaac chr21:2335792-2335811 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr21:235503-235522 + 1 2.17e-06 . atgctcattctgtga ggaac chr15:5352851-5352870 + 1 2.17e-06 . atgctcattctgtga ggaac chr15:1867267-1867286 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr15:173274-173293 + 1 2.17e-06 . atgctcattctgtga ggaac chr14:5879632-5879651 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr14:4075462-4075481 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr14:2937191-2937210 + 1 2.17e-06 . atgctcattctgtga ggaac chr14:1656374-1656393 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr13:11121622-11121641 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr13:10081023-10081042 + 1 2.17e-06 . atgctcattctgtga ggaac chr9:76969391-76969410 - 6 2.17e-06 . ATGCTCATTCTGTGA GGAAC chr14:1659961-1660009 - 30 3.46e-06 TGGGC CTTCTGTCTCTCTGC GCCTGCGCCG chr22:16992412-16992431 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr22:11279472-11279491 + 3 4.59e-06 cc cttctctggctggtc aga chr22:6459553-6459572 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr17:27683409-27683428 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr7:59964605-59964624 + 3 4.59e-06 cc cttctctggctggtc aga chr7:59386258-59386277 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr7:59323892-59323911 + 3 4.59e-06 cc cttctctggctggtc aga chr7:58892104-58892123 + 3 4.59e-06 cc cttctctggctggtc aga chr7:58860738-58860757 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr1:128973276-128973295 + 3 4.59e-06 cc cttctctggctggtc aga chr1:128814926-128814945 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr1:126891744-126891763 - 4 4.59e-06 CC CTTCTCTGGCTGGTC AGA chr7:58647959-58647979 + 4 5.26e-06 tcc cttctgtggctggtc aga chr9:79732605-79732624 + 2 6.67e-06 c ctgctgggtttttga cttc chr9:40328902-40328921 + 3 6.67e-06 gc ctgctgggtttttga ctt chr21:7286718-7286737 + 6 8.27e-06 TGGGC CTTCTgcctctctgc chr21:2339445-2339464 - 3 8.27e-06 GGC CTTCTGCCTCTCTGC GC chr14:4079115-4079134 - 1 8.27e-06 TGGGC CTTCTGCCTCTCTGC chr13:11125234-11125253 - 1 8.27e-06 TGGGC CTTCTGCCTCTCTGC chr15:20249645-20249664 - 5 1.03e-05 A CATCTGGGTCTGGTC AGGA chr22:10528538-10528557 + 1 1.46e-05 . cttctggttatctga ggcgt chr22:5892407-5892426 - 6 1.46e-05 . CTTCTGGTTATCTGA GGTAT chr21:97488-97507 + 4 1.46e-05 ata agtcacggtttgtcc gT chr21:91148-91167 + 4 1.46e-05 ata agtcacggtttgtcc gT chr21:84815-84834 + 4 1.46e-05 ata agtcacggtttgtcc gT chr21:78486-78505 + 4 1.46e-05 ata agtcacggtttgtcc gT chr21:72166-72185 + 4 1.46e-05 ata agtcacggtttgtcc gT chr21:65832-65851 + 4 1.46e-05 ata agtcacggtttgtcc gT chr11:50337194-50337213 - 5 1.46e-05 G AGTCTCACTTTGTCA CCCA chr2:92202558-92202620 - 45 1.46e-05 ACGT AGTCTCGCTTTTTTC CCCCCGCCGC chr22:3614195-3614214 - 6 1.63e-05 . CATCTCACTCTGTCA CCCAG chr21:6404313-6404332 + 4 1.63e-05 GAC CTTCTGActttctgc ac chr15:5349255-5349274 + 4 1.63e-05 GAC CTTCTGActttctgc ac chr15:1644072-1644091 - 6 1.63e-05 . CATCTCACTCTGTCA CCCAG chr14:2933618-2933637 + 6 1.63e-05 TGGAC CTTCTGActttctgc chr22:11590545-11590564 - 1 1.80e-05 AAATT ATTATGTGTCTGTTC chr22:11263564-11263583 - 1 1.80e-05 AAATT ATTATGTGTCTGTTC chr22:6476916-6476935 + 6 1.80e-05 aaatt attatgtgtctgttc chr9:80280226-80280245 + 6 2.39e-05 aggtc tttcttgtgctgttc chr9:78341328-78341347 - 1 2.39e-05 AGGTC TTTCTTGTGCTGTTC chr9:40865130-40865149 - 1 2.39e-05 AGGTC TTTCTTGTGCTGTTC chr22:11197287-11197307 + 6 2.61e-05 gatgg aggcttgctctgtca c chr21:8689644-8689664 + 6 2.61e-05 gatgg aggcttgctctgtca c chr16:35083466-35083485 + 4 2.61e-05 gtg ctgcacactctgtca cc chr16:34757933-34757954 - 3 2.61e-05 TCGTG CTGCACACTCTGTCA CC chr16:33687999-33688020 + 6 2.61e-05 tcgtg ctgcacactctgtca cc chr13:11600092-11600112 + 6 2.61e-05 gatgg aggcttgctctgtca c chr22:10742150-10742169 - 6 3.41e-05 . CTTCTGGTGATCTGA GGCGT chr22:9906612-9906631 - 6 3.41e-05 . CTTCTGGTGATCTGA GGCCT chr22:9152233-9152252 + 1 3.41e-05 . cttctggtgatctga ggcgt chr22:7711966-7711985 - 6 3.41e-05 . CTTCTGGTGATCTGA GGTGT chr22:7480177-7480196 + 1 3.41e-05 . cttctggtgatctga ggtgt chr22:3709388-3709407 + 1 3.41e-05 . cttctggtgatctga ggcgt chr22:384744-384763 - 6 3.41e-05 . CTTCTGGTGATCTGA GGAGT chr15:21572006-21572025 + 3 3.41e-05 aA CTTCTATTTCTTTCA CTT chr15:21425402-21425421 - 4 3.41e-05 AA CTTCTATTTCTTTCA CTT chr15:20696145-20696164 + 3 3.41e-05 aA CTTCTATTTCTTTCA CTT chr5:70772126-70772164 + 17 4.06e-05 ttttagatgg agtcttgctctgtct cctaggct chr9:42624149-42624168 - 4 4.79e-05 CC CATCTCTGGCTGGTC AGA chr2:89807689-89807708 + 3 4.79e-05 cc catctctggctggtc aca chr18:47194232-47194251 + 3 5.20e-05 gg tttctccgtttggcc cag chr18:47182443-47182462 + 3 5.20e-05 gg tttctccgtttggcc cag chr21:2368307-2368326 - 3 5.63e-05 ATA AGTCACGGTTTGTCT GT chr21:2361584-2361603 - 3 5.63e-05 ATA AGTCACGGTTTGTCT GT chr21:2354831-2354850 - 3 5.63e-05 ATA AGTCACGGTTTGTCT GT chr21:2348401-2348420 - 3 5.63e-05 ATA AGTCACGGTTTGTCT GT chr16:35133517-35133536 - 2 6.52e-05 AGCT TTTCTCTGTTTCTTT T chr16:33738028-33738047 - 2 6.52e-05 AGCT TTTCTCTGTTTCTTT T chr22:12313996-12314015 - 4 7.51e-05 TT TTTCTCCCTTTCTCC CTC chr21:222812-222831 + 4 9.28e-05 aga aatcacggTTTTTCC GT chr15:2540001-2540020 + 1 1.06e-04 . tatctgtctctctcc gtctg chr22:181228-181247 - 2 1.44e-04 TGAG TGTCTAGGGTTGTCC T chr22:168496-168515 - 2 1.44e-04 TGAG TGTCTAGGGTTGTCC T chr21:10554895-10554914 + 4 2.14e-04 ttt agtcttcttttgtct tc chr14:6655218-6655237 - 3 2.14e-04 TTT AGTCTTCTTTTGTCT TC chr13:13477046-13477065 + 4 2.14e-04 ttt agtcttcttttgtct tc chr15:15663920-15663939 + 2 2.49e-04 c tttgtctgtctgtct cttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:10525076-10525095 1.5e-07 [+8]_5 chr22:9910098-9910117 1.5e-07 5_[-8] chr22:9820956-9820975 1.5e-07 [+8]_5 chr22:9148785-9148804 1.5e-07 [+8]_5 chr22:7715417-7715436 1.5e-07 5_[-8] chr22:3706044-3706063 1.5e-07 [+8]_5 chr22:388179-388198 1.5e-07 5_[-8] chr21:8200624-8200643 1.5e-07 [+8]_5 chr21:6495708-6495727 1.5e-07 5_[-8] chr21:2204246-2204265 1.5e-07 [+8]_5 chr21:374941-374960 1.5e-07 5_[-8] chr14:5723899-5723918 1.5e-07 [+8]_5 chr14:4649223-4649242 1.5e-07 5_[-8] chr14:3053460-3053479 1.5e-07 5_[-8] chr14:1525147-1525166 1.5e-07 [+8]_5 chr13:11229306-11229325 1.5e-07 5_[-8] chr13:10193826-10193845 1.5e-07 5_[-8] chr13:5223962-5223981 1.5e-07 [+8]_5 chr1:127938788-127938807 1.5e-07 5_[-8] chr22:5895891-5895910 4.5e-07 5_[-8] chr21:8356311-8356330 2.2e-06 5_[-8] chr21:7290316-7290335 2.2e-06 [+8]_5 chr21:6407972-6407991 2.2e-06 [+8]_5 chr21:2335792-2335811 2.2e-06 5_[-8] chr21:235503-235522 2.2e-06 [+8]_5 chr15:5352851-5352870 2.2e-06 [+8]_5 chr15:1867267-1867286 2.2e-06 5_[-8] chr15:173274-173293 2.2e-06 [+8]_5 chr14:5879632-5879651 2.2e-06 5_[-8] chr14:4075462-4075481 2.2e-06 5_[-8] chr14:2937191-2937210 2.2e-06 [+8]_5 chr14:1656374-1656393 2.2e-06 5_[-8] chr13:11121622-11121641 2.2e-06 5_[-8] chr13:10081023-10081042 2.2e-06 [+8]_5 chr9:76969391-76969410 2.2e-06 5_[-8] chr14:1659961-1660009 3.5e-06 29_[-8]_5 chr22:16992412-16992431 4.6e-06 3_[-8]_2 chr22:11279472-11279491 4.6e-06 2_[+8]_3 chr22:6459553-6459572 4.6e-06 3_[-8]_2 chr17:27683409-27683428 4.6e-06 3_[-8]_2 chr7:59964605-59964624 4.6e-06 2_[+8]_3 chr7:59386258-59386277 4.6e-06 3_[-8]_2 chr7:59323892-59323911 4.6e-06 2_[+8]_3 chr7:58892104-58892123 4.6e-06 2_[+8]_3 chr7:58860738-58860757 4.6e-06 3_[-8]_2 chr1:128973276-128973295 4.6e-06 2_[+8]_3 chr1:128814926-128814945 4.6e-06 3_[-8]_2 chr1:126891744-126891763 4.6e-06 3_[-8]_2 chr7:58647959-58647979 5.3e-06 3_[+8]_3 chr9:79732605-79732624 6.7e-06 1_[+8]_4 chr9:40328902-40328921 6.7e-06 2_[+8]_3 chr21:7286718-7286737 8.3e-06 5_[+8] chr21:2339445-2339464 8.3e-06 2_[-8]_3 chr14:4079115-4079134 8.3e-06 [-8]_5 chr13:11125234-11125253 8.3e-06 [-8]_5 chr15:20249645-20249664 1e-05 4_[-8]_1 chr22:10528538-10528557 1.5e-05 [+8]_5 chr22:5892407-5892426 1.5e-05 5_[-8] chr21:97488-97507 1.5e-05 3_[+8]_2 chr21:91148-91167 1.5e-05 3_[+8]_2 chr21:84815-84834 1.5e-05 3_[+8]_2 chr21:78486-78505 1.5e-05 3_[+8]_2 chr21:72166-72185 1.5e-05 3_[+8]_2 chr21:65832-65851 1.5e-05 3_[+8]_2 chr11:50337194-50337213 1.5e-05 4_[-8]_1 chr2:92202558-92202620 1.5e-05 44_[-8]_4 chr22:3614195-3614214 1.6e-05 5_[-8] chr21:6404313-6404332 1.6e-05 3_[+8]_2 chr15:5349255-5349274 1.6e-05 3_[+8]_2 chr15:1644072-1644091 1.6e-05 5_[-8] chr14:2933618-2933637 1.6e-05 5_[+8] chr22:11590545-11590564 1.8e-05 [-8]_5 chr22:11263564-11263583 1.8e-05 [-8]_5 chr22:6476916-6476935 1.8e-05 5_[+8] chr9:80280226-80280245 2.4e-05 5_[+8] chr9:78341328-78341347 2.4e-05 [-8]_5 chr9:40865130-40865149 2.4e-05 [-8]_5 chr22:11197287-11197307 2.6e-05 5_[+8]_1 chr21:8689644-8689664 2.6e-05 5_[+8]_1 chr16:35083466-35083485 2.6e-05 3_[+8]_2 chr16:34757933-34757954 2.6e-05 2_[-8]_5 chr16:33687999-33688020 2.6e-05 5_[+8]_2 chr13:11600092-11600112 2.6e-05 5_[+8]_1 chr22:10742150-10742169 3.4e-05 5_[-8] chr22:9906612-9906631 3.4e-05 5_[-8] chr22:9152233-9152252 3.4e-05 [+8]_5 chr22:7711966-7711985 3.4e-05 5_[-8] chr22:7480177-7480196 3.4e-05 [+8]_5 chr22:3709388-3709407 3.4e-05 [+8]_5 chr22:384744-384763 3.4e-05 5_[-8] chr15:21572006-21572025 3.4e-05 2_[+8]_3 chr15:21425402-21425421 3.4e-05 3_[-8]_2 chr15:20696145-20696164 3.4e-05 2_[+8]_3 chr5:70772126-70772164 4.1e-05 16_[+8]_8 chr9:42624149-42624168 4.8e-05 3_[-8]_2 chr2:89807689-89807708 4.8e-05 2_[+8]_3 chr18:47194232-47194251 5.2e-05 2_[+8]_3 chr18:47182443-47182462 5.2e-05 2_[+8]_3 chr21:2368307-2368326 5.6e-05 2_[-8]_3 chr21:2361584-2361603 5.6e-05 2_[-8]_3 chr21:2354831-2354850 5.6e-05 2_[-8]_3 chr21:2348401-2348420 5.6e-05 2_[-8]_3 chr16:35133517-35133536 6.5e-05 1_[-8]_4 chr16:33738028-33738047 6.5e-05 1_[-8]_4 chr22:12313996-12314015 7.5e-05 3_[-8]_2 chr21:222812-222831 9.3e-05 3_[+8]_2 chr15:2540001-2540020 0.00011 [+8]_5 chr22:181228-181247 0.00014 1_[-8]_4 chr22:168496-168515 0.00014 1_[-8]_4 chr21:10554895-10554914 0.00021 3_[+8]_2 chr14:6655218-6655237 0.00021 2_[-8]_3 chr13:13477046-13477065 0.00021 3_[+8]_2 chr15:15663920-15663939 0.00025 1_[+8]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MTTCTSGKTCTGTBM width=15 seqs=113 chr22:10525076-10525095 ( 1) ATTCTGGGTCTTTTA 1 chr22:9910098-9910117 ( 6) ATTCTGGGTCTTTTA 1 chr22:9820956-9820975 ( 1) ATTCTGGGTCTTTTA 1 chr22:9148785-9148804 ( 1) ATTCTGGGTCTTTTA 1 chr22:7715417-7715436 ( 6) ATTCTGGGTCTTTTA 1 chr22:3706044-3706063 ( 1) ATTCTGGGTCTTTTA 1 chr22:388179-388198 ( 6) ATTCTGGGTCTTTTA 1 chr21:8200624-8200643 ( 1) ATTCTGGGTCTTTTA 1 chr21:6495708-6495727 ( 6) ATTCTGGGTCTTTTA 1 chr21:2204246-2204265 ( 1) ATTCTGGGTCTTTTA 1 chr21:374941-374960 ( 6) ATTCTGGGTCTTTTA 1 chr14:5723899-5723918 ( 1) ATTCTGGGTCTTTTA 1 chr14:4649223-4649242 ( 6) ATTCTGGGTCTTTTA 1 chr14:3053460-3053479 ( 6) ATTCTGGGTCTTTTA 1 chr14:1525147-1525166 ( 1) ATTCTGGGTCTTTTA 1 chr13:11229306-11229325 ( 6) ATTCTGGGTCTTTTA 1 chr13:10193826-10193845 ( 6) ATTCTGGGTCTTTTA 1 chr13:5223962-5223981 ( 1) ATTCTGGGTCTTTTA 1 chr1:127938788-127938807 ( 6) ATTCTGGGTCTTTTA 1 chr22:5895891-5895910 ( 6) ATTCTGGTTCTTTTA 1 chr21:8356311-8356330 ( 6) ATGCTCATTCTGTGA 1 chr21:7290316-7290335 ( 1) ATGCTCATTCTGTGA 1 chr21:6407972-6407991 ( 1) ATGCTCATTCTGTGA 1 chr21:2335792-2335811 ( 6) ATGCTCATTCTGTGA 1 chr21:235503-235522 ( 1) ATGCTCATTCTGTGA 1 chr15:5352851-5352870 ( 1) ATGCTCATTCTGTGA 1 chr15:1867267-1867286 ( 6) ATGCTCATTCTGTGA 1 chr15:173274-173293 ( 1) ATGCTCATTCTGTGA 1 chr14:5879632-5879651 ( 6) ATGCTCATTCTGTGA 1 chr14:4075462-4075481 ( 6) ATGCTCATTCTGTGA 1 chr14:2937191-2937210 ( 1) ATGCTCATTCTGTGA 1 chr14:1656374-1656393 ( 6) ATGCTCATTCTGTGA 1 chr13:11121622-11121641 ( 6) ATGCTCATTCTGTGA 1 chr13:10081023-10081042 ( 1) ATGCTCATTCTGTGA 1 chr9:76969391-76969410 ( 6) ATGCTCATTCTGTGA 1 chr14:1659961-1660009 ( 30) CTTCTGTCTCTCTGC 1 chr22:16992412-16992431 ( 4) CTTCTCTGGCTGGTC 1 chr22:11279472-11279491 ( 3) CTTCTCTGGCTGGTC 1 chr22:6459553-6459572 ( 4) CTTCTCTGGCTGGTC 1 chr17:27683409-27683428 ( 4) CTTCTCTGGCTGGTC 1 chr7:59964605-59964624 ( 3) CTTCTCTGGCTGGTC 1 chr7:59386258-59386277 ( 4) CTTCTCTGGCTGGTC 1 chr7:59323892-59323911 ( 3) CTTCTCTGGCTGGTC 1 chr7:58892104-58892123 ( 3) CTTCTCTGGCTGGTC 1 chr7:58860738-58860757 ( 4) CTTCTCTGGCTGGTC 1 chr1:128973276-128973295 ( 3) CTTCTCTGGCTGGTC 1 chr1:128814926-128814945 ( 4) CTTCTCTGGCTGGTC 1 chr1:126891744-126891763 ( 4) CTTCTCTGGCTGGTC 1 chr7:58647959-58647979 ( 4) CTTCTGTGGCTGGTC 1 chr9:79732605-79732624 ( 2) CTGCTGGGTTTTTGA 1 chr9:40328902-40328921 ( 3) CTGCTGGGTTTTTGA 1 chr21:7286718-7286737 ( 6) CTTCTGCCTCTCTGC 1 chr21:2339445-2339464 ( 3) CTTCTGCCTCTCTGC 1 chr14:4079115-4079134 ( 1) CTTCTGCCTCTCTGC 1 chr13:11125234-11125253 ( 1) CTTCTGCCTCTCTGC 1 chr15:20249645-20249664 ( 5) CATCTGGGTCTGGTC 1 chr22:10528538-10528557 ( 1) CTTCTGGTTATCTGA 1 chr22:5892407-5892426 ( 6) CTTCTGGTTATCTGA 1 chr21:97488-97507 ( 4) AGTCACGGTTTGTCC 1 chr21:91148-91167 ( 4) AGTCACGGTTTGTCC 1 chr21:84815-84834 ( 4) AGTCACGGTTTGTCC 1 chr21:78486-78505 ( 4) AGTCACGGTTTGTCC 1 chr21:72166-72185 ( 4) AGTCACGGTTTGTCC 1 chr21:65832-65851 ( 4) AGTCACGGTTTGTCC 1 chr11:50337194-50337213 ( 5) AGTCTCACTTTGTCA 1 chr2:92202558-92202620 ( 45) AGTCTCGCTTTTTTC 1 chr22:3614195-3614214 ( 6) CATCTCACTCTGTCA 1 chr21:6404313-6404332 ( 4) CTTCTGACTTTCTGC 1 chr15:5349255-5349274 ( 4) CTTCTGACTTTCTGC 1 chr15:1644072-1644091 ( 6) CATCTCACTCTGTCA 1 chr14:2933618-2933637 ( 6) CTTCTGACTTTCTGC 1 chr22:11590545-11590564 ( 1) ATTATGTGTCTGTTC 1 chr22:11263564-11263583 ( 1) ATTATGTGTCTGTTC 1 chr22:6476916-6476935 ( 6) ATTATGTGTCTGTTC 1 chr9:80280226-80280245 ( 6) TTTCTTGTGCTGTTC 1 chr9:78341328-78341347 ( 1) TTTCTTGTGCTGTTC 1 chr9:40865130-40865149 ( 1) TTTCTTGTGCTGTTC 1 chr22:11197287-11197307 ( 6) AGGCTTGCTCTGTCA 1 chr21:8689644-8689664 ( 6) AGGCTTGCTCTGTCA 1 chr16:35083466-35083485 ( 4) CTGCACACTCTGTCA 1 chr16:34757933-34757954 ( 3) CTGCACACTCTGTCA 1 chr16:33687999-33688020 ( 6) CTGCACACTCTGTCA 1 chr13:11600092-11600112 ( 6) AGGCTTGCTCTGTCA 1 chr22:10742150-10742169 ( 6) CTTCTGGTGATCTGA 1 chr22:9906612-9906631 ( 6) CTTCTGGTGATCTGA 1 chr22:9152233-9152252 ( 1) CTTCTGGTGATCTGA 1 chr22:7711966-7711985 ( 6) CTTCTGGTGATCTGA 1 chr22:7480177-7480196 ( 1) CTTCTGGTGATCTGA 1 chr22:3709388-3709407 ( 1) CTTCTGGTGATCTGA 1 chr22:384744-384763 ( 6) CTTCTGGTGATCTGA 1 chr15:21572006-21572025 ( 3) CTTCTATTTCTTTCA 1 chr15:21425402-21425421 ( 4) CTTCTATTTCTTTCA 1 chr15:20696145-20696164 ( 3) CTTCTATTTCTTTCA 1 chr5:70772126-70772164 ( 17) AGTCTTGCTCTGTCT 1 chr9:42624149-42624168 ( 4) CATCTCTGGCTGGTC 1 chr2:89807689-89807708 ( 3) CATCTCTGGCTGGTC 1 chr18:47194232-47194251 ( 3) TTTCTCCGTTTGGCC 1 chr18:47182443-47182462 ( 3) TTTCTCCGTTTGGCC 1 chr21:2368307-2368326 ( 3) AGTCACGGTTTGTCT 1 chr21:2361584-2361603 ( 3) AGTCACGGTTTGTCT 1 chr21:2354831-2354850 ( 3) AGTCACGGTTTGTCT 1 chr21:2348401-2348420 ( 3) AGTCACGGTTTGTCT 1 chr16:35133517-35133536 ( 2) TTTCTCTGTTTCTTT 1 chr16:33738028-33738047 ( 2) TTTCTCTGTTTCTTT 1 chr22:12313996-12314015 ( 4) TTTCTCCCTTTCTCC 1 chr21:222812-222831 ( 4) AATCACGGTTTTTCC 1 chr15:2540001-2540020 ( 1) TATCTGTCTCTCTCC 1 chr22:181228-181247 ( 2) TGTCTAGGGTTGTCC 1 chr22:168496-168515 ( 2) TGTCTAGGGTTGTCC 1 chr21:10554895-10554914 ( 4) AGTCTTCTTTTGTCT 1 chr14:6655218-6655237 ( 3) AGTCTTCTTTTGTCT 1 chr13:13477046-13477065 ( 4) AGTCTTCTTTTGTCT 1 chr15:15663920-15663939 ( 2) TTTGTCTGTCTGTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 7.77289 E= 1.8e-006 89 77 -1346 -138 -216 -1346 -26 144 -1346 -1346 -13 152 -338 211 -465 -1346 -116 -1346 -1346 166 -265 107 84 -165 -38 -133 107 -27 -1346 -26 120 12 -1346 -1346 10 146 -180 159 -1346 -16 -1346 -1346 -1346 185 -1346 -26 137 -21 -1346 -1346 -48 160 -1346 43 43 52 89 81 -1346 -151 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 113 E= 1.8e-006 0.513274 0.380531 0.000000 0.106195 0.061947 0.000000 0.185841 0.752212 0.000000 0.000000 0.203540 0.796460 0.026549 0.964602 0.008850 0.000000 0.123894 0.000000 0.000000 0.876106 0.044248 0.469027 0.398230 0.088496 0.212389 0.088496 0.469027 0.230088 0.000000 0.185841 0.513274 0.300885 0.000000 0.000000 0.238938 0.761062 0.079646 0.672566 0.000000 0.247788 0.000000 0.000000 0.000000 1.000000 0.000000 0.185841 0.575221 0.238938 0.000000 0.000000 0.159292 0.840708 0.000000 0.300885 0.300885 0.398230 0.513274 0.389381 0.000000 0.097345 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTTCTSGKTCTGTBM MEME-8 regular expression -------------------------------------------------------------------------------- [AC]T[TG]CT[CG][GTA][GT][TG][CT]T[GT]T[TCG][AC] -------------------------------------------------------------------------------- Time 154.21 secs. ******************************************************************************** ******************************************************************************** MOTIF AAKRWTGMTDWAAAA MEME-9 width = 15 sites = 87 llr = 746 E-value = 1.4e+018 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 Description -------------------------------------------------------------------------------- Simplified A 89:43:341348a86 pos.-specific C :11::::41:11::: probability G 2:451:6:23::::1 matrix T ::416a126451:23 bits 2.2 1.9 * * 1.7 * * 1.5 * * Relative 1.3 * ** Entropy 1.1 ** * ** (12.4 bits) 0.9 ** * *** 0.6 ******* **** 0.4 ******* * ***** 0.2 *************** 0.0 --------------- Multilevel AAGGTTGCTTTAAAA consensus G TAA AAGAA T sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr21:8760273-8760292 + 4 6.92e-08 att aaggttgcgataaaa tg chr13:11670830-11670849 + 4 6.92e-08 att aaggttgcgataaaa tg chr17:27695308-27695327 - 4 1.59e-07 CT AAGGTTGCGGAAAAA TGA chr17:22318112-22318131 - 4 1.59e-07 TT AAGGTTGCGGAAAAA TGA chr2:94906311-94906330 - 4 1.59e-07 TT AAGGTTGCGGAAAAA TGA chr2:94789839-94789858 + 3 1.59e-07 tt aaggttgcggaaaaa tga chr2:92243959-92243978 + 5 1.59e-07 aatt aaggttgcggaaaaa t chr2:91988183-91988202 - 4 1.59e-07 TT AAGGTTGCGGAAAAA TGA chr2:91653335-91653354 - 4 1.59e-07 TT AAGGTTGCGGAAAAA TGA chr2:90947565-90947584 + 5 1.59e-07 aatt aaggttgcggaaaaa t chr2:89905578-89905597 - 4 1.59e-07 TT AAGGTTGCGGAAAAA TGA chr2:89795800-89795819 + 5 1.59e-07 aatt aaggttgcggaaaaa t chr1:103705179-103705198 + 6 3.20e-07 ctCTA AATATTGATTAAAAA chr1:103611044-103611066 + 8 3.20e-07 gactCTA AATATTGATTAAAAA T chr21:8821883-8821902 + 4 1.09e-06 att aaggttgcaataaaa tg chr14:8819056-8819075 + 4 1.09e-06 att aaggttgcaataaaa tg chr14:8524183-8524202 - 3 1.09e-06 ATT AAGGTTGCAATAAAA TG chr14:8383849-8383868 - 3 1.09e-06 ATT AAGGTTGCAATAAAA TG chr13:11732447-11732466 + 4 1.09e-06 att aaggttgcaataaaa tg chr14:8673994-8674013 + 3 1.88e-06 tt aaggttgtggaaaaa tga chr22:7782056-7782075 + 6 3.10e-06 ataat aataataatttaaaa chr22:3639707-3639726 - 4 3.10e-06 AT AATAATAATTTAAAA AAG chr16:30503144-30503163 + 1 3.10e-06 . AACGTTGCCTTAAAA AATTg chr16:28943740-28943759 - 6 3.10e-06 . AACGTTGCCTTAAAA AATTG chr16:28732725-28732744 + 1 3.10e-06 . AACGTTGCCTTAAAA AATTg chr14:6700661-6700680 + 6 5.73e-06 ctgag aatgatgAATTAAAA chr14:2894077-2894096 + 6 5.73e-06 ctgag aatgatgaattAAAA chr8:86309928-86309947 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86297739-86297758 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86285550-86285569 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86273361-86273380 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86261171-86261190 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86224599-86224618 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86175838-86175857 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr8:86163649-86163668 - 1 9.94e-06 AATTA AAGTATAATTTAAAA chr22:10646298-10646317 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr22:3802570-3802589 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr21:8321863-8321882 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr21:2300881-2300900 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr15:1832368-1832387 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr14:5845123-5845142 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr14:1621472-1621491 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr13:5320611-5320630 - 1 4.12e-05 CATTG GCGGTTTCTATAAAA chr7:59241810-59241852 - 25 4.57e-05 ACTC GATGATGATTAAATT CAATTTCATT chr7:59165099-59165144 + 5 4.57e-05 actc gatgatgattaaatt caatttcatt chr20:30450223-30450242 - 4 5.59e-05 TT AAGAATTATGTTAAA TCT chr22:9754589-9754608 - 4 6.17e-05 AT AACTATAATTAAAAA AGA chr16:35298829-35298848 + 5 6.17e-05 GGAA AATaatgccgtaaac c chr16:33903184-33903203 + 5 6.17e-05 GGAA AATaatgccgtaaac c chr16:30677115-30677134 - 1 6.80e-05 TAAAT AATATTTCTTATAAT chr16:21404489-21404508 - 1 6.80e-05 TAAAT AATATTTCTTATAAT chr13:10105360-10105379 - 1 7.48e-05 ACCTA AATATTGTGAACAAT chr13:5331068-5331087 + 6 7.48e-05 cccta aatattgtgaacaat chr9:42422915-42422934 + 1 8.21e-05 . aagagtgtttcaaaa ctgct chr9:47587833-47587852 - 6 9.85e-05 . AATAGTGTTTCAAAA CTTCT chr8:86600890-86600909 - 1 9.85e-05 TTTAA AATTATACTTTAATT chr8:86236789-86236808 + 6 9.85e-05 tttaa aattatactttaatt chr8:86212410-86212429 + 6 9.85e-05 tttaa aattatactttaatt chr13:11093100-11093119 - 1 1.08e-04 AGTAT AATAATAATAATAAT chr6:161990163-161990182 - 3 1.28e-04 GGG AATATTGTTAAAATG AT chr6:161984620-161984639 - 3 1.28e-04 GGG AATATTGTTAAAATG AT chr6:161979074-161979093 - 3 1.28e-04 GGG AATATTGTTAAAATG AT chr6:161973526-161973545 - 3 1.28e-04 GGG AATATTGTTAAAATG AT chr22:7698254-7698273 + 1 1.39e-04 . atcattgatataaat ttata chr15:5448455-5448474 + 1 1.39e-04 . atcattgatataaat ttata chr14:3036246-3036265 + 1 1.39e-04 . atcattgatataaat ttata chr7:58922269-58922290 - 6 1.39e-04 TT GATGATGATTTGAAT TTTTA chr7:58830568-58830589 + 5 1.39e-04 attt gatgatgattTGAAT TTT chr7:59293762-59293781 - 5 1.92e-04 C AATGATGACTCAATT TGAG chr20:31169440-31169459 - 4 2.24e-04 TT AAGAATTATGCTAAA TCT chr1:145762002-145762021 - 5 2.59e-04 T AACAATAATAATAAT GGCA chr1:143604474-143604493 + 2 2.59e-04 t aacaataataataat GGCA chr20:30640333-30640352 - 3 2.99e-04 AGG AAGGTTCAGAACAAA GC chr9:77356381-77356400 + 5 3.20e-04 caag gatattggcctaaaa t chr9:42491623-42491642 + 5 3.20e-04 caag gatattggcctaaaa t chr22:10652563-10652582 + 1 3.42e-04 . gatattatggacaat atcac chr22:9867976-9867995 - 6 3.42e-04 . GATATTATGGACAAT ATCAC chr22:3809162-3809181 + 1 3.42e-04 . gatattatggacaat atcac chr21:8328128-8328147 + 1 3.42e-04 . gatattatggacaat atcac chr21:2307479-2307498 + 1 3.42e-04 . gatattatggacaat atcac chr9:80363648-80363667 + 2 3.66e-04 g aatagtgccgcaata atca chr9:80172682-80172701 - 5 3.66e-04 G AATAGTGCCGCAATA ATCA chr7:59304777-59304796 - 6 3.66e-04 . GATGATGATTTCATG CAATT chr17:23254467-23254486 - 2 3.91e-04 TAAA ATCATTGGTAAAAAA A chr2:91556442-91556461 + 5 4.73e-04 attc gatgatgattccatt c chr15:251055-251074 + 5 8.30e-04 aact aagagtggtgttaag g chr22:3746790-3746809 - 4 1.21e-03 TC AATGTTTCCCTTAAC ATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:8760273-8760292 6.9e-08 3_[+9]_2 chr13:11670830-11670849 6.9e-08 3_[+9]_2 chr17:27695308-27695327 1.6e-07 3_[-9]_2 chr17:22318112-22318131 1.6e-07 3_[-9]_2 chr2:94906311-94906330 1.6e-07 3_[-9]_2 chr2:94789839-94789858 1.6e-07 2_[+9]_3 chr2:92243959-92243978 1.6e-07 4_[+9]_1 chr2:91988183-91988202 1.6e-07 3_[-9]_2 chr2:91653335-91653354 1.6e-07 3_[-9]_2 chr2:90947565-90947584 1.6e-07 4_[+9]_1 chr2:89905578-89905597 1.6e-07 3_[-9]_2 chr2:89795800-89795819 1.6e-07 4_[+9]_1 chr1:103705179-103705198 3.2e-07 5_[+9] chr1:103611044-103611066 3.2e-07 7_[+9]_1 chr21:8821883-8821902 1.1e-06 3_[+9]_2 chr14:8819056-8819075 1.1e-06 3_[+9]_2 chr14:8524183-8524202 1.1e-06 2_[-9]_3 chr14:8383849-8383868 1.1e-06 2_[-9]_3 chr13:11732447-11732466 1.1e-06 3_[+9]_2 chr14:8673994-8674013 1.9e-06 2_[+9]_3 chr22:7782056-7782075 3.1e-06 5_[+9] chr22:3639707-3639726 3.1e-06 3_[-9]_2 chr16:30503144-30503163 3.1e-06 [+9]_5 chr16:28943740-28943759 3.1e-06 5_[-9] chr16:28732725-28732744 3.1e-06 [+9]_5 chr14:6700661-6700680 5.7e-06 5_[+9] chr14:2894077-2894096 5.7e-06 5_[+9] chr8:86309928-86309947 9.9e-06 [-9]_5 chr8:86297739-86297758 9.9e-06 [-9]_5 chr8:86285550-86285569 9.9e-06 [-9]_5 chr8:86273361-86273380 9.9e-06 [-9]_5 chr8:86261171-86261190 9.9e-06 [-9]_5 chr8:86224599-86224618 9.9e-06 [-9]_5 chr8:86175838-86175857 9.9e-06 [-9]_5 chr8:86163649-86163668 9.9e-06 [-9]_5 chr22:10646298-10646317 4.1e-05 [-9]_5 chr22:3802570-3802589 4.1e-05 [-9]_5 chr21:8321863-8321882 4.1e-05 [-9]_5 chr21:2300881-2300900 4.1e-05 [-9]_5 chr15:1832368-1832387 4.1e-05 [-9]_5 chr14:5845123-5845142 4.1e-05 [-9]_5 chr14:1621472-1621491 4.1e-05 [-9]_5 chr13:5320611-5320630 4.1e-05 [-9]_5 chr7:59241810-59241852 4.6e-05 24_[-9]_4 chr7:59165099-59165144 4.6e-05 4_[+9]_27 chr20:30450223-30450242 5.6e-05 3_[-9]_2 chr22:9754589-9754608 6.2e-05 3_[-9]_2 chr16:35298829-35298848 6.2e-05 4_[+9]_1 chr16:33903184-33903203 6.2e-05 4_[+9]_1 chr16:30677115-30677134 6.8e-05 [-9]_5 chr16:21404489-21404508 6.8e-05 [-9]_5 chr13:10105360-10105379 7.5e-05 [-9]_5 chr13:5331068-5331087 7.5e-05 5_[+9] chr9:42422915-42422934 8.2e-05 [+9]_5 chr9:47587833-47587852 9.8e-05 5_[-9] chr8:86600890-86600909 9.8e-05 [-9]_5 chr8:86236789-86236808 9.8e-05 5_[+9] chr8:86212410-86212429 9.8e-05 5_[+9] chr13:11093100-11093119 0.00011 [-9]_5 chr6:161990163-161990182 0.00013 2_[-9]_3 chr6:161984620-161984639 0.00013 2_[-9]_3 chr6:161979074-161979093 0.00013 2_[-9]_3 chr6:161973526-161973545 0.00013 2_[-9]_3 chr22:7698254-7698273 0.00014 [+9]_5 chr15:5448455-5448474 0.00014 [+9]_5 chr14:3036246-3036265 0.00014 [+9]_5 chr7:58922269-58922290 0.00014 5_[-9]_2 chr7:58830568-58830589 0.00014 4_[+9]_3 chr7:59293762-59293781 0.00019 4_[-9]_1 chr20:31169440-31169459 0.00022 3_[-9]_2 chr1:145762002-145762021 0.00026 4_[-9]_1 chr1:143604474-143604493 0.00026 1_[+9]_4 chr20:30640333-30640352 0.0003 2_[-9]_3 chr9:77356381-77356400 0.00032 4_[+9]_1 chr9:42491623-42491642 0.00032 4_[+9]_1 chr22:10652563-10652582 0.00034 [+9]_5 chr22:9867976-9867995 0.00034 5_[-9] chr22:3809162-3809181 0.00034 [+9]_5 chr21:8328128-8328147 0.00034 [+9]_5 chr21:2307479-2307498 0.00034 [+9]_5 chr9:80363648-80363667 0.00037 1_[+9]_4 chr9:80172682-80172701 0.00037 4_[-9]_1 chr7:59304777-59304796 0.00037 5_[-9] chr17:23254467-23254486 0.00039 1_[-9]_4 chr2:91556442-91556461 0.00047 4_[+9]_1 chr15:251055-251074 0.00083 4_[+9]_1 chr22:3746790-3746809 0.0012 3_[-9]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAKRWTGMTDWAAAA width=15 seqs=87 chr21:8760273-8760292 ( 4) AAGGTTGCGATAAAA 1 chr13:11670830-11670849 ( 4) AAGGTTGCGATAAAA 1 chr17:27695308-27695327 ( 4) AAGGTTGCGGAAAAA 1 chr17:22318112-22318131 ( 4) AAGGTTGCGGAAAAA 1 chr2:94906311-94906330 ( 4) AAGGTTGCGGAAAAA 1 chr2:94789839-94789858 ( 3) AAGGTTGCGGAAAAA 1 chr2:92243959-92243978 ( 5) AAGGTTGCGGAAAAA 1 chr2:91988183-91988202 ( 4) AAGGTTGCGGAAAAA 1 chr2:91653335-91653354 ( 4) AAGGTTGCGGAAAAA 1 chr2:90947565-90947584 ( 5) AAGGTTGCGGAAAAA 1 chr2:89905578-89905597 ( 4) AAGGTTGCGGAAAAA 1 chr2:89795800-89795819 ( 5) AAGGTTGCGGAAAAA 1 chr1:103705179-103705198 ( 6) AATATTGATTAAAAA 1 chr1:103611044-103611066 ( 8) AATATTGATTAAAAA 1 chr21:8821883-8821902 ( 4) AAGGTTGCAATAAAA 1 chr14:8819056-8819075 ( 4) AAGGTTGCAATAAAA 1 chr14:8524183-8524202 ( 3) AAGGTTGCAATAAAA 1 chr14:8383849-8383868 ( 3) AAGGTTGCAATAAAA 1 chr13:11732447-11732466 ( 4) AAGGTTGCAATAAAA 1 chr14:8673994-8674013 ( 3) AAGGTTGTGGAAAAA 1 chr22:7782056-7782075 ( 6) AATAATAATTTAAAA 1 chr22:3639707-3639726 ( 4) AATAATAATTTAAAA 1 chr16:30503144-30503163 ( 1) AACGTTGCCTTAAAA 1 chr16:28943740-28943759 ( 6) AACGTTGCCTTAAAA 1 chr16:28732725-28732744 ( 1) AACGTTGCCTTAAAA 1 chr14:6700661-6700680 ( 6) AATGATGAATTAAAA 1 chr14:2894077-2894096 ( 6) AATGATGAATTAAAA 1 chr8:86309928-86309947 ( 1) AAGTATAATTTAAAA 1 chr8:86297739-86297758 ( 1) AAGTATAATTTAAAA 1 chr8:86285550-86285569 ( 1) AAGTATAATTTAAAA 1 chr8:86273361-86273380 ( 1) AAGTATAATTTAAAA 1 chr8:86261171-86261190 ( 1) AAGTATAATTTAAAA 1 chr8:86224599-86224618 ( 1) AAGTATAATTTAAAA 1 chr8:86175838-86175857 ( 1) AAGTATAATTTAAAA 1 chr8:86163649-86163668 ( 1) AAGTATAATTTAAAA 1 chr22:10646298-10646317 ( 1) GCGGTTTCTATAAAA 1 chr22:3802570-3802589 ( 1) GCGGTTTCTATAAAA 1 chr21:8321863-8321882 ( 1) GCGGTTTCTATAAAA 1 chr21:2300881-2300900 ( 1) GCGGTTTCTATAAAA 1 chr15:1832368-1832387 ( 1) GCGGTTTCTATAAAA 1 chr14:5845123-5845142 ( 1) GCGGTTTCTATAAAA 1 chr14:1621472-1621491 ( 1) GCGGTTTCTATAAAA 1 chr13:5320611-5320630 ( 1) GCGGTTTCTATAAAA 1 chr7:59241810-59241852 ( 25) GATGATGATTAAATT 1 chr7:59165099-59165144 ( 5) GATGATGATTAAATT 1 chr20:30450223-30450242 ( 4) AAGAATTATGTTAAA 1 chr22:9754589-9754608 ( 4) AACTATAATTAAAAA 1 chr16:35298829-35298848 ( 5) AATAATGCCGTAAAC 1 chr16:33903184-33903203 ( 5) AATAATGCCGTAAAC 1 chr16:30677115-30677134 ( 1) AATATTTCTTATAAT 1 chr16:21404489-21404508 ( 1) AATATTTCTTATAAT 1 chr13:10105360-10105379 ( 1) AATATTGTGAACAAT 1 chr13:5331068-5331087 ( 6) AATATTGTGAACAAT 1 chr9:42422915-42422934 ( 1) AAGAGTGTTTCAAAA 1 chr9:47587833-47587852 ( 6) AATAGTGTTTCAAAA 1 chr8:86600890-86600909 ( 1) AATTATACTTTAATT 1 chr8:86236789-86236808 ( 6) AATTATACTTTAATT 1 chr8:86212410-86212429 ( 6) AATTATACTTTAATT 1 chr13:11093100-11093119 ( 1) AATAATAATAATAAT 1 chr6:161990163-161990182 ( 3) AATATTGTTAAAATG 1 chr6:161984620-161984639 ( 3) AATATTGTTAAAATG 1 chr6:161979074-161979093 ( 3) AATATTGTTAAAATG 1 chr6:161973526-161973545 ( 3) AATATTGTTAAAATG 1 chr22:7698254-7698273 ( 1) ATCATTGATATAAAT 1 chr15:5448455-5448474 ( 1) ATCATTGATATAAAT 1 chr14:3036246-3036265 ( 1) ATCATTGATATAAAT 1 chr7:58922269-58922290 ( 6) GATGATGATTTGAAT 1 chr7:58830568-58830589 ( 5) GATGATGATTTGAAT 1 chr7:59293762-59293781 ( 5) AATGATGACTCAATT 1 chr20:31169440-31169459 ( 4) AAGAATTATGCTAAA 1 chr1:145762002-145762021 ( 5) AACAATAATAATAAT 1 chr1:143604474-143604493 ( 2) AACAATAATAATAAT 1 chr20:30640333-30640352 ( 3) AAGGTTCAGAACAAA 1 chr9:77356381-77356400 ( 5) GATATTGGCCTAAAA 1 chr9:42491623-42491642 ( 5) GATATTGGCCTAAAA 1 chr22:10652563-10652582 ( 1) GATATTATGGACAAT 1 chr22:9867976-9867995 ( 6) GATATTATGGACAAT 1 chr22:3809162-3809181 ( 1) GATATTATGGACAAT 1 chr21:8328128-8328147 ( 1) GATATTATGGACAAT 1 chr21:2307479-2307498 ( 1) GATATTATGGACAAT 1 chr9:80363648-80363667 ( 2) AATAGTGCCGCAATA 1 chr9:80172682-80172701 ( 5) AATAGTGCCGCAATA 1 chr7:59304777-59304796 ( 6) GATGATGATTTCATG 1 chr17:23254467-23254486 ( 2) ATCATTGGTAAAAAA 1 chr2:91556442-91556461 ( 5) GATGATGATTCCATT 1 chr15:251055-251074 ( 5) AAGAGTGGTGTTAAG 1 chr22:3746790-3746809 ( 4) AATGTTTCCCTTAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 7.86618 E= 1.4e+018 145 -1309 12 -1309 164 -128 -1309 -259 -1309 -95 101 66 54 -1309 105 -101 31 -1309 -195 111 -1309 -1309 -1309 185 -13 -427 140 -89 36 97 -228 -78 -178 -82 12 99 27 -269 25 41 50 -147 -1309 93 145 -95 -327 -142 185 -1309 -1309 -1309 160 -1309 -1309 -78 116 -269 -169 -1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 87 E= 1.4e+018 0.758621 0.000000 0.241379 0.000000 0.862069 0.091954 0.000000 0.045977 0.000000 0.114943 0.448276 0.436782 0.402299 0.000000 0.459770 0.137931 0.344828 0.000000 0.057471 0.597701 0.000000 0.000000 0.000000 1.000000 0.252874 0.011494 0.586207 0.149425 0.356322 0.436782 0.045977 0.160920 0.080460 0.126437 0.241379 0.551724 0.333333 0.034483 0.264368 0.367816 0.390805 0.080460 0.000000 0.528736 0.758621 0.114943 0.022989 0.103448 1.000000 0.000000 0.000000 0.000000 0.839080 0.000000 0.000000 0.160920 0.620690 0.034483 0.068966 0.275862 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAKRWTGMTDWAAAA MEME-9 regular expression -------------------------------------------------------------------------------- [AG]A[GT][GA][TA]T[GA][CA][TG][TAG][TA]AAA[AT] -------------------------------------------------------------------------------- Time 164.47 secs. ******************************************************************************** ******************************************************************************** MOTIF GGTGGCTS MEME-10 width = 8 sites = 124 llr = 938 E-value = 3.0e+022 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 Description -------------------------------------------------------------------------------- Simplified A 1:1:2:1: pos.-specific C :22:1a:4 probability G 98:a7::4 matrix T ::6:::92 bits 2.2 * 1.9 * * 1.7 * * * 1.5 ** * * Relative 1.3 ** * ** Entropy 1.1 ** * ** (10.9 bits) 0.9 ** **** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGTGGCTG consensus C C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------- chr16:34943266-34943285 + 6 9.44e-06 aaaac ggtggctg ctactgt chr2:90908098-90908117 - 11 9.44e-06 TG GGTGGCTG GCTGGCTTGG chr22:10606843-10606862 + 2 1.89e-05 t ggtggctc atgcctgtag chr22:7633373-7633392 - 12 1.89e-05 T GGTGGCTC ATGCCTGTAG chr22:7555561-7555584 + 6 1.89e-05 ggcat ggtggcTC AGAAATATTC chr22:3763091-3763110 + 2 1.89e-05 t ggtggctc atgcctgtag chr22:359496-359515 - 12 1.89e-05 T GGTGGCTC ATGCCTGTAG chr21:8282395-8282414 + 2 1.89e-05 t ggtggctc atgcctgtag chr21:7316556-7316579 - 12 1.89e-05 GGCAT GGTGGCTC AGAAATATTC chr21:2261378-2261397 + 2 1.89e-05 t ggtggctc atgcctgtag chr21:290082-290101 - 12 1.89e-05 T GGTGGCTC ATGCCTGTAG chr17:19088623-19088642 - 10 1.89e-05 CGC GGTGGCTC ACTCCTGTA chr15:21444488-21444507 + 2 1.89e-05 t ggtggctc acgcttgcaa chr15:5279784-5279803 + 4 1.89e-05 gct ggtggctc acgcctgta chr15:5249372-5249391 + 4 1.89e-05 gct ggtggctc acgcctgta chr14:13885146-13885165 + 4 1.89e-05 cgc ggtggctc acgcctata chr14:4050233-4050256 + 6 1.89e-05 ggcat ggtggcTC AGAAATATTC chr14:1581993-1582012 + 2 1.89e-05 t ggtggctc atgcctgtag chr14:641223-641242 - 12 1.89e-05 T GGTGGCTC ATGCCTGTAG chr11:50336938-50336957 + 11 1.89e-05 ggttgggcac ggtggctc ac chr8:7372703-7372722 - 3 1.89e-05 GGCCAGGCAC GGTGGCTC AC chr4:49204947-49204966 + 6 1.89e-05 ggcat ggtggcTC AGAAATA chr20:25872157-25872176 + 4 2.65e-05 ggc ggcggctg gatccgtgg chr15:5603917-5603936 + 10 2.65e-05 cacagccca ggcggctg ccc chr19:38923808-38923827 - 1 4.58e-05 CCCGGGCAAC GGTGGCTT chr19:38918750-38918769 - 1 4.58e-05 CCCGGGCAAC GGTGGCTT chr19:38880786-38880805 - 1 4.58e-05 CCCGGGCAAC GGTGGCTT chr19:38830164-38830183 - 1 4.58e-05 CCCGGGCAAC GGTGGCTT chr8:7642885-7642904 - 9 4.58e-05 TTCA GGTGGCTT TTTTTTTT chr2:94946986-94947005 + 13 4.58e-05 agtggtgcat ggcggctc chr2:94749424-94749443 - 1 4.58e-05 AGTGGTGCAT GGCGGCTC chr19:53100774-53100793 + 9 5.52e-05 gctactca ggaggctg agat chr19:53097712-53097731 + 9 5.52e-05 gctactca ggaggctg agat chr16:35124360-35124379 + 9 5.52e-05 gggagggt ggaggctg cagt chr16:35086188-35086207 + 9 5.52e-05 aggagggt ggaggctg cagt chr15:20778420-20778439 + 5 5.52e-05 AACT GGAggctg ttttagtt chr13:10598703-10598722 - 7 5.52e-05 TACTAG GGAGGCTG AGGCAG chr16:35062349-35062368 + 12 7.41e-05 ggctggcttg gctggctg g chr16:34778626-34778647 - 2 7.41e-05 TCTCTTTCCG GCTGGCTG G chr16:34778574-34778593 - 2 7.41e-05 GGCTTGGCTA GCTGGCTG C chr16:33648789-33648808 + 10 7.41e-05 cgtggcttg gctggctg gct chr15:20144753-20144772 - 4 7.41e-05 GCTGGCTAG GCTGGCTG GCT chr2:90846272-90846291 - 1 7.41e-05 GGCTGCCTTG GCTGGCTG chr14:13613883-13613902 + 7 1.14e-04 GCCCCA GGTGCCTC Accagc chr14:13528002-13528021 - 9 1.14e-04 CACA GGTGCCTC ACCTATCC chr14:13527762-13527781 - 13 1.14e-04 . GGTGCCTC ACTAGCTACT chr14:2933387-2933406 + 1 1.14e-04 . ggtgcctc acctctcctc chr8:86943918-86943937 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86931728-86931747 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86907350-86907369 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86883245-86883264 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86374671-86374690 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86350293-86350312 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86325914-86325933 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr8:86313722-86313741 + 3 1.14e-04 gt ggtgcctc tACAGAAAAA chr22:19068549-19068568 - 7 1.45e-04 GGGCTA GGTGGCAG GCGCCT chr18:47158725-47158744 - 4 1.45e-04 GAGGGCTGA GGTGGCAG GAT chr22:12222423-12222442 - 13 1.54e-04 . GGTGGCAC ACATGTGTAA chr22:4408396-4408415 + 1 1.54e-04 . GGTGGCAC ACCAttctgc chr17:19137207-19137231 - 13 1.54e-04 GTGCG GGTGGCAC GCCTGTAATC chr17:19011403-19011422 + 6 1.54e-04 gtgcg ggtggcac gcctgta chr16:28923832-28923851 - 3 1.54e-04 ATCTGTGCAT GGTGGCAC CT chr15:17158384-17158416 + 10 1.54e-04 agcagggca ggtgGCAC CAACAGCGGG chr9:42020851-42020897 + 24 1.54e-04 gagcagggca ggtgGCAC CAAGAGTGGG chr19:40106165-40106193 + 13 1.69e-04 gcttcagggc gccggctg gcctctccg chr19:40103710-40103729 + 4 1.69e-04 gat gccggctg ggctgcgcg chr19:40098652-40098671 + 13 1.69e-04 gcttcgggat gccggctg chr19:40096124-40096143 + 13 1.69e-04 gcttcgggat gccggctg chr19:40083510-40083529 + 13 1.69e-04 gcttcgggat gccggctg chr19:40050704-40050723 + 4 1.69e-04 gat gccggctg ggctgcgcg chr2:89593526-89593545 - 5 1.69e-04 CGCCTCTC GGCGCCTG CGCC chr22:10592673-10592692 - 8 1.91e-04 AATGA GGAGGCTT CCTGATT chr22:7647648-7647667 + 6 1.91e-04 aatga ggaggctt cctgatt chr21:8268226-8268245 - 8 1.91e-04 AATGA GGAGGCTT CCTGATT chr21:297828-297847 + 8 1.91e-04 ataatga ggaggctt cctga chr19:50948389-50948408 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50943003-50943022 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50937609-50937628 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50926832-50926851 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50921445-50921464 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50916053-50916072 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50910662-50910681 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50905281-50905300 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50899905-50899924 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50894529-50894548 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50889172-50889191 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50883824-50883843 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50878465-50878484 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr19:50873112-50873131 - 4 1.91e-04 CTCTTGGCA GGCGACTG TAA chr14:5791482-5791501 - 8 1.91e-04 AATGA GGAGGCTT CCTGATT chr13:11156660-11156679 + 6 1.91e-04 aatga ggaggctt cctgatt chr21:6311019-6311038 + 9 2.29e-04 cCTTCCTT GGTGCCTT CTCG chr21:3126332-3126351 + 9 2.29e-04 cCTTCCTT GGTGCCTT CTCG chr16:33665745-33665764 + 7 2.29e-04 tggatg gctggctt ggctgg chr13:9982797-9982816 + 9 2.29e-04 cCTTCCTT GGTGCCTT CTCG chr2:90909273-90909292 - 3 2.29e-04 TCTCTTTCCA GCTGGCTT GG chr9:79724262-79724281 + 10 2.53e-04 gttgaagcg ggtgactt aat chr9:77840203-77840222 - 4 2.53e-04 GTTGAAGCG GGTGACTT AAT chr9:77833996-77834015 - 4 2.53e-04 GTTGAAGCG GGTGACTT AAT chr9:77827788-77827807 - 4 2.53e-04 GTTGAAGCG GGTGACTT AAT chr9:40320553-40320572 + 10 2.53e-04 gttgaagcg ggTGACTT AAT chr22:19161956-19161975 + 8 2.72e-04 cctcccg agtggctg ggact chr22:19070332-19070351 - 6 2.72e-04 CCTCCCG AGTGGCTG GGACT chr8:86381101-86381124 + 16 2.72e-04 ttcaacctgC AGtggctg t chr21:8810566-8810585 + 4 3.22e-04 ccc ggtgGCAT CACCCCCGC chr14:8395155-8395174 - 10 3.22e-04 CCC GGTGGCAT CACCCCCAC chr13:11721122-11721141 + 4 3.22e-04 ccc ggtgGCAT CACCCCCGC chr2:91729321-91729340 + 8 3.22e-04 GACGTTT GCAggctg gacgc chr2:90823650-90823669 - 7 3.22e-04 ACGTTT GCAGGCTG GACGCG chr2:90036522-90036541 + 8 3.22e-04 GACGTTT GCAggctg gacgc chr2:89704881-89704900 - 7 3.22e-04 ACGTTT GCAGGCTG GACGCG chr1:16483233-16483252 - 1 3.22e-04 ATCCTGGAGG AGTGGCTC chr1:16361339-16361358 + 13 3.22e-04 atcctggagg agtggctc chr2:90843359-90843378 - 10 3.74e-04 TTG GCTGACTG GCTTGGCTG chr5:75794-75813 - 2 3.95e-04 ATGTCTGCTC GCTGCCTC T chr8:86938162-86938181 + 11 4.35e-04 cttcaacctg ggaggcag ag chr8:86384190-86384209 + 11 4.35e-04 cttcaacctg ggaggcag ag chr20:31506810-31506829 - 3 4.75e-04 TGGCACCCCT GGTGGGTG TC chr15:15361975-15361994 + 8 4.75e-04 cactcca ggtgggtg caatt chr19:39943925-39943944 - 13 5.06e-04 . AGCGGCTG ACACTAAGAA chr19:38984851-38984870 + 1 5.06e-04 . agcggctg ACACTAAGAA chr17:37341695-37341714 + 5 5.34e-04 gcag ggtgggtc ccttctga chr16:35576994-35577015 - 14 5.99e-04 G GATGGCTG ATGTGCAGCA chr16:34171771-34171792 - 14 5.99e-04 G GATGGCTG ATGTGCAGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:34943266-34943285 9.4e-06 5_[+10]_7 chr2:90908098-90908117 9.4e-06 10_[-10]_2 chr22:10606843-10606862 1.9e-05 1_[+10]_11 chr22:7633373-7633392 1.9e-05 11_[-10]_1 chr22:7555561-7555584 1.9e-05 5_[+10]_11 chr22:3763091-3763110 1.9e-05 1_[+10]_11 chr22:359496-359515 1.9e-05 11_[-10]_1 chr21:8282395-8282414 1.9e-05 1_[+10]_11 chr21:7316556-7316579 1.9e-05 11_[-10]_5 chr21:2261378-2261397 1.9e-05 1_[+10]_11 chr21:290082-290101 1.9e-05 11_[-10]_1 chr17:19088623-19088642 1.9e-05 9_[-10]_3 chr15:21444488-21444507 1.9e-05 1_[+10]_11 chr15:5279784-5279803 1.9e-05 3_[+10]_9 chr15:5249372-5249391 1.9e-05 3_[+10]_9 chr14:13885146-13885165 1.9e-05 3_[+10]_9 chr14:4050233-4050256 1.9e-05 5_[+10]_11 chr14:1581993-1582012 1.9e-05 1_[+10]_11 chr14:641223-641242 1.9e-05 11_[-10]_1 chr11:50336938-50336957 1.9e-05 10_[+10]_2 chr8:7372703-7372722 1.9e-05 2_[-10]_10 chr4:49204947-49204966 1.9e-05 5_[+10]_7 chr20:25872157-25872176 2.6e-05 3_[+10]_9 chr15:5603917-5603936 2.6e-05 9_[+10]_3 chr19:38923808-38923827 4.6e-05 [-10]_12 chr19:38918750-38918769 4.6e-05 [-10]_12 chr19:38880786-38880805 4.6e-05 [-10]_12 chr19:38830164-38830183 4.6e-05 [-10]_12 chr8:7642885-7642904 4.6e-05 8_[-10]_4 chr2:94946986-94947005 4.6e-05 12_[+10] chr2:94749424-94749443 4.6e-05 [-10]_12 chr19:53100774-53100793 5.5e-05 8_[+10]_4 chr19:53097712-53097731 5.5e-05 8_[+10]_4 chr16:35124360-35124379 5.5e-05 8_[+10]_4 chr16:35086188-35086207 5.5e-05 8_[+10]_4 chr15:20778420-20778439 5.5e-05 4_[+10]_8 chr13:10598703-10598722 5.5e-05 6_[-10]_6 chr16:35062349-35062368 7.4e-05 11_[+10]_1 chr16:34778626-34778647 7.4e-05 1_[-10]_13 chr16:34778574-34778593 7.4e-05 1_[-10]_11 chr16:33648789-33648808 7.4e-05 9_[+10]_3 chr15:20144753-20144772 7.4e-05 3_[-10]_9 chr2:90846272-90846291 7.4e-05 [-10]_12 chr14:13613883-13613902 0.00011 6_[+10]_6 chr14:13528002-13528021 0.00011 8_[-10]_4 chr14:13527762-13527781 0.00011 12_[-10] chr14:2933387-2933406 0.00011 [+10]_12 chr8:86943918-86943937 0.00011 2_[+10]_10 chr8:86931728-86931747 0.00011 2_[+10]_10 chr8:86907350-86907369 0.00011 2_[+10]_10 chr8:86883245-86883264 0.00011 2_[+10]_10 chr8:86374671-86374690 0.00011 2_[+10]_10 chr8:86350293-86350312 0.00011 2_[+10]_10 chr8:86325914-86325933 0.00011 2_[+10]_10 chr8:86313722-86313741 0.00011 2_[+10]_10 chr22:19068549-19068568 0.00014 6_[-10]_6 chr18:47158725-47158744 0.00014 3_[-10]_9 chr22:12222423-12222442 0.00015 12_[-10] chr22:4408396-4408415 0.00015 [+10]_12 chr17:19137207-19137231 0.00015 12_[-10]_5 chr17:19011403-19011422 0.00015 5_[+10]_7 chr16:28923832-28923851 0.00015 2_[-10]_10 chr15:17158384-17158416 0.00015 9_[+10]_16 chr9:42020851-42020897 0.00015 23_[+10]_16 chr19:40106165-40106193 0.00017 12_[+10]_9 chr19:40103710-40103729 0.00017 3_[+10]_9 chr19:40098652-40098671 0.00017 12_[+10] chr19:40096124-40096143 0.00017 12_[+10] chr19:40083510-40083529 0.00017 12_[+10] chr19:40050704-40050723 0.00017 3_[+10]_9 chr2:89593526-89593545 0.00017 4_[-10]_8 chr22:10592673-10592692 0.00019 7_[-10]_5 chr22:7647648-7647667 0.00019 5_[+10]_7 chr21:8268226-8268245 0.00019 7_[-10]_5 chr21:297828-297847 0.00019 7_[+10]_5 chr19:50948389-50948408 0.00019 3_[-10]_9 chr19:50943003-50943022 0.00019 3_[-10]_9 chr19:50937609-50937628 0.00019 3_[-10]_9 chr19:50926832-50926851 0.00019 3_[-10]_9 chr19:50921445-50921464 0.00019 3_[-10]_9 chr19:50916053-50916072 0.00019 3_[-10]_9 chr19:50910662-50910681 0.00019 3_[-10]_9 chr19:50905281-50905300 0.00019 3_[-10]_9 chr19:50899905-50899924 0.00019 3_[-10]_9 chr19:50894529-50894548 0.00019 3_[-10]_9 chr19:50889172-50889191 0.00019 3_[-10]_9 chr19:50883824-50883843 0.00019 3_[-10]_9 chr19:50878465-50878484 0.00019 3_[-10]_9 chr19:50873112-50873131 0.00019 3_[-10]_9 chr14:5791482-5791501 0.00019 7_[-10]_5 chr13:11156660-11156679 0.00019 5_[+10]_7 chr21:6311019-6311038 0.00023 8_[+10]_4 chr21:3126332-3126351 0.00023 8_[+10]_4 chr16:33665745-33665764 0.00023 6_[+10]_6 chr13:9982797-9982816 0.00023 8_[+10]_4 chr2:90909273-90909292 0.00023 2_[-10]_10 chr9:79724262-79724281 0.00025 9_[+10]_3 chr9:77840203-77840222 0.00025 3_[-10]_9 chr9:77833996-77834015 0.00025 3_[-10]_9 chr9:77827788-77827807 0.00025 3_[-10]_9 chr9:40320553-40320572 0.00025 9_[+10]_3 chr22:19161956-19161975 0.00027 7_[+10]_5 chr22:19070332-19070351 0.00027 5_[-10]_7 chr8:86381101-86381124 0.00027 15_[+10]_1 chr21:8810566-8810585 0.00032 3_[+10]_9 chr14:8395155-8395174 0.00032 9_[-10]_3 chr13:11721122-11721141 0.00032 3_[+10]_9 chr2:91729321-91729340 0.00032 7_[+10]_5 chr2:90823650-90823669 0.00032 6_[-10]_6 chr2:90036522-90036541 0.00032 7_[+10]_5 chr2:89704881-89704900 0.00032 6_[-10]_6 chr1:16483233-16483252 0.00032 [-10]_12 chr1:16361339-16361358 0.00032 12_[+10] chr2:90843359-90843378 0.00037 9_[-10]_3 chr5:75794-75813 0.0004 1_[-10]_11 chr8:86938162-86938181 0.00044 10_[+10]_2 chr8:86384190-86384209 0.00044 10_[+10]_2 chr20:31506810-31506829 0.00048 2_[-10]_10 chr15:15361975-15361994 0.00048 7_[+10]_5 chr19:39943925-39943944 0.00051 12_[-10] chr19:38984851-38984870 0.00051 [+10]_12 chr17:37341695-37341714 0.00053 4_[+10]_8 chr16:35576994-35577015 0.0006 13_[-10]_1 chr16:34171771-34171792 0.0006 13_[-10]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTGGCTS width=8 seqs=124 chr16:34943266-34943285 ( 6) GGTGGCTG 1 chr2:90908098-90908117 ( 11) GGTGGCTG 1 chr22:10606843-10606862 ( 2) GGTGGCTC 1 chr22:7633373-7633392 ( 12) GGTGGCTC 1 chr22:7555561-7555584 ( 6) GGTGGCTC 1 chr22:3763091-3763110 ( 2) GGTGGCTC 1 chr22:359496-359515 ( 12) GGTGGCTC 1 chr21:8282395-8282414 ( 2) GGTGGCTC 1 chr21:7316556-7316579 ( 12) GGTGGCTC 1 chr21:2261378-2261397 ( 2) GGTGGCTC 1 chr21:290082-290101 ( 12) GGTGGCTC 1 chr17:19088623-19088642 ( 10) GGTGGCTC 1 chr15:21444488-21444507 ( 2) GGTGGCTC 1 chr15:5279784-5279803 ( 4) GGTGGCTC 1 chr15:5249372-5249391 ( 4) GGTGGCTC 1 chr14:13885146-13885165 ( 4) GGTGGCTC 1 chr14:4050233-4050256 ( 6) GGTGGCTC 1 chr14:1581993-1582012 ( 2) GGTGGCTC 1 chr14:641223-641242 ( 12) GGTGGCTC 1 chr11:50336938-50336957 ( 11) GGTGGCTC 1 chr8:7372703-7372722 ( 3) GGTGGCTC 1 chr4:49204947-49204966 ( 6) GGTGGCTC 1 chr20:25872157-25872176 ( 4) GGCGGCTG 1 chr15:5603917-5603936 ( 10) GGCGGCTG 1 chr19:38923808-38923827 ( 1) GGTGGCTT 1 chr19:38918750-38918769 ( 1) GGTGGCTT 1 chr19:38880786-38880805 ( 1) GGTGGCTT 1 chr19:38830164-38830183 ( 1) GGTGGCTT 1 chr8:7642885-7642904 ( 9) GGTGGCTT 1 chr2:94946986-94947005 ( 13) GGCGGCTC 1 chr2:94749424-94749443 ( 1) GGCGGCTC 1 chr19:53100774-53100793 ( 9) GGAGGCTG 1 chr19:53097712-53097731 ( 9) GGAGGCTG 1 chr16:35124360-35124379 ( 9) GGAGGCTG 1 chr16:35086188-35086207 ( 9) GGAGGCTG 1 chr15:20778420-20778439 ( 5) GGAGGCTG 1 chr13:10598703-10598722 ( 7) GGAGGCTG 1 chr16:35062349-35062368 ( 12) GCTGGCTG 1 chr16:34778626-34778647 ( 2) GCTGGCTG 1 chr16:34778574-34778593 ( 2) GCTGGCTG 1 chr16:33648789-33648808 ( 10) GCTGGCTG 1 chr15:20144753-20144772 ( 4) GCTGGCTG 1 chr2:90846272-90846291 ( 1) GCTGGCTG 1 chr14:13613883-13613902 ( 7) GGTGCCTC 1 chr14:13528002-13528021 ( 9) GGTGCCTC 1 chr14:13527762-13527781 ( 13) GGTGCCTC 1 chr14:2933387-2933406 ( 1) GGTGCCTC 1 chr8:86943918-86943937 ( 3) GGTGCCTC 1 chr8:86931728-86931747 ( 3) GGTGCCTC 1 chr8:86907350-86907369 ( 3) GGTGCCTC 1 chr8:86883245-86883264 ( 3) GGTGCCTC 1 chr8:86374671-86374690 ( 3) GGTGCCTC 1 chr8:86350293-86350312 ( 3) GGTGCCTC 1 chr8:86325914-86325933 ( 3) GGTGCCTC 1 chr8:86313722-86313741 ( 3) GGTGCCTC 1 chr22:19068549-19068568 ( 7) GGTGGCAG 1 chr18:47158725-47158744 ( 4) GGTGGCAG 1 chr22:12222423-12222442 ( 13) GGTGGCAC 1 chr22:4408396-4408415 ( 1) GGTGGCAC 1 chr17:19137207-19137231 ( 13) GGTGGCAC 1 chr17:19011403-19011422 ( 6) GGTGGCAC 1 chr16:28923832-28923851 ( 3) GGTGGCAC 1 chr15:17158384-17158416 ( 10) GGTGGCAC 1 chr9:42020851-42020897 ( 24) GGTGGCAC 1 chr19:40106165-40106193 ( 13) GCCGGCTG 1 chr19:40103710-40103729 ( 4) GCCGGCTG 1 chr19:40098652-40098671 ( 13) GCCGGCTG 1 chr19:40096124-40096143 ( 13) GCCGGCTG 1 chr19:40083510-40083529 ( 13) GCCGGCTG 1 chr19:40050704-40050723 ( 4) GCCGGCTG 1 chr2:89593526-89593545 ( 5) GGCGCCTG 1 chr22:10592673-10592692 ( 8) GGAGGCTT 1 chr22:7647648-7647667 ( 6) GGAGGCTT 1 chr21:8268226-8268245 ( 8) GGAGGCTT 1 chr21:297828-297847 ( 8) GGAGGCTT 1 chr19:50948389-50948408 ( 4) GGCGACTG 1 chr19:50943003-50943022 ( 4) GGCGACTG 1 chr19:50937609-50937628 ( 4) GGCGACTG 1 chr19:50926832-50926851 ( 4) GGCGACTG 1 chr19:50921445-50921464 ( 4) GGCGACTG 1 chr19:50916053-50916072 ( 4) GGCGACTG 1 chr19:50910662-50910681 ( 4) GGCGACTG 1 chr19:50905281-50905300 ( 4) GGCGACTG 1 chr19:50899905-50899924 ( 4) GGCGACTG 1 chr19:50894529-50894548 ( 4) GGCGACTG 1 chr19:50889172-50889191 ( 4) GGCGACTG 1 chr19:50883824-50883843 ( 4) GGCGACTG 1 chr19:50878465-50878484 ( 4) GGCGACTG 1 chr19:50873112-50873131 ( 4) GGCGACTG 1 chr14:5791482-5791501 ( 8) GGAGGCTT 1 chr13:11156660-11156679 ( 6) GGAGGCTT 1 chr21:6311019-6311038 ( 9) GGTGCCTT 1 chr21:3126332-3126351 ( 9) GGTGCCTT 1 chr16:33665745-33665764 ( 7) GCTGGCTT 1 chr13:9982797-9982816 ( 9) GGTGCCTT 1 chr2:90909273-90909292 ( 3) GCTGGCTT 1 chr9:79724262-79724281 ( 10) GGTGACTT 1 chr9:77840203-77840222 ( 4) GGTGACTT 1 chr9:77833996-77834015 ( 4) GGTGACTT 1 chr9:77827788-77827807 ( 4) GGTGACTT 1 chr9:40320553-40320572 ( 10) GGTGACTT 1 chr22:19161956-19161975 ( 8) AGTGGCTG 1 chr22:19070332-19070351 ( 6) AGTGGCTG 1 chr8:86381101-86381124 ( 16) AGTGGCTG 1 chr21:8810566-8810585 ( 4) GGTGGCAT 1 chr14:8395155-8395174 ( 10) GGTGGCAT 1 chr13:11721122-11721141 ( 4) GGTGGCAT 1 chr2:91729321-91729340 ( 8) GCAGGCTG 1 chr2:90823650-90823669 ( 7) GCAGGCTG 1 chr2:90036522-90036541 ( 8) GCAGGCTG 1 chr2:89704881-89704900 ( 7) GCAGGCTG 1 chr1:16483233-16483252 ( 1) AGTGGCTC 1 chr1:16361339-16361358 ( 13) AGTGGCTC 1 chr2:90843359-90843378 ( 10) GCTGACTG 1 chr5:75794-75813 ( 2) GCTGCCTC 1 chr8:86938162-86938181 ( 11) GGAGGCAG 1 chr8:86384190-86384209 ( 11) GGAGGCAG 1 chr20:31506810-31506829 ( 3) GGTGGGTG 1 chr15:15361975-15361994 ( 8) GGTGGGTG 1 chr19:39943925-39943944 ( 13) AGCGGCTG 1 chr19:38984851-38984870 ( 1) AGCGGCTG 1 chr17:37341695-37341714 ( 5) GGTGGGTC 1 chr16:35576994-35577015 ( 14) GATGGCTG 1 chr16:34171771-34171792 ( 14) GATGGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 36489 bayes= 9.36639 E= 3.0e+022 -230 -1360 208 -1360 -410 -47 188 -1360 -93 -3 -1360 120 -1360 -1360 217 -1360 -78 -70 166 -1360 -1360 213 -320 -1360 -130 -1360 -1360 168 -1360 70 99 -52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 124 E= 3.0e+022 0.056452 0.000000 0.943548 0.000000 0.016129 0.161290 0.822581 0.000000 0.145161 0.217742 0.000000 0.637097 0.000000 0.000000 1.000000 0.000000 0.161290 0.137097 0.701613 0.000000 0.000000 0.975806 0.024194 0.000000 0.112903 0.000000 0.000000 0.887097 0.000000 0.362903 0.443548 0.193548 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGCTS MEME-10 regular expression -------------------------------------------------------------------------------- GG[TC]GGCT[GC] -------------------------------------------------------------------------------- Time 174.28 secs. ******************************************************************************** ******************************************************************************** MOTIF ATNYCTRYAAWKMTA MEME-11 width = 15 sites = 99 llr = 768 E-value = 9.8e+021 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 Description -------------------------------------------------------------------------------- Simplified A a2313251a66:627 pos.-specific C :3336:14:2:24:3 probability G ::2:1131:1:3::: matrix T :626:725:145:7: bits 2.2 1.9 1.7 * * 1.5 * * Relative 1.3 * * Entropy 1.1 * * * * (11.2 bits) 0.9 * * * *** 0.6 * *** * * *** 0.4 ** *** ******** 0.2 ** ************ 0.0 --------------- Multilevel ATCTCTATAAATATA consensus CACA GC CTGCAC sequence T C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr7:59917206-59917225 + 6 1.29e-07 gtacc atctctataaTGCTA chr7:59840664-59840683 - 1 1.29e-07 GTACC ATCTCTATAATGCTA chr7:58599626-58599645 + 6 1.29e-07 gtacc atctctataaTGCTA chr1:143718316-143718335 + 6 1.29e-07 gtacc atctctataaTGCTA chr1:143448653-143448672 - 1 1.29e-07 GTACC ATCTCTATAATGCTA chr1:142258620-142258639 + 6 1.29e-07 gtacc atctctataaTGCTA chr1:128927066-128927085 + 6 1.29e-07 atacc atctctataaTGCTA chr1:128860309-128860328 - 1 1.29e-07 GTACC ATCTCTATAATGCTA chr22:11463865-11463887 + 6 3.38e-07 gtacc atctctgtAATGCTA ATC chr16:33944894-33944942 + 9 3.38e-07 aaatatat atgtctatacatata tTTTTGCTCC chr14:8686224-8686243 + 6 3.38e-07 gtacc atctctgtAATGCTA chr14:8511959-8511978 - 1 3.38e-07 GTACC ATCTCTGTAATGCTA chr16:34240415-34240434 - 1 5.88e-07 GTACC ATCCCTATAATGCTA chr16:33496305-33496324 - 1 5.88e-07 GTACC ATCCCTATAATGCTA chr16:33202795-33202814 + 6 5.88e-07 gtacC ATCCCTATAATGCTA chr7:59853899-59853921 + 3 1.92e-06 tg aagtctgcaaatata attttg chr7:59197081-59197100 + 3 1.92e-06 tg aagtctgcaaatata att chr7:58344596-58344615 + 3 1.92e-06 tg aagtctgcaaatata att chr21:7087172-7087206 + 8 5.27e-06 aatatac atatatatacatata aatgtatata chr14:5016435-5016478 - 20 5.27e-06 AACAATATAC ATATATATACATATA AATGTATATA chr7:60027145-60027164 - 4 6.32e-06 TG AAGTCTGCAAACATA ATT chr17:22305867-22305886 - 1 7.54e-06 GTACC ATCTGTATAATGCTA chr7:59182536-59182555 - 1 7.54e-06 GTACC ATCTGTATAATGCTA chr9:40549924-40549943 + 2 8.98e-06 a atatcttcaaataaa aact chr7:59125561-59125580 + 3 8.98e-06 tg atgtcggcaaatata att chr7:58874914-58874933 + 3 8.98e-06 tg atgtcggcaaatata att chr7:58633705-58633724 - 4 8.98e-06 TG ATGTCGGCAAATATA ATT chr15:17207813-17207833 + 3 1.06e-05 TT AATTATAtaaatata tagg chr9:80289031-80289050 - 6 1.24e-05 . ACTTCTATACAGATC ATGTC chr9:78332516-78332535 + 1 1.24e-05 . ACTTCtatacagatc atgtc chr9:40856319-40856338 + 1 1.24e-05 . ACTTCtatacagatc atgtc chr15:5869989-5870008 + 3 1.70e-05 cc atctcaatatatata tat chr13:10597966-10597985 + 3 1.70e-05 cc atctcaatatatata tat chr22:6543509-6543532 - 3 1.97e-05 GTAAAGT ATATATATATATATA TA chr9:77604826-77604845 - 1 2.62e-05 AGGAA ATATCTTCACATAAA chr9:77336677-77336696 - 5 2.62e-05 A ATATCTTCACATAAA ATCT chr9:42467686-42467705 - 5 2.62e-05 A ATATCTTCACATAAA ATCT chr8:86780260-86780279 - 1 3.00e-05 CTTGA ACTCCAACAATTCTA chr8:86755873-86755892 - 1 3.00e-05 CTTGA ACTCCAACAATTCTA chr8:86743681-86743700 - 1 3.00e-05 CTTGA ACTCCAACAATTCTA chr8:86700507-86700526 + 6 3.00e-05 cttga actccAACAATTCTA chr8:86524754-86524773 - 1 3.00e-05 CTTGA ACTCCAACAATTCTA chr8:86125135-86125154 - 1 3.00e-05 CTTGA ACTCCAACAATTCTA chr8:86087088-86087107 - 1 3.00e-05 CTTGA ACTCCAACAATTCTA chr13:14601323-14601342 + 5 3.90e-05 actt atatatgaaaatata t chrX:48804550-48804569 - 4 5.01e-05 TC ACGCCTGCAATCCAA ACA chrX:48776005-48776024 - 4 5.01e-05 TC ACGCCTGCAATCCAA ACA chr9:42728889-42728908 - 1 6.37e-05 AGGAA ATAACTTCAAATAAA chr21:7804960-7804991 + 10 9.89e-05 AGtatatat aacaatatacatata tatacatg chr22:11187506-11187525 + 1 1.21e-04 . ATACCTGTAgacctc tggtc chr21:8679872-8679891 + 1 1.21e-04 . ATACCTGTAgacctc tggtc chr17:27696627-27696646 - 2 1.21e-04 CTCC AAATATATAGAGATA T chr17:22319432-22319451 - 2 1.21e-04 TTCC AAATATATAGAGATA T chr14:3463195-3463214 + 4 1.21e-04 tat atacatttatatata ct chr13:11590320-11590339 + 1 1.21e-04 . ATACCTGTAgacctc tggtc chr13:10597997-10598016 + 4 1.21e-04 tat atacatttatatata ct chr14:3463161-3463180 + 6 1.34e-04 cctcc atctcaaaatatata chr22:12190591-12190610 - 5 1.47e-04 G ATGAATGCACATATC ACAA chr14:9468092-9468111 - 5 1.47e-04 G ATGAATGCACATATC ACAA chr16:35360884-35360904 - 7 2.12e-04 . ATGTGTAGAATCATC AATCTA chr16:33963185-33963205 - 7 2.12e-04 . ATGTGTAGAATCATC AATCTA chr15:82712853-82712872 + 3 2.12e-04 aa atatctataaatagc tgg chr9:80299579-80299598 - 3 2.31e-04 GAA ACTTGTTTAATGAAA GA chr9:40845926-40845945 + 4 2.31e-04 GAA ACTTGTTTaatgaaa ga chr7:59950504-59950523 - 4 2.31e-04 TG ATGTCAGCAAATACA ATT chr7:101590-101609 + 4 2.31e-04 aat aaataaataaTTCAA TG chr21:10718860-10718879 + 2 2.51e-04 g atgaatgcacacatc acaa chr19:8900134-8900153 + 1 2.51e-04 . atgcctgtaatccca gcgct chr13:13640946-13640965 + 2 2.51e-04 g atgaatgcacacatc acaa chr9:40541097-40541116 - 3 2.51e-04 GAC ATGAATGCACACATC AC chr16:34379680-34379717 - 1 2.73e-04 GGCGGGGGCA AAAAATATATATATA chr15:82750671-82750690 + 1 2.73e-04 . actcatttaatcctc atagc chr22:10474024-10474043 + 4 2.95e-04 taa attcctcgacacata ta chr22:9769817-9769836 + 4 2.95e-04 taa attcctcgacacata ta chr22:9097677-9097696 + 4 2.95e-04 taa attcctcgacacata ta chr22:5947277-5947296 - 5 2.95e-04 A ATTCCTCGACACATA CATC chr20:30449924-30449943 + 5 4.30e-04 CTGG ACGaatatatttctc a chrX:48861724-48861743 - 3 4.62e-04 AGA AATCCTATCAATAAA AT chrX:48852197-48852216 - 3 4.62e-04 AGA AATCCTATCAATAAA AT chr22:9958357-9958409 - 13 4.62e-04 TTAACAGGAG ACTTTTATACAGATA AATTTGCTTT chr20:31169142-31169162 + 5 4.62e-04 CTGG ACaaatatatttctc aa chr7:58875725-58875744 - 5 5.30e-04 C ACCCCTACAAAGAAG TGTG chr2:96379958-96379977 - 1 5.30e-04 CCAAG ATCACAGCACTGCAC chr7:59993601-59993621 + 4 5.66e-04 aaa aactcaaaaatgaac tca chr7:59929483-59929502 + 3 5.66e-04 aa aactcaaaaatgaac tca chr19:53225549-53225568 + 4 6.87e-04 aaa aaaaaaacaattcaa gg chr19:8866828-8866847 + 5 8.75e-04 ggca acatggtgaaagcta g chr19:8851905-8851924 + 5 8.75e-04 ggca acatggtgaaagcta g chr7:58915058-58915077 - 1 9.27e-04 ACCAG ATCTAGCAACATATA chr13:12975657-12975676 + 2 9.81e-04 g tcccctttaaatatc gcca chr21:10888583-10888602 + 5 1.04e-03 ttca acatacgcaaatcaa t chr22:18936398-18936417 + 6 1.10e-03 accag acaccataatacata chr22:7679729-7679748 - 3 1.10e-03 GAC AACCATTCAGATCAC AG chr7:58611243-58611262 + 5 1.58e-03 taaa aactcacaaatgaac t chr9:79942428-79942447 + 4 1.74e-03 gtg atgtgggcattcaac tc chr9:77603756-77603775 - 3 1.74e-03 GTG ATGTGGGCATTCAAC TC chr1:108356151-108356170 + 5 1.74e-03 tcaa acttctggcctcaaa c chr8:7372415-7372434 - 2 1.91e-03 TTAA AATAAATAAATGCTA T chr21:421445-421464 - 5 2.01e-03 G AACTGGGCAGATCAC TTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:59917206-59917225 1.3e-07 5_[+11] chr7:59840664-59840683 1.3e-07 [-11]_5 chr7:58599626-58599645 1.3e-07 5_[+11] chr1:143718316-143718335 1.3e-07 5_[+11] chr1:143448653-143448672 1.3e-07 [-11]_5 chr1:142258620-142258639 1.3e-07 5_[+11] chr1:128927066-128927085 1.3e-07 5_[+11] chr1:128860309-128860328 1.3e-07 [-11]_5 chr22:11463865-11463887 3.4e-07 5_[+11]_3 chr16:33944894-33944942 3.4e-07 8_[+11]_26 chr14:8686224-8686243 3.4e-07 5_[+11] chr14:8511959-8511978 3.4e-07 [-11]_5 chr16:34240415-34240434 5.9e-07 [-11]_5 chr16:33496305-33496324 5.9e-07 [-11]_5 chr16:33202795-33202814 5.9e-07 5_[+11] chr7:59853899-59853921 1.9e-06 2_[+11]_6 chr7:59197081-59197100 1.9e-06 2_[+11]_3 chr7:58344596-58344615 1.9e-06 2_[+11]_3 chr21:7087172-7087206 5.3e-06 7_[+11]_13 chr14:5016435-5016478 5.3e-06 19_[-11]_10 chr7:60027145-60027164 6.3e-06 3_[-11]_2 chr17:22305867-22305886 7.5e-06 [-11]_5 chr7:59182536-59182555 7.5e-06 [-11]_5 chr9:40549924-40549943 9e-06 1_[+11]_4 chr7:59125561-59125580 9e-06 2_[+11]_3 chr7:58874914-58874933 9e-06 2_[+11]_3 chr7:58633705-58633724 9e-06 3_[-11]_2 chr15:17207813-17207833 1.1e-05 2_[+11]_4 chr9:80289031-80289050 1.2e-05 5_[-11] chr9:78332516-78332535 1.2e-05 [+11]_5 chr9:40856319-40856338 1.2e-05 [+11]_5 chr15:5869989-5870008 1.7e-05 2_[+11]_3 chr13:10597966-10597985 1.7e-05 2_[+11]_3 chr22:6543509-6543532 2e-05 2_[-11]_7 chr9:77604826-77604845 2.6e-05 [-11]_5 chr9:77336677-77336696 2.6e-05 4_[-11]_1 chr9:42467686-42467705 2.6e-05 4_[-11]_1 chr8:86780260-86780279 3e-05 [-11]_5 chr8:86755873-86755892 3e-05 [-11]_5 chr8:86743681-86743700 3e-05 [-11]_5 chr8:86700507-86700526 3e-05 5_[+11] chr8:86524754-86524773 3e-05 [-11]_5 chr8:86125135-86125154 3e-05 [-11]_5 chr8:86087088-86087107 3e-05 [-11]_5 chr13:14601323-14601342 3.9e-05 4_[+11]_1 chrX:48804550-48804569 5e-05 3_[-11]_2 chrX:48776005-48776024 5e-05 3_[-11]_2 chr9:42728889-42728908 6.4e-05 [-11]_5 chr21:7804960-7804991 9.9e-05 9_[+11]_8 chr22:11187506-11187525 0.00012 [+11]_5 chr21:8679872-8679891 0.00012 [+11]_5 chr17:27696627-27696646 0.00012 1_[-11]_4 chr17:22319432-22319451 0.00012 1_[-11]_4 chr14:3463195-3463214 0.00012 3_[+11]_2 chr13:11590320-11590339 0.00012 [+11]_5 chr13:10597997-10598016 0.00012 3_[+11]_2 chr14:3463161-3463180 0.00013 5_[+11] chr22:12190591-12190610 0.00015 4_[-11]_1 chr14:9468092-9468111 0.00015 4_[-11]_1 chr16:35360884-35360904 0.00021 6_[-11] chr16:33963185-33963205 0.00021 6_[-11] chr15:82712853-82712872 0.00021 2_[+11]_3 chr9:80299579-80299598 0.00023 2_[-11]_3 chr9:40845926-40845945 0.00023 3_[+11]_2 chr7:59950504-59950523 0.00023 3_[-11]_2 chr7:101590-101609 0.00023 3_[+11]_2 chr21:10718860-10718879 0.00025 1_[+11]_4 chr19:8900134-8900153 0.00025 [+11]_5 chr13:13640946-13640965 0.00025 1_[+11]_4 chr9:40541097-40541116 0.00025 2_[-11]_3 chr16:34379680-34379717 0.00027 [-11]_23 chr15:82750671-82750690 0.00027 [+11]_5 chr22:10474024-10474043 0.0003 3_[+11]_2 chr22:9769817-9769836 0.0003 3_[+11]_2 chr22:9097677-9097696 0.0003 3_[+11]_2 chr22:5947277-5947296 0.0003 4_[-11]_1 chr20:30449924-30449943 0.00043 4_[+11]_1 chrX:48861724-48861743 0.00046 2_[-11]_3 chrX:48852197-48852216 0.00046 2_[-11]_3 chr22:9958357-9958409 0.00046 12_[-11]_26 chr20:31169142-31169162 0.00046 4_[+11]_2 chr7:58875725-58875744 0.00053 4_[-11]_1 chr2:96379958-96379977 0.00053 [-11]_5 chr7:59993601-59993621 0.00057 3_[+11]_3 chr7:59929483-59929502 0.00057 2_[+11]_3 chr19:53225549-53225568 0.00069 3_[+11]_2 chr19:8866828-8866847 0.00087 4_[+11]_1 chr19:8851905-8851924 0.00087 4_[+11]_1 chr7:58915058-58915077 0.00093 [-11]_5 chr13:12975657-12975676 0.00098 1_[+11]_4 chr21:10888583-10888602 0.001 4_[+11]_1 chr22:18936398-18936417 0.0011 5_[+11] chr22:7679729-7679748 0.0011 2_[-11]_3 chr7:58611243-58611262 0.0016 4_[+11]_1 chr9:79942428-79942447 0.0017 3_[+11]_2 chr9:77603756-77603775 0.0017 2_[-11]_3 chr1:108356151-108356170 0.0017 4_[+11]_1 chr8:7372415-7372434 0.0019 1_[-11]_4 chr21:421445-421464 0.002 4_[-11]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATNYCTRYAAWKMTA width=15 seqs=99 chr7:59917206-59917225 ( 6) ATCTCTATAATGCTA 1 chr7:59840664-59840683 ( 1) ATCTCTATAATGCTA 1 chr7:58599626-58599645 ( 6) ATCTCTATAATGCTA 1 chr1:143718316-143718335 ( 6) ATCTCTATAATGCTA 1 chr1:143448653-143448672 ( 1) ATCTCTATAATGCTA 1 chr1:142258620-142258639 ( 6) ATCTCTATAATGCTA 1 chr1:128927066-128927085 ( 6) ATCTCTATAATGCTA 1 chr1:128860309-128860328 ( 1) ATCTCTATAATGCTA 1 chr22:11463865-11463887 ( 6) ATCTCTGTAATGCTA 1 chr16:33944894-33944942 ( 9) ATGTCTATACATATA 1 chr14:8686224-8686243 ( 6) ATCTCTGTAATGCTA 1 chr14:8511959-8511978 ( 1) ATCTCTGTAATGCTA 1 chr16:34240415-34240434 ( 1) ATCCCTATAATGCTA 1 chr16:33496305-33496324 ( 1) ATCCCTATAATGCTA 1 chr16:33202795-33202814 ( 6) ATCCCTATAATGCTA 1 chr7:59853899-59853921 ( 3) AAGTCTGCAAATATA 1 chr7:59197081-59197100 ( 3) AAGTCTGCAAATATA 1 chr7:58344596-58344615 ( 3) AAGTCTGCAAATATA 1 chr21:7087172-7087206 ( 8) ATATATATACATATA 1 chr14:5016435-5016478 ( 20) ATATATATACATATA 1 chr7:60027145-60027164 ( 4) AAGTCTGCAAACATA 1 chr17:22305867-22305886 ( 1) ATCTGTATAATGCTA 1 chr7:59182536-59182555 ( 1) ATCTGTATAATGCTA 1 chr9:40549924-40549943 ( 2) ATATCTTCAAATAAA 1 chr7:59125561-59125580 ( 3) ATGTCGGCAAATATA 1 chr7:58874914-58874933 ( 3) ATGTCGGCAAATATA 1 chr7:58633705-58633724 ( 4) ATGTCGGCAAATATA 1 chr15:17207813-17207833 ( 3) AATTATATAAATATA 1 chr9:80289031-80289050 ( 6) ACTTCTATACAGATC 1 chr9:78332516-78332535 ( 1) ACTTCTATACAGATC 1 chr9:40856319-40856338 ( 1) ACTTCTATACAGATC 1 chr15:5869989-5870008 ( 3) ATCTCAATATATATA 1 chr13:10597966-10597985 ( 3) ATCTCAATATATATA 1 chr22:6543509-6543532 ( 3) ATATATATATATATA 1 chr9:77604826-77604845 ( 1) ATATCTTCACATAAA 1 chr9:77336677-77336696 ( 5) ATATCTTCACATAAA 1 chr9:42467686-42467705 ( 5) ATATCTTCACATAAA 1 chr8:86780260-86780279 ( 1) ACTCCAACAATTCTA 1 chr8:86755873-86755892 ( 1) ACTCCAACAATTCTA 1 chr8:86743681-86743700 ( 1) ACTCCAACAATTCTA 1 chr8:86700507-86700526 ( 6) ACTCCAACAATTCTA 1 chr8:86524754-86524773 ( 1) ACTCCAACAATTCTA 1 chr8:86125135-86125154 ( 1) ACTCCAACAATTCTA 1 chr8:86087088-86087107 ( 1) ACTCCAACAATTCTA 1 chr13:14601323-14601342 ( 5) ATATATGAAAATATA 1 chrX:48804550-48804569 ( 4) ACGCCTGCAATCCAA 1 chrX:48776005-48776024 ( 4) ACGCCTGCAATCCAA 1 chr9:42728889-42728908 ( 1) ATAACTTCAAATAAA 1 chr21:7804960-7804991 ( 10) AACAATATACATATA 1 chr22:11187506-11187525 ( 1) ATACCTGTAGACCTC 1 chr21:8679872-8679891 ( 1) ATACCTGTAGACCTC 1 chr17:27696627-27696646 ( 2) AAATATATAGAGATA 1 chr17:22319432-22319451 ( 2) AAATATATAGAGATA 1 chr14:3463195-3463214 ( 4) ATACATTTATATATA 1 chr13:11590320-11590339 ( 1) ATACCTGTAGACCTC 1 chr13:10597997-10598016 ( 4) ATACATTTATATATA 1 chr14:3463161-3463180 ( 6) ATCTCAAAATATATA 1 chr22:12190591-12190610 ( 5) ATGAATGCACATATC 1 chr14:9468092-9468111 ( 5) ATGAATGCACATATC 1 chr16:35360884-35360904 ( 7) ATGTGTAGAATCATC 1 chr16:33963185-33963205 ( 7) ATGTGTAGAATCATC 1 chr15:82712853-82712872 ( 3) ATATCTATAAATAGC 1 chr9:80299579-80299598 ( 3) ACTTGTTTAATGAAA 1 chr9:40845926-40845945 ( 4) ACTTGTTTAATGAAA 1 chr7:59950504-59950523 ( 4) ATGTCAGCAAATACA 1 chr7:101590-101609 ( 4) AAATAAATAATTCAA 1 chr21:10718860-10718879 ( 2) ATGAATGCACACATC 1 chr19:8900134-8900153 ( 1) ATGCCTGTAATCCCA 1 chr13:13640946-13640965 ( 2) ATGAATGCACACATC 1 chr9:40541097-40541116 ( 3) ATGAATGCACACATC 1 chr16:34379680-34379717 ( 1) AAAAATATATATATA 1 chr15:82750671-82750690 ( 1) ACTCATTTAATCCTC 1 chr22:10474024-10474043 ( 4) ATTCCTCGACACATA 1 chr22:9769817-9769836 ( 4) ATTCCTCGACACATA 1 chr22:9097677-9097696 ( 4) ATTCCTCGACACATA 1 chr22:5947277-5947296 ( 5) ATTCCTCGACACATA 1 chr20:30449924-30449943 ( 5) ACGAATATATTTCTC 1 chrX:48861724-48861743 ( 3) AATCCTATCAATAAA 1 chrX:48852197-48852216 ( 3) AATCCTATCAATAAA 1 chr22:9958357-9958409 ( 13) ACTTTTATACAGATA 1 chr20:31169142-31169162 ( 5) ACAAATATATTTCTC 1 chr7:58875725-58875744 ( 5) ACCCCTACAAAGAAG 1 chr2:96379958-96379977 ( 1) ATCACAGCACTGCAC 1 chr7:59993601-59993621 ( 4) AACTCAAAAATGAAC 1 chr7:59929483-59929502 ( 3) AACTCAAAAATGAAC 1 chr19:53225549-53225568 ( 4) AAAAAAACAATTCAA 1 chr19:8866828-8866847 ( 5) ACATGGTGAAAGCTA 1 chr19:8851905-8851924 ( 5) ACATGGTGAAAGCTA 1 chr7:58915058-58915077 ( 1) ATCTAGCAACATATA 1 chr13:12975657-12975676 ( 2) TCCCCTTTAAATATC 1 chr21:10888583-10888602 ( 5) ACATACGCAAATCAA 1 chr22:18936398-18936417 ( 6) ACACCATAATACATA 1 chr22:7679729-7679748 ( 3) AACCATTCAGATCAC 1 chr7:58611243-58611262 ( 5) AACTCACAAATGAAC 1 chr9:79942428-79942447 ( 4) ATGTGGGCATTCAAC 1 chr9:77603756-77603775 ( 3) ATGTGGGCATTCAAC 1 chr1:108356151-108356170 ( 5) ACTTCTGGCCTCAAA 1 chr8:7372415-7372434 ( 2) AATAAATAAATGCTA 1 chr21:421445-421464 ( 5) AACTGGGCAGATCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 18324 bayes= 8.50787 E= 9.8e+021 184 -1327 -1327 -477 -53 18 -1327 100 -13 40 0 -26 -108 40 -1327 105 -13 149 -100 -477 -53 -446 -129 135 81 -188 40 -78 -178 67 -129 78 181 -288 -1327 -1327 105 6 -166 -119 103 -1327 -1327 65 -1327 -7 54 74 108 89 -1327 -1327 -19 -346 -446 139 139 24 -446 -1327 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 99 E= 9.8e+021 0.989899 0.000000 0.000000 0.010101 0.191919 0.252525 0.000000 0.555556 0.252525 0.292929 0.222222 0.232323 0.131313 0.292929 0.000000 0.575758 0.252525 0.626263 0.111111 0.010101 0.191919 0.010101 0.090909 0.707071 0.484848 0.060606 0.292929 0.161616 0.080808 0.353535 0.090909 0.474747 0.969697 0.030303 0.000000 0.000000 0.575758 0.232323 0.070707 0.121212 0.565657 0.000000 0.000000 0.434343 0.000000 0.212121 0.323232 0.464646 0.585859 0.414141 0.000000 0.000000 0.242424 0.020202 0.010101 0.727273 0.727273 0.262626 0.010101 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATNYCTRYAAWKMTA MEME-11 regular expression -------------------------------------------------------------------------------- A[TC][CATG][TC][CA]T[AG][TC]A[AC][AT][TGC][AC][TA][AC] -------------------------------------------------------------------------------- Time 183.56 secs. ******************************************************************************** ******************************************************************************** MOTIF GKGGTGBR MEME-12 width = 8 sites = 103 llr = 771 E-value = 3.0e+031 ******************************************************************************** -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 Description -------------------------------------------------------------------------------- Simplified A :::1:::3 pos.-specific C 2::2::4: probability G 84a7:a36 matrix T :6::a:3: bits 2.2 * * 1.9 * ** 1.7 * ** 1.5 * ** Relative 1.3 * * ** Entropy 1.1 *** ** (10.8 bits) 0.9 ****** * 0.6 ****** * 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTGGTGCG consensus CG C TA sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------- chr22:6593427-6593446 + 6 9.44e-06 gtgca gtggtgcg atcttag chr21:7764799-7764818 - 9 9.44e-06 TGCA GTGGTGCG ATCTTGGG chr16:35061051-35061083 - 15 9.44e-06 CAGCCAAGCA GTGGTGCG ATCTCAGCTC chr15:5927024-5927043 + 8 9.44e-06 gagtgca gtggtgcg atctt chr14:3520144-3520163 + 8 9.44e-06 gagtgca gtggtgcg atctt chr13:10654977-10654996 + 8 9.44e-06 gagtgca gtggtgcg atctt chr21:211015-211034 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:187876-187895 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:180736-180755 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:173596-173615 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:166160-166179 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:158864-158883 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:151428-151447 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:144132-144151 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:136842-136861 - 4 2.88e-05 TGTGTGTGT GTGGTGTG AGG chr21:129407-129426 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:121976-121995 - 4 2.88e-05 TGTGTGTGT GTGGTGTG AGG chr21:114538-114557 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr21:107102-107121 - 6 2.88e-05 TGTGTGT GTGGTGTG AGGTA chr15:15500617-15500636 - 6 2.88e-05 AAATGCA GTGGTGTG ATCAG chr21:2358109-2358128 + 8 3.82e-05 agtgaaa gtggtggg cttgg chr2:98024063-98024082 + 11 4.76e-05 gcatatactc GGGgtgtg tg chr21:229845-229864 + 12 6.69e-05 tgcccgcctt gtggtgca c chr2:94946986-94947005 + 4 6.69e-05 gca gtggtgca tggcggctc chr2:94749424-94749443 - 10 6.69e-05 GCA GTGGTGCA TGGCGGCTC chr2:92029537-92029556 + 13 6.69e-05 ctggagtgca gtggtgca chr1:12663105-12663124 - 1 6.69e-05 ACTGGGCGTG GTGGTGCA chr15:15575424-15575455 - 19 9.53e-05 CTTTCC GGGGTGCA GAGACTTGTC chr7:76637704-76637723 + 10 9.53e-05 ttgaggtca ggggtgca aga chr7:76609719-76609738 + 10 9.53e-05 ttgaggtca ggggtgca aga chr22:3956206-3956225 + 9 1.25e-04 tgagttcg gtggtgta tcgt chr22:3943006-3943025 + 9 1.25e-04 tgagttcg gtggtgta tcgt chr17:19089004-19089053 + 23 1.25e-04 cttttagggc cgggtgcg ggtgcgccgc chr14:13144249-13144272 - 10 1.25e-04 TCGGGTT CGGGTGCG CCTCTTCGC chr8:12375484-12375504 + 6 1.25e-04 aagag gggctgcg ggagacag chr8:11704907-11704926 + 6 1.25e-04 AAGag gggctgcg ggagaca chr8:7343990-7344009 - 9 1.25e-04 AGAG GGGCTGCG GGAGACAG chr2:92184441-92184490 + 17 1.25e-04 GATTCGGGTT CGGgtgcg cctttcggcg chr2:90302942-90302969 + 16 1.25e-04 GATTCGGGTT CGGgtgcg cctct chr22:9748569-9748612 + 19 1.60e-04 atggagtgga ctggtgtg gattggagtg chr22:6609758-6609777 + 1 1.60e-04 . ctggtgtg agatggtatc chr16:80328126-80328145 - 10 1.60e-04 GAT GTGGTGGA GACAGGAGG chr15:21319103-21319122 + 7 1.60e-04 CCACAC CTggtgtg taccac chr15:5927263-5927282 - 2 1.60e-04 TCCACAAGGC CTGGTGTG G chr14:3520383-3520402 - 2 1.60e-04 TCCACAAGGC CTGGTGTG G chr13:10655216-10655235 - 2 1.60e-04 TCCACAAGGC CTGGTGTG G chr2:96380195-96380214 - 2 1.60e-04 TCAACAAGGC CTGGTGTG G chr22:9383602-9383621 - 2 1.91e-04 ACAACTACTG GTGCTGGG G chr22:9174347-9174366 + 9 1.91e-04 ctcccaaa gtgctggg atta chr22:6200154-6200173 - 2 1.91e-04 ACAACAATTG GTGCTGGG G chr21:6401041-6401060 - 4 1.91e-04 TCAGCGCCT GTGCTGGG CCG chr20:31464262-31464282 + 8 1.91e-04 GAGACTT GTGctggg cccact chr18:47209329-47209348 + 1 1.91e-04 . ctggtggg gaccttcttc chr18:47203414-47203433 + 1 1.91e-04 . ctggtggg gaccttcttc chr18:47197499-47197518 + 1 1.91e-04 . ctggtggg gaccttcttc chr22:16984686-16984705 + 11 2.19e-04 AATGAAATGA ggggtgga gc chr22:6599067-6599086 - 2 2.19e-04 AAATAAGAAC CGGGTGTG G chr22:6451818-6451837 + 11 2.19e-04 AATGAAATGA ggggtgga gc chr21:8779911-8779930 - 3 2.19e-04 AATGAAATGA GGGGTGGA GC chr21:7759147-7759166 + 12 2.19e-04 AAATAAGAAc cgggtgtg g chr16:34185873-34185899 + 9 2.19e-04 tgaaatga ggggtgga gccaagatgg chr16:33441838-33441858 + 11 2.19e-04 aatgaaatga ggggtgga gcc chr15:5932735-5932754 - 2 2.19e-04 AAATAAGAAC CGGGTGTG G chr15:5603917-5603936 - 1 2.19e-04 GCAGCCGCCT GGGCTGTG chr14:3525789-3525808 - 2 2.19e-04 AAATAAGAAC CGGGTGTG G chr13:11690466-11690485 - 3 2.19e-04 AATGAAATGA GGGGTGGA GC chr13:10660691-10660710 - 2 2.19e-04 AAATAAGAAC CGGGTGTG G chr7:58335062-58335081 + 9 2.19e-04 TGAAATGA ggggtgga gcca chr2:96386430-96386449 - 2 2.19e-04 AAATAAGAAC CGGGTGTG G chr1:128807220-128807239 + 11 2.19e-04 aatgaaatga ggggtgga gc chr1:126884029-126884048 + 11 2.19e-04 aatgaaatga ggggtgga gc chr16:34725217-34725236 - 12 2.34e-04 A GGGCTGGG CCAACGTTGG chr13:5338388-5338417 + 17 2.34e-04 tctaccacaa gggctGGG GGTGAa chr22:12326831-12326852 + 12 2.69e-04 ACCTttcttt gtgatgcg tta chr20:31492575-31492607 - 4 2.69e-04 ACCTTTCTTT GTGATGCG TTA chr16:35576994-35577015 + 3 2.69e-04 tg gtgctgca CATCAGCCAT chr16:34171771-34171792 + 3 2.69e-04 tc gtgctgca CATCAGCCAT chr16:33427728-33427750 + 4 2.69e-04 gtg gtgctgca CATCAGCCAT chr15:15524010-15524029 + 12 2.69e-04 ACCTttcttt gtgatgcg t chr14:9604493-9604514 + 14 2.69e-04 ACCTttcttt gtgatgcg t chr16:34580818-34580870 + 14 2.79e-04 CGGATTTTTG CTGCTGCG GCTTTTTGCT chr2:90319351-90319408 - 42 2.79e-04 GGATTTTTG CTGCTGCG GCTTTTTGTC chr12:37369859-37369878 - 9 3.07e-04 GACT GGGCTGCA GATTCTAC chr2:91849986-91850005 - 1 3.07e-04 TGATTATTCA GGGCTGCA chr2:90148161-90148180 - 1 3.07e-04 TGATTATTCA GGGCTGCA chr2:89593169-89593188 + 13 3.07e-04 tgattattca gggctgca chr20:31356021-31356040 - 9 3.58e-04 CCTT GTGATGTG TGGATTCA chrX:151372857-151372876 - 4 4.05e-04 CTATCTCCA GTGATGGG AGG chr15:17209805-17209824 + 4 4.59e-04 caa gggatgtg aaggacctc chr14:4756804-4756823 - 4 4.59e-04 CATTCCACC CGGGTGTA GCC chr8:86389943-86389965 + 4 4.59e-04 cct gtggtgcc ccGGTCCCCC chr22:11584757-11584776 + 1 4.97e-04 . gggctgga cCCCGCGGTA chr19:40017568-40017587 - 7 4.97e-04 TGCCCG GGGATGGG TCCCTG chr19:40015042-40015061 - 7 4.97e-04 TGCCCG GGGATGGG TCCCTG chr14:8807668-8807687 + 1 4.97e-04 . gggctgga cCCCGCGGTA chr20:31506810-31506829 + 12 5.12e-04 ACACCCACCA GGGGTgcc a chr14:6617332-6617351 - 7 5.12e-04 CCACCG GGGGTGCC AATTAG chr16:34619773-34619792 + 13 5.48e-04 ttatccagcc gtggtggc chr22:18979679-18979698 - 8 5.81e-04 AGCAT CTGCTGCA CAGGCCT chr22:6189685-6189704 + 5 6.37e-04 ccag gtgatgta acatgata chr20:29639527-29639546 + 11 6.37e-04 tttgatgatg gtgatgta aa chr3:95863992-95864011 + 5 7.73e-04 GAAA CTGGTGcc aaatatcc chr16:32929932-32929951 - 12 8.19e-04 A GTGGTGAG AAAGCGAATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:6593427-6593446 9.4e-06 5_[+12]_7 chr21:7764799-7764818 9.4e-06 8_[-12]_4 chr16:35061051-35061083 9.4e-06 14_[-12]_11 chr15:5927024-5927043 9.4e-06 7_[+12]_5 chr14:3520144-3520163 9.4e-06 7_[+12]_5 chr13:10654977-10654996 9.4e-06 7_[+12]_5 chr21:211015-211034 2.9e-05 5_[-12]_7 chr21:187876-187895 2.9e-05 5_[-12]_7 chr21:180736-180755 2.9e-05 5_[-12]_7 chr21:173596-173615 2.9e-05 5_[-12]_7 chr21:166160-166179 2.9e-05 5_[-12]_7 chr21:158864-158883 2.9e-05 5_[-12]_7 chr21:151428-151447 2.9e-05 5_[-12]_7 chr21:144132-144151 2.9e-05 5_[-12]_7 chr21:136842-136861 2.9e-05 3_[-12]_9 chr21:129407-129426 2.9e-05 5_[-12]_7 chr21:121976-121995 2.9e-05 3_[-12]_9 chr21:114538-114557 2.9e-05 5_[-12]_7 chr21:107102-107121 2.9e-05 5_[-12]_7 chr15:15500617-15500636 2.9e-05 5_[-12]_7 chr21:2358109-2358128 3.8e-05 7_[+12]_5 chr2:98024063-98024082 4.8e-05 10_[+12]_2 chr21:229845-229864 6.7e-05 11_[+12]_1 chr2:94946986-94947005 6.7e-05 3_[+12]_9 chr2:94749424-94749443 6.7e-05 9_[-12]_3 chr2:92029537-92029556 6.7e-05 12_[+12] chr1:12663105-12663124 6.7e-05 [-12]_12 chr15:15575424-15575455 9.5e-05 18_[-12]_6 chr7:76637704-76637723 9.5e-05 9_[+12]_3 chr7:76609719-76609738 9.5e-05 9_[+12]_3 chr22:3956206-3956225 0.00013 8_[+12]_4 chr22:3943006-3943025 0.00013 8_[+12]_4 chr17:19089004-19089053 0.00013 22_[+12]_20 chr14:13144249-13144272 0.00013 9_[-12]_7 chr8:12375484-12375504 0.00013 5_[+12]_8 chr8:11704907-11704926 0.00013 5_[+12]_7 chr8:7343990-7344009 0.00013 8_[-12]_4 chr2:92184441-92184490 0.00013 16_[+12]_26 chr2:90302942-90302969 0.00013 15_[+12]_5 chr22:9748569-9748612 0.00016 18_[+12]_18 chr22:6609758-6609777 0.00016 [+12]_12 chr16:80328126-80328145 0.00016 9_[-12]_3 chr15:21319103-21319122 0.00016 6_[+12]_6 chr15:5927263-5927282 0.00016 1_[-12]_11 chr14:3520383-3520402 0.00016 1_[-12]_11 chr13:10655216-10655235 0.00016 1_[-12]_11 chr2:96380195-96380214 0.00016 1_[-12]_11 chr22:9383602-9383621 0.00019 1_[-12]_11 chr22:9174347-9174366 0.00019 8_[+12]_4 chr22:6200154-6200173 0.00019 1_[-12]_11 chr21:6401041-6401060 0.00019 3_[-12]_9 chr20:31464262-31464282 0.00019 7_[+12]_6 chr18:47209329-47209348 0.00019 [+12]_12 chr18:47203414-47203433 0.00019 [+12]_12 chr18:47197499-47197518 0.00019 [+12]_12 chr22:16984686-16984705 0.00022 10_[+12]_2 chr22:6599067-6599086 0.00022 1_[-12]_11 chr22:6451818-6451837 0.00022 10_[+12]_2 chr21:8779911-8779930 0.00022 2_[-12]_10 chr21:7759147-7759166 0.00022 11_[+12]_1 chr16:34185873-34185899 0.00022 8_[+12]_11 chr16:33441838-33441858 0.00022 10_[+12]_3 chr15:5932735-5932754 0.00022 1_[-12]_11 chr15:5603917-5603936 0.00022 [-12]_12 chr14:3525789-3525808 0.00022 1_[-12]_11 chr13:11690466-11690485 0.00022 2_[-12]_10 chr13:10660691-10660710 0.00022 1_[-12]_11 chr7:58335062-58335081 0.00022 8_[+12]_4 chr2:96386430-96386449 0.00022 1_[-12]_11 chr1:128807220-128807239 0.00022 10_[+12]_2 chr1:126884029-126884048 0.00022 10_[+12]_2 chr16:34725217-34725236 0.00023 11_[-12]_1 chr13:5338388-5338417 0.00023 16_[+12]_6 chr22:12326831-12326852 0.00027 11_[+12]_3 chr20:31492575-31492607 0.00027 3_[-12]_22 chr16:35576994-35577015 0.00027 2_[+12]_12 chr16:34171771-34171792 0.00027 2_[+12]_12 chr16:33427728-33427750 0.00027 3_[+12]_12 chr15:15524010-15524029 0.00027 11_[+12]_1 chr14:9604493-9604514 0.00027 13_[+12]_1 chr16:34580818-34580870 0.00028 13_[+12]_32 chr2:90319351-90319408 0.00028 41_[-12]_9 chr12:37369859-37369878 0.00031 8_[-12]_4 chr2:91849986-91850005 0.00031 [-12]_12 chr2:90148161-90148180 0.00031 [-12]_12 chr2:89593169-89593188 0.00031 12_[+12] chr20:31356021-31356040 0.00036 8_[-12]_4 chrX:151372857-151372876 0.00041 3_[-12]_9 chr15:17209805-17209824 0.00046 3_[+12]_9 chr14:4756804-4756823 0.00046 3_[-12]_9 chr8:86389943-86389965 0.00046 3_[+12]_12 chr22:11584757-11584776 0.0005 [+12]_12 chr19:40017568-40017587 0.0005 6_[-12]_6 chr19:40015042-40015061 0.0005 6_[-12]_6 chr14:8807668-8807687 0.0005 [+12]_12 chr20:31506810-31506829 0.00051 11_[+12]_1 chr14:6617332-6617351 0.00051 6_[-12]_6 chr16:34619773-34619792 0.00055 12_[+12] chr22:18979679-18979698 0.00058 7_[-12]_5 chr22:6189685-6189704 0.00064 4_[+12]_8 chr20:29639527-29639546 0.00064 10_[+12]_2 chr3:95863992-95864011 0.00077 4_[+12]_8 chr16:32929932-32929951 0.00082 11_[-12]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GKGGTGBR width=8 seqs=103 chr22:6593427-6593446 ( 6) GTGGTGCG 1 chr21:7764799-7764818 ( 9) GTGGTGCG 1 chr16:35061051-35061083 ( 15) GTGGTGCG 1 chr15:5927024-5927043 ( 8) GTGGTGCG 1 chr14:3520144-3520163 ( 8) GTGGTGCG 1 chr13:10654977-10654996 ( 8) GTGGTGCG 1 chr21:211015-211034 ( 6) GTGGTGTG 1 chr21:187876-187895 ( 6) GTGGTGTG 1 chr21:180736-180755 ( 6) GTGGTGTG 1 chr21:173596-173615 ( 6) GTGGTGTG 1 chr21:166160-166179 ( 6) GTGGTGTG 1 chr21:158864-158883 ( 6) GTGGTGTG 1 chr21:151428-151447 ( 6) GTGGTGTG 1 chr21:144132-144151 ( 6) GTGGTGTG 1 chr21:136842-136861 ( 4) GTGGTGTG 1 chr21:129407-129426 ( 6) GTGGTGTG 1 chr21:121976-121995 ( 4) GTGGTGTG 1 chr21:114538-114557 ( 6) GTGGTGTG 1 chr21:107102-107121 ( 6) GTGGTGTG 1 chr15:15500617-15500636 ( 6) GTGGTGTG 1 chr21:2358109-2358128 ( 8) GTGGTGGG 1 chr2:98024063-98024082 ( 11) GGGGTGTG 1 chr21:229845-229864 ( 12) GTGGTGCA 1 chr2:94946986-94947005 ( 4) GTGGTGCA 1 chr2:94749424-94749443 ( 10) GTGGTGCA 1 chr2:92029537-92029556 ( 13) GTGGTGCA 1 chr1:12663105-12663124 ( 1) GTGGTGCA 1 chr15:15575424-15575455 ( 19) GGGGTGCA 1 chr7:76637704-76637723 ( 10) GGGGTGCA 1 chr7:76609719-76609738 ( 10) GGGGTGCA 1 chr22:3956206-3956225 ( 9) GTGGTGTA 1 chr22:3943006-3943025 ( 9) GTGGTGTA 1 chr17:19089004-19089053 ( 23) CGGGTGCG 1 chr14:13144249-13144272 ( 10) CGGGTGCG 1 chr8:12375484-12375504 ( 6) GGGCTGCG 1 chr8:11704907-11704926 ( 6) GGGCTGCG 1 chr8:7343990-7344009 ( 9) GGGCTGCG 1 chr2:92184441-92184490 ( 17) CGGGTGCG 1 chr2:90302942-90302969 ( 16) CGGGTGCG 1 chr22:9748569-9748612 ( 19) CTGGTGTG 1 chr22:6609758-6609777 ( 1) CTGGTGTG 1 chr16:80328126-80328145 ( 10) GTGGTGGA 1 chr15:21319103-21319122 ( 7) CTGGTGTG 1 chr15:5927263-5927282 ( 2) CTGGTGTG 1 chr14:3520383-3520402 ( 2) CTGGTGTG 1 chr13:10655216-10655235 ( 2) CTGGTGTG 1 chr2:96380195-96380214 ( 2) CTGGTGTG 1 chr22:9383602-9383621 ( 2) GTGCTGGG 1 chr22:9174347-9174366 ( 9) GTGCTGGG 1 chr22:6200154-6200173 ( 2) GTGCTGGG 1 chr21:6401041-6401060 ( 4) GTGCTGGG 1 chr20:31464262-31464282 ( 8) GTGCTGGG 1 chr18:47209329-47209348 ( 1) CTGGTGGG 1 chr18:47203414-47203433 ( 1) CTGGTGGG 1 chr18:47197499-47197518 ( 1) CTGGTGGG 1 chr22:16984686-16984705 ( 11) GGGGTGGA 1 chr22:6599067-6599086 ( 2) CGGGTGTG 1 chr22:6451818-6451837 ( 11) GGGGTGGA 1 chr21:8779911-8779930 ( 3) GGGGTGGA 1 chr21:7759147-7759166 ( 12) CGGGTGTG 1 chr16:34185873-34185899 ( 9) GGGGTGGA 1 chr16:33441838-33441858 ( 11) GGGGTGGA 1 chr15:5932735-5932754 ( 2) CGGGTGTG 1 chr15:5603917-5603936 ( 1) GGGCTGTG 1 chr14:3525789-3525808 ( 2) CGGGTGTG 1 chr13:11690466-11690485 ( 3) GGGGTGGA 1 chr13:10660691-10660710 ( 2) CGGGTGTG 1 chr7:58335062-58335081 ( 9) GGGGTGGA 1 chr2:96386430-96386449 ( 2) CGGGTGTG 1 chr1:128807220-128807239 ( 11) GGGGTGGA 1 chr1:126884029-126884048 ( 11) GGGGTGGA 1 chr16:34725217-34725236 ( 12) GGGCTGGG 1 chr13:5338388-5338417 ( 17) GGGCTGGG 1 chr22:12326831-12326852 ( 12) GTGATGCG 1 chr20:31492575-31492607 ( 4) GTGATGCG 1 chr16:35576994-35577015 ( 3) GTGCTGCA 1 chr16:34171771-34171792 ( 3) GTGCTGCA 1 chr16:33427728-33427750 ( 4) GTGCTGCA 1 chr15:15524010-15524029 ( 12) GTGATGCG 1 chr14:9604493-9604514 ( 14) GTGATGCG 1 chr16:34580818-34580870 ( 14) CTGCTGCG 1 chr2:90319351-90319408 ( 42) CTGCTGCG 1 chr12:37369859-37369878 ( 9) GGGCTGCA 1 chr2:91849986-91850005 ( 1) GGGCTGCA 1 chr2:90148161-90148180 ( 1) GGGCTGCA 1 chr2:89593169-89593188 ( 13) GGGCTGCA 1 chr20:31356021-31356040 ( 9) GTGATGTG 1 chrX:151372857-151372876 ( 4) GTGATGGG 1 chr15:17209805-17209824 ( 4) GGGATGTG 1 chr14:4756804-4756823 ( 4) CGGGTGTA 1 chr8:86389943-86389965 ( 4) GTGGTGCC 1 chr22:11584757-11584776 ( 1) GGGCTGGA 1 chr19:40017568-40017587 ( 7) GGGATGGG 1 chr19:40015042-40015061 ( 7) GGGATGGG 1 chr14:8807668-8807687 ( 1) GGGCTGGA 1 chr20:31506810-31506829 ( 12) GGGGTGCC 1 chr14:6617332-6617351 ( 7) GGGGTGCC 1 chr16:34619773-34619792 ( 13) GTGGTGGC 1 chr22:18979679-18979698 ( 8) CTGCTGCA 1 chr22:6189685-6189704 ( 5) GTGATGTA 1 chr20:29639527-29639546 ( 11) GTGATGTA 1 chr3:95863992-95864011 ( 5) CTGGTGCC 1 chr16:32929932-32929951 ( 12) GTGGTGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 36489 bayes= 9.48073 E= 3.0e+031 -1333 12 177 -1333 -1333 -1333 84 112 -1333 -1333 217 -1333 -138 0 159 -1333 -1333 -1333 -1333 185 -1333 -1333 217 -1333 -483 77 23 33 21 -220 150 -1333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 103 E= 3.0e+031 0.000000 0.242718 0.757282 0.000000 0.000000 0.000000 0.398058 0.601942 0.000000 0.000000 1.000000 0.000000 0.106796 0.223301 0.669903 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.009709 0.378641 0.262136 0.349515 0.320388 0.048544 0.631068 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKGGTGBR MEME-12 regular expression -------------------------------------------------------------------------------- [GC][TG]G[GC]TG[CTG][GA] -------------------------------------------------------------------------------- Time 192.35 secs. ******************************************************************************** ******************************************************************************** MOTIF TKGARSCWGKK MEME-13 width = 11 sites = 93 llr = 655 E-value = 1.1e+040 ******************************************************************************** -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 Description -------------------------------------------------------------------------------- Simplified A :1384116:21 pos.-specific C 1::::38:::: probability G 147145::a55 matrix T 85:111:4:44 bits 2.2 * 1.9 * 1.7 * 1.5 * Relative 1.3 * * * Entropy 1.1 ** * * (10.2 bits) 0.9 * ** *** 0.6 ***** *** * 0.4 *********** 0.2 *********** 0.0 ----------- Multilevel TTGAGGCAGGG consensus GA AC T TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------- chr21:10715059-10715078 - 6 2.36e-06 TCCA TTGAACCAGGG AGTCA chr21:9292543-9292562 + 5 2.36e-06 ttca ttgaaccaggg agtca chr14:7915482-7915501 - 6 2.36e-06 TTCA TTGAACCAGGG AGTCA chr13:13637141-13637160 - 6 2.36e-06 TCCA TTGAACCAGGG AGTCA chr13:12166718-12166737 + 5 2.36e-06 ttca ttgaaccaggg agtca chr19:50947445-50947464 - 1 4.84e-06 GAGAATCGC TTGAACCTGGG chr19:50936665-50936684 - 1 4.84e-06 GAGAATCGC TTGAACCTGGG chr22:12194336-12194355 + 5 8.50e-06 tcca ttgaaccaggt agtca chr14:9641605-9641624 + 6 8.50e-06 ttatt ttgagcctgtg tgta chr14:9471839-9471858 + 5 8.50e-06 tcca ttgaaccaggt agtca chr21:161610-161629 + 1 1.19e-05 . tggaagcagtt ccttgcacc chr21:132297-132316 + 1 1.19e-05 . tggaagcagtt ccttgcacc chr21:117428-117447 + 1 1.19e-05 . tggaagcagtt ccttgcacc chr21:102556-102575 + 1 1.19e-05 . tggaagcagtt ccttgcacc chr8:86079094-86079114 + 3 1.64e-05 aa ttgaggcagga gttgaaga chr9:48363274-48363293 + 2 3.19e-05 c ctgaggctggg atgctgtg chr9:48359408-48359427 + 2 3.19e-05 c ctgaggctggg atcccgtg chr22:7687726-7687745 + 9 5.07e-05 ttgggaag ctgaggcaggt g chr15:15020034-15020053 + 5 5.07e-05 tcca ctgaaccaggg agtca chr21:382554-382573 + 5 5.80e-05 ttag ttgatgcagtt ttttc chr14:1517570-1517589 - 6 5.80e-05 TTAG TTGATGCAGTT TTTTC chr14:677114-677133 + 5 5.80e-05 ttag ttgatgcagtt ttttc chr7:59854712-59854731 + 9 5.80e-05 cacacttc ttgaggctgta a chr7:59197899-59197918 + 9 5.80e-05 cacacttc ttgaggctgta a chr7:58345411-58345430 + 9 5.80e-05 cacacttc ttgaggctgta a chr5:17456713-17456732 - 2 7.55e-05 ATTTATTT TTGAGACAGAG T chr13:14261270-14261313 - 30 9.68e-05 TACT TTGGAGCTGGG TAACTGGCAG chr21:8193039-8193058 - 6 1.36e-04 TTAG TTGATGCAGAT TTTTC chr21:6503313-6503332 + 5 1.36e-04 ttag ttgatgcagat ttttc chr14:5716310-5716329 - 6 1.36e-04 TTAG TTGATGCAGAT TTTTC chr14:3061055-3061074 + 5 1.36e-04 ttag ttgatgcagat ttttc chr5:17456427-17456446 + 8 1.36e-04 ATAAAAT TGAAGTctggg ag chr15:20967815-20967834 + 2 1.52e-04 g tgaaacctgtt tttttgtt chr22:4024308-4024327 + 7 1.71e-04 tccagc tgaaatctggg gtt chr22:4011106-4011125 + 7 1.71e-04 tccagc tgaaatctggg gtt chr22:3951701-3951720 + 7 1.71e-04 tccagc tgaaatctggg gtt chr21:7270455-7270504 + 32 1.71e-04 tgactccctc tgaaatctggg cgtggtgg chr15:5292598-5292638 + 15 1.71e-04 CGGCGGGTTT CGGAGCCAGTT AGGTGGagct chr14:4093564-4093602 - 9 1.71e-04 TGACTCCCTC TGAAATCTGGG CGTGGTGG chr14:1664711-1664730 + 10 1.71e-04 gacccccgc tgaaatctggg chr13:10020799-10020839 + 15 1.71e-04 CGGCGGGTTT CGGAGCCAGTT AGGTGGagct chr18:47220856-47220875 - 7 1.90e-04 GTC TTGATGCTGAT GGAGCC chr18:47214941-47214960 - 7 1.90e-04 GTC TTGATGCTGAT GGAGCC chr18:47209024-47209043 - 7 1.90e-04 GTC TTGATGCTGAT GGAGCC chr16:80295253-80295272 - 1 1.90e-04 GGAGGAAGT GGGATCCAGGG chr15:20677604-20677623 + 3 1.90e-04 gg tagagacaggg tttctcc chr9:80359185-80359204 + 3 1.90e-04 Tg tagagacaggg tttcacc chr9:80177145-80177164 - 8 1.90e-04 TG TAGAGACAGGG TTTCACC chr15:19926305-19926324 + 7 2.12e-04 atcata tggagggaggt cca chr2:96373915-96373951 - 15 2.36e-04 GAAAGTTGAA GTGAGCCAGGA TCACGCATGT chr15:20828684-20828703 + 10 2.61e-04 tgcctcctc tggagaatggg chr8:12347039-12347058 - 3 2.61e-04 TTTTTTT TTAAGACAGAG TC chr16:34746090-34746110 + 4 2.90e-04 caa cggaaccTGtt tcttttc chr14:6660164-6660183 + 2 2.90e-04 t ttaaaccagta ccatgctg chr14:5881749-5881768 - 9 2.90e-04 T TTAAACCAGTA CGTTGGTG chr14:4077582-4077601 - 9 2.90e-04 T TTAAACCAGTA CGTTGGTG chr14:2935081-2935100 + 2 2.90e-04 t ttaaaccagta cgttggtg chr14:1658480-1658499 - 9 2.90e-04 T TTAAACCAGTA CGTTGGTG chr9:47762810-47762829 + 8 2.90e-04 tctgttt ttatggctgtg ta chr9:42036409-42036428 - 3 2.90e-04 TCTGTTT TTATGGCTGTG TA chr9:40785469-40785488 + 8 2.90e-04 tctgttt ttatggctgtg ta chr20:31179305-31179328 - 6 3.20e-04 CTGTGGCG TGGGGGCTGAG GTCCA chr20:30460118-30460141 - 6 3.20e-04 CTGTGGCG TGGGGGCTGAG GTCCA chr22:9824370-9824390 + 6 3.50e-04 tcttc tggtgacaggt gTACC chr22:3871175-3871194 + 7 3.50e-04 ggttgg tgatacctggg tgc chr22:3864859-3864878 + 7 3.50e-04 ggttgg tgatacctggg tgc chr21:7074763-7074782 - 5 3.86e-04 TGTAT TTGTGCCAGAT TTTC chr20:30521609-30521628 - 4 3.86e-04 TTCTCA TTGTGGATGGG GTA chr20:25981479-25981498 + 7 3.86e-04 ttctca ttgtggatggg gtt chr15:21549500-21549519 + 4 3.86e-04 aat ttaaaactgtt tttgta chr15:21447923-21447942 - 7 3.86e-04 AAT TTAAAACTGTT TTTGTA chr9:79714439-79714458 + 3 3.86e-04 ga gGGAGGAAGTG ATTTAAT chr9:77850049-77850068 - 8 3.86e-04 GA GGGAGGAAGTG ATTTAAT chr9:40310715-40310734 + 3 3.86e-04 ga gGGAGGAAGTG ATTTAAT chr14:4656848-4656867 + 4 4.60e-04 tag ttgatgaagtt ttttca chr16:34943222-34943241 - 9 5.04e-04 A CTGTAGCAGGT ATTAGTTC chr1:108479873-108479892 + 7 5.04e-04 cttgaG TGAAagaagtt taa chr1:108281662-108281681 - 4 5.04e-04 CTTGAG TGAAAGAAGTT TAA chr20:30945511-30945530 + 8 5.49e-04 cggatca cGAagtcaggg tt chr15:15374066-15374085 + 10 5.49e-04 agacagaca gggagggaggg chr11:50290419-50290438 - 8 5.96e-04 AG TTAAAACTGGA GTTTCAC chr8:86894327-86894346 + 10 6.47e-04 gtacttctg tgggatcagtg chr8:86312752-86312771 + 10 6.47e-04 gtacttctg tgggatcagtg chr16:33727471-33727490 + 7 7.61e-04 atcata tggagagaggt cca chr19:53227777-53227796 - 5 8.22e-04 CGAGA GGGAGAAAGGG AAGA chr13:10180811-10180830 + 10 8.22e-04 tttctctct ttaaagaagat chr21:7360404-7360423 - 8 8.87e-04 AT GTGAGCAAGAG TGCCTGG chr14:6737612-6737631 - 9 8.87e-04 G CGGAAGGTGGG CACCTGAG chr8:12327555-12327574 - 9 8.87e-04 T GAGAGGCTGAG CGGGGTGG chr8:11656960-11656979 - 9 8.87e-04 T GAGAGGCTGAG CGGGGTGG chr16:80263890-80263909 + 10 9.58e-04 aattgtgaa gtgaggccggg chr7:144998762-144998781 + 1 9.58e-04 . tagagcatggt atcctggaa chr1:16214536-16214555 - 3 1.11e-03 ACTAGGA TGGAGCTAGGT GC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:10715059-10715078 2.4e-06 5_[-13]_4 chr21:9292543-9292562 2.4e-06 4_[+13]_5 chr14:7915482-7915501 2.4e-06 5_[-13]_4 chr13:13637141-13637160 2.4e-06 5_[-13]_4 chr13:12166718-12166737 2.4e-06 4_[+13]_5 chr19:50947445-50947464 4.8e-06 [-13]_9 chr19:50936665-50936684 4.8e-06 [-13]_9 chr22:12194336-12194355 8.5e-06 4_[+13]_5 chr14:9641605-9641624 8.5e-06 5_[+13]_4 chr14:9471839-9471858 8.5e-06 4_[+13]_5 chr21:161610-161629 1.2e-05 [+13]_9 chr21:132297-132316 1.2e-05 [+13]_9 chr21:117428-117447 1.2e-05 [+13]_9 chr21:102556-102575 1.2e-05 [+13]_9 chr8:86079094-86079114 1.6e-05 2_[+13]_8 chr9:48363274-48363293 3.2e-05 1_[+13]_8 chr9:48359408-48359427 3.2e-05 1_[+13]_8 chr22:7687726-7687745 5.1e-05 8_[+13]_1 chr15:15020034-15020053 5.1e-05 4_[+13]_5 chr21:382554-382573 5.8e-05 4_[+13]_5 chr14:1517570-1517589 5.8e-05 5_[-13]_4 chr14:677114-677133 5.8e-05 4_[+13]_5 chr7:59854712-59854731 5.8e-05 8_[+13]_1 chr7:59197899-59197918 5.8e-05 8_[+13]_1 chr7:58345411-58345430 5.8e-05 8_[+13]_1 chr5:17456713-17456732 7.5e-05 1_[-13]_8 chr13:14261270-14261313 9.7e-05 29_[-13]_4 chr21:8193039-8193058 0.00014 5_[-13]_4 chr21:6503313-6503332 0.00014 4_[+13]_5 chr14:5716310-5716329 0.00014 5_[-13]_4 chr14:3061055-3061074 0.00014 4_[+13]_5 chr5:17456427-17456446 0.00014 7_[+13]_2 chr15:20967815-20967834 0.00015 1_[+13]_8 chr22:4024308-4024327 0.00017 6_[+13]_3 chr22:4011106-4011125 0.00017 6_[+13]_3 chr22:3951701-3951720 0.00017 6_[+13]_3 chr21:7270455-7270504 0.00017 31_[+13]_8 chr15:5292598-5292638 0.00017 14_[+13]_16 chr14:4093564-4093602 0.00017 8_[-13]_20 chr14:1664711-1664730 0.00017 9_[+13] chr13:10020799-10020839 0.00017 14_[+13]_16 chr18:47220856-47220875 0.00019 6_[-13]_3 chr18:47214941-47214960 0.00019 6_[-13]_3 chr18:47209024-47209043 0.00019 6_[-13]_3 chr16:80295253-80295272 0.00019 [-13]_9 chr15:20677604-20677623 0.00019 2_[+13]_7 chr9:80359185-80359204 0.00019 2_[+13]_7 chr9:80177145-80177164 0.00019 7_[-13]_2 chr15:19926305-19926324 0.00021 6_[+13]_3 chr2:96373915-96373951 0.00024 14_[-13]_12 chr15:20828684-20828703 0.00026 9_[+13] chr8:12347039-12347058 0.00026 2_[-13]_7 chr16:34746090-34746110 0.00029 3_[+13]_7 chr14:6660164-6660183 0.00029 1_[+13]_8 chr14:5881749-5881768 0.00029 8_[-13]_1 chr14:4077582-4077601 0.00029 8_[-13]_1 chr14:2935081-2935100 0.00029 1_[+13]_8 chr14:1658480-1658499 0.00029 8_[-13]_1 chr9:47762810-47762829 0.00029 7_[+13]_2 chr9:42036409-42036428 0.00029 2_[-13]_7 chr9:40785469-40785488 0.00029 7_[+13]_2 chr20:31179305-31179328 0.00032 5_[-13]_8 chr20:30460118-30460141 0.00032 5_[-13]_8 chr22:9824370-9824390 0.00035 5_[+13]_5 chr22:3871175-3871194 0.00035 6_[+13]_3 chr22:3864859-3864878 0.00035 6_[+13]_3 chr21:7074763-7074782 0.00039 4_[-13]_5 chr20:30521609-30521628 0.00039 3_[-13]_6 chr20:25981479-25981498 0.00039 6_[+13]_3 chr15:21549500-21549519 0.00039 3_[+13]_6 chr15:21447923-21447942 0.00039 6_[-13]_3 chr9:79714439-79714458 0.00039 2_[+13]_7 chr9:77850049-77850068 0.00039 7_[-13]_2 chr9:40310715-40310734 0.00039 2_[+13]_7 chr14:4656848-4656867 0.00046 3_[+13]_6 chr16:34943222-34943241 0.0005 8_[-13]_1 chr1:108479873-108479892 0.0005 6_[+13]_3 chr1:108281662-108281681 0.0005 3_[-13]_6 chr20:30945511-30945530 0.00055 7_[+13]_2 chr15:15374066-15374085 0.00055 9_[+13] chr11:50290419-50290438 0.0006 7_[-13]_2 chr8:86894327-86894346 0.00065 9_[+13] chr8:86312752-86312771 0.00065 9_[+13] chr16:33727471-33727490 0.00076 6_[+13]_3 chr19:53227777-53227796 0.00082 4_[-13]_5 chr13:10180811-10180830 0.00082 9_[+13] chr21:7360404-7360423 0.00089 7_[-13]_2 chr14:6737612-6737631 0.00089 8_[-13]_1 chr8:12327555-12327574 0.00089 8_[-13]_1 chr8:11656960-11656979 0.00089 8_[-13]_1 chr16:80263890-80263909 0.00096 9_[+13] chr7:144998762-144998781 0.00096 [+13]_9 chr1:16214536-16214555 0.0011 2_[-13]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TKGARSCWGKK width=11 seqs=93 chr21:10715059-10715078 ( 6) TTGAACCAGGG 1 chr21:9292543-9292562 ( 5) TTGAACCAGGG 1 chr14:7915482-7915501 ( 6) TTGAACCAGGG 1 chr13:13637141-13637160 ( 6) TTGAACCAGGG 1 chr13:12166718-12166737 ( 5) TTGAACCAGGG 1 chr19:50947445-50947464 ( 1) TTGAACCTGGG 1 chr19:50936665-50936684 ( 1) TTGAACCTGGG 1 chr22:12194336-12194355 ( 5) TTGAACCAGGT 1 chr14:9641605-9641624 ( 6) TTGAGCCTGTG 1 chr14:9471839-9471858 ( 5) TTGAACCAGGT 1 chr21:161610-161629 ( 1) TGGAAGCAGTT 1 chr21:132297-132316 ( 1) TGGAAGCAGTT 1 chr21:117428-117447 ( 1) TGGAAGCAGTT 1 chr21:102556-102575 ( 1) TGGAAGCAGTT 1 chr8:86079094-86079114 ( 3) TTGAGGCAGGA 1 chr9:48363274-48363293 ( 2) CTGAGGCTGGG 1 chr9:48359408-48359427 ( 2) CTGAGGCTGGG 1 chr22:7687726-7687745 ( 9) CTGAGGCAGGT 1 chr15:15020034-15020053 ( 5) CTGAACCAGGG 1 chr21:382554-382573 ( 5) TTGATGCAGTT 1 chr14:1517570-1517589 ( 6) TTGATGCAGTT 1 chr14:677114-677133 ( 5) TTGATGCAGTT 1 chr7:59854712-59854731 ( 9) TTGAGGCTGTA 1 chr7:59197899-59197918 ( 9) TTGAGGCTGTA 1 chr7:58345411-58345430 ( 9) TTGAGGCTGTA 1 chr5:17456713-17456732 ( 2) TTGAGACAGAG 1 chr13:14261270-14261313 ( 30) TTGGAGCTGGG 1 chr21:8193039-8193058 ( 6) TTGATGCAGAT 1 chr21:6503313-6503332 ( 5) TTGATGCAGAT 1 chr14:5716310-5716329 ( 6) TTGATGCAGAT 1 chr14:3061055-3061074 ( 5) TTGATGCAGAT 1 chr5:17456427-17456446 ( 8) TGAAGTCTGGG 1 chr15:20967815-20967834 ( 2) TGAAACCTGTT 1 chr22:4024308-4024327 ( 7) TGAAATCTGGG 1 chr22:4011106-4011125 ( 7) TGAAATCTGGG 1 chr22:3951701-3951720 ( 7) TGAAATCTGGG 1 chr21:7270455-7270504 ( 32) TGAAATCTGGG 1 chr15:5292598-5292638 ( 15) CGGAGCCAGTT 1 chr14:4093564-4093602 ( 9) TGAAATCTGGG 1 chr14:1664711-1664730 ( 10) TGAAATCTGGG 1 chr13:10020799-10020839 ( 15) CGGAGCCAGTT 1 chr18:47220856-47220875 ( 7) TTGATGCTGAT 1 chr18:47214941-47214960 ( 7) TTGATGCTGAT 1 chr18:47209024-47209043 ( 7) TTGATGCTGAT 1 chr16:80295253-80295272 ( 1) GGGATCCAGGG 1 chr15:20677604-20677623 ( 3) TAGAGACAGGG 1 chr9:80359185-80359204 ( 3) TAGAGACAGGG 1 chr9:80177145-80177164 ( 8) TAGAGACAGGG 1 chr15:19926305-19926324 ( 7) TGGAGGGAGGT 1 chr2:96373915-96373951 ( 15) GTGAGCCAGGA 1 chr15:20828684-20828703 ( 10) TGGAGAATGGG 1 chr8:12347039-12347058 ( 3) TTAAGACAGAG 1 chr16:34746090-34746110 ( 4) CGGAACCTGTT 1 chr14:6660164-6660183 ( 2) TTAAACCAGTA 1 chr14:5881749-5881768 ( 9) TTAAACCAGTA 1 chr14:4077582-4077601 ( 9) TTAAACCAGTA 1 chr14:2935081-2935100 ( 2) TTAAACCAGTA 1 chr14:1658480-1658499 ( 9) TTAAACCAGTA 1 chr9:47762810-47762829 ( 8) TTATGGCTGTG 1 chr9:42036409-42036428 ( 3) TTATGGCTGTG 1 chr9:40785469-40785488 ( 8) TTATGGCTGTG 1 chr20:31179305-31179328 ( 6) TGGGGGCTGAG 1 chr20:30460118-30460141 ( 6) TGGGGGCTGAG 1 chr22:9824370-9824390 ( 6) TGGTGACAGGT 1 chr22:3871175-3871194 ( 7) TGATACCTGGG 1 chr22:3864859-3864878 ( 7) TGATACCTGGG 1 chr21:7074763-7074782 ( 5) TTGTGCCAGAT 1 chr20:30521609-30521628 ( 4) TTGTGGATGGG 1 chr20:25981479-25981498 ( 7) TTGTGGATGGG 1 chr15:21549500-21549519 ( 4) TTAAAACTGTT 1 chr15:21447923-21447942 ( 7) TTAAAACTGTT 1 chr9:79714439-79714458 ( 3) GGGAGGAAGTG 1 chr9:77850049-77850068 ( 8) GGGAGGAAGTG 1 chr9:40310715-40310734 ( 3) GGGAGGAAGTG 1 chr14:4656848-4656867 ( 4) TTGATGAAGTT 1 chr16:34943222-34943241 ( 9) CTGTAGCAGGT 1 chr1:108479873-108479892 ( 7) TGAAAGAAGTT 1 chr1:108281662-108281681 ( 4) TGAAAGAAGTT 1 chr20:30945511-30945530 ( 8) CGAAGTCAGGG 1 chr15:15374066-15374085 ( 10) GGGAGGGAGGG 1 chr11:50290419-50290438 ( 8) TTAAAACTGGA 1 chr8:86894327-86894346 ( 10) TGGGATCAGTG 1 chr8:86312752-86312771 ( 10) TGGGATCAGTG 1 chr16:33727471-33727490 ( 7) TGGAGAGAGGT 1 chr19:53227777-53227796 ( 5) GGGAGAAAGGG 1 chr13:10180811-10180830 ( 10) TTAAAGAAGAT 1 chr21:7360404-7360423 ( 8) GTGAGCAAGAG 1 chr14:6737612-6737631 ( 9) CGGAAGGTGGG 1 chr8:12327555-12327574 ( 9) GAGAGGCTGAG 1 chr8:11656960-11656979 ( 9) GAGAGGCTGAG 1 chr16:80263890-80263909 ( 10) GTGAGGCCGGG 1 chr7:144998762-144998781 ( 1) TAGAGCATGGT 1 chr1:16214536-16214555 ( 3) TGGAGCTAGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 11 n= 28704 bayes= 7.67056 E= 1.1e+040 -1318 -105 -91 148 -210 -1318 80 98 1 -1318 169 -1318 160 -1318 -205 -137 63 -1318 98 -110 -110 43 105 -137 -99 186 -237 -468 107 -437 -1318 56 -1318 -1318 217 -1318 -69 -1318 109 36 -123 -1318 121 40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 11 nsites= 93 E= 1.1e+040 0.000000 0.107527 0.118280 0.774194 0.064516 0.000000 0.387097 0.548387 0.279570 0.000000 0.720430 0.000000 0.838710 0.000000 0.053763 0.107527 0.430108 0.000000 0.440860 0.129032 0.129032 0.301075 0.462366 0.107527 0.139785 0.806452 0.043011 0.010753 0.580645 0.010753 0.000000 0.408602 0.000000 0.000000 1.000000 0.000000 0.172043 0.000000 0.473118 0.354839 0.118280 0.000000 0.516129 0.365591 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKGARSCWGKK MEME-13 regular expression -------------------------------------------------------------------------------- T[TG][GA]A[GA][GC]C[AT]G[GT][GT] -------------------------------------------------------------------------------- Time 201.01 secs. ******************************************************************************** ******************************************************************************** MOTIF TGCCCDGV MEME-14 width = 8 sites = 146 llr = 934 E-value = 2.9e+045 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 Description -------------------------------------------------------------------------------- Simplified A :1::25:3 pos.-specific C ::aa6:24 probability G 39:::383 matrix T 7:::22:1 bits 2.2 * 1.9 ** 1.7 ** 1.5 *** * Relative 1.3 *** * Entropy 1.1 *** * (9.2 bits) 0.9 **** * 0.6 ***** * 0.4 ***** * 0.2 ******** 0.0 -------- Multilevel TGCCCAGC consensus G TG A sequence T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------- chr16:34616068-34616087 - 11 9.44e-06 CG TGCCCAGC TGGTATTGAC chr12:37374280-37374299 + 11 9.44e-06 agcagtggac tgcccagc tt chrX:48712555-48712576 + 11 2.65e-05 ctcactatgt tgcccagg atgg chr4:193536538-193536557 - 2 2.65e-05 ATCCCCGGGA TGCCCAGG A chr4:193533242-193533261 - 2 2.65e-05 ATCCCCGGGA TGCCCAGG A chr4:193529945-193529964 - 2 2.65e-05 ATCCCCGGGA TGCCCAGG A chr4:193526649-193526668 - 2 2.65e-05 ATCCCCGGGA TGCCCAGG A chr4:193523352-193523371 - 2 2.65e-05 ATCCCCGGGA TGCCCAGG A chr4:193520056-193520075 - 2 2.65e-05 ATCCCCGGGA TGCCCAGG A chr2:94959113-94959133 - 12 2.65e-05 TG TGCCCGGC CAAGATTCTG chr2:94737293-94737313 + 3 2.65e-05 tg tgcccggc cAAGATTCTG chr1:143521505-143521524 + 3 2.65e-05 gt tgcccagg ttggtctcca chr21:10551407-10551468 - 31 6.28e-05 TGGTGCCACC TGCCCTGC TCTGCGCCTC chr19:38923808-38923827 + 11 6.28e-05 aagccaccgt tgcccggg ga chr19:38918750-38918769 + 11 6.28e-05 aagccaccgt tgcccggg ga chr19:38880786-38880805 + 11 6.28e-05 aagccaccgt tgcccggg ga chr19:38830164-38830183 + 11 6.28e-05 aagccaccgt tgcccggg ga chr15:17158384-17158416 - 2 6.28e-05 TGGTGCCACC TGCCCTGC T chr14:6658663-6658724 + 25 6.28e-05 TGGTGCcacc tgccctgc tctgcgcctc chr13:13473559-13473611 - 31 6.28e-05 TGGTGCCACC TGCCCTGC TCTGCGCCTC chr10:134699571-13469959 - 13 6.28e-05 . TGCCCGGG CTGCTCCCAC chr10:134696260-13469627 - 13 6.28e-05 . TGCCCGGG CTGCTCCCAC chr9:80192688-80192729 + 5 6.28e-05 cacc tgccctgc tctgcgcctc chr9:48147402-48147421 - 3 6.28e-05 AGCAGTGGCC TGCCCTGC TT chr9:47778182-47778224 + 5 6.28e-05 cacc tgccctgc tctgcgcctc chr9:42020851-42020897 - 16 6.28e-05 TGGTGCCACC TGCCCTGC TCTGCGCCCC chr7:102278037-102278056 + 6 6.28e-05 catct ggccCAGC ATCTGTA chr22:12356029-12356048 + 2 9.54e-05 g ggcccagg acaAGTCTCT chr15:15575424-15575455 + 2 9.54e-05 g ggcccagg acaAGTCTCT chr14:9623617-9623636 + 2 9.54e-05 g ggcccagg acaAGTCTCT chr10:134723020-13472303 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr10:134719710-13471972 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr10:134716400-13471641 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr4:193540215-193540234 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr4:193536909-193536928 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr4:193533613-193533632 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr4:193530316-193530335 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr4:193527020-193527039 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr4:193523723-193523742 + 10 9.54e-05 cagacccca ggcCCGGC GCA chr22:10370611-10370630 - 12 1.40e-04 G GGCCCAGA ACAAGTCTCT chr21:8782770-8782789 - 13 1.40e-04 . TGCCCTGA ATTTCCATCT chr20:31318503-31318522 - 10 1.40e-04 TTG TGCCCAGT GGACAGTGC chr13:11693326-11693345 - 13 1.40e-04 . TGCCCTGA ATTTCCATCT chr17:23343910-23343929 - 13 1.87e-04 . TGCCTGGC CTATTTAGAA chr16:28943332-28943351 + 6 1.87e-04 tctgt tgcctagg ctcgttt chr16:28733133-28733152 - 8 1.87e-04 TCTGT TGCCTAGG CTCGTTT chr16:21333537-21333556 - 8 1.87e-04 TATGT TGCCTAGG CTGGTTT chr8:12346762-12346781 - 11 1.87e-04 CG TGCCTGGC CAAACATAAA chr8:7372703-7372722 + 12 1.87e-04 tgagccaccg tgcctggc c chr20:30626966-30626985 - 10 2.04e-04 TTG TGCCCGGT GGACAGTGC chr20:26280161-26280180 - 12 2.04e-04 G TGCCCGGT GGACAGTGCA chr7:102219209-102219228 + 1 2.04e-04 . tgcccggt cCTAATTGTT chr22:24428451-24428470 - 2 2.47e-04 TACTGTGCAA TGCCAGGC A chr21:8154106-8154125 - 13 2.87e-04 . TGCCCACC TCAGCCTACC chr21:6542579-6542598 + 2 2.87e-04 c tgcccacc tcagcctacc chr21:6402160-6402179 + 2 2.87e-04 c tgcccacc ttggggtacc chr21:2157227-2157246 - 13 2.87e-04 . TGCCCACC TCAGCCTACC chr14:2931514-2931533 + 2 2.87e-04 c tgcccacc ttggggtacc chr13:10075326-10075345 + 2 2.87e-04 c tgcccacc ttggggtacc chr2:90711599-90711618 - 8 2.87e-04 ACATG TGCCTGGG AAAAACC chr19:50948389-50948408 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50943003-50943022 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50937609-50937628 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50926832-50926851 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50921445-50921464 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50916053-50916072 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50910662-50910681 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50905281-50905300 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50899905-50899924 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50894529-50894548 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50889172-50889191 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50883824-50883843 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50878465-50878484 + 12 3.32e-04 tacagtcgcc tgccaaga g chr19:50873112-50873131 + 12 3.32e-04 tacagtcgcc tgccaaga g chrX:48813082-48813101 + 10 3.74e-04 tgggctgaa tgccatgc act chrX:48794062-48794081 + 10 3.74e-04 tgggctgaa tgccatgc act chr21:330540-330559 - 2 3.74e-04 TGAGTGAGAG TGCCTGGA G chr1:103533116-103533135 + 1 3.74e-04 . tgcctgga agaaatttag chr22:4139273-4139292 + 4 4.20e-04 acc tgccttgg cctcccaaa chr21:229845-229864 + 2 4.20e-04 c tgcccgcc ttgtggtgca chr13:14254066-14254085 - 2 4.20e-04 AAATAATATT GGCCTGGC G chr2:92202558-92202620 - 17 4.20e-04 CGTGGCTTTT TGCCCGCC TCGGCTTTTT chr21:10788651-10788670 - 2 4.51e-04 TCAACAAGGA TACCCAGC A chr13:13711185-13711204 - 2 4.51e-04 TCAACAAGGA TACCCAGC A chr1:12639836-12639858 - 5 4.51e-04 TCAGATCTCG TACCCAGC TAAT chr19:50734320-50734362 - 10 5.40e-04 AAAAAAAAAA GGCCAGGC GCGGTGTCT chr18:217979-217998 - 11 5.40e-04 TG TGCCTAGT GTGTTAGGGT chr17:22542124-22542143 + 1 5.40e-04 . tgccatgg cattcacatt chr15:20747961-20747980 - 10 5.40e-04 GTT GGCCAGGC TGGTCTCGA chr15:1777300-1777319 + 12 5.40e-04 tgagtgaGAG TGCCTTGA G chr9:48143564-48143583 - 3 5.40e-04 ATCAGTGGCT TGCCCCGC TT chr9:41251386-41251405 + 3 5.40e-04 ga tgcctagt ttttggcctg chr9:48357646-48357665 + 9 5.82e-04 tttttcaa tgccctcc tcct chr22:10373074-10373093 - 4 6.53e-04 CTGTTGGAG TACCCGGC CGT chr22:5801180-5801201 - 12 6.53e-04 TCA GGCCCTGT GCTGAGCCCC chr15:5345994-5346013 - 12 6.53e-04 A GGCCCTGT GCTGAGCCCC chr14:2930382-2930403 - 12 6.53e-04 TCA GGCCCTGT GCTGAGCCCC chr14:226090-226121 + 25 6.53e-04 aaaacccatt ggccaaga chr13:10074193-10074212 - 12 6.53e-04 A GGCCCTGT GCTGAGCCCC chr2:92041756-92041776 - 7 6.53e-04 TGTTCCC GGCCAAGA TTCTGT chr1:108255411-108255430 + 5 7.08e-04 ggga ggcctgga caaaggga chr17:38963146-38963165 + 10 7.56e-04 cctccagca ggccttgg tca chr15:14907804-14907823 - 9 7.56e-04 AAAC TACCCAGA AGCATTCT chr21:8359960-8359979 + 1 9.23e-04 . ggcccaca gcgccggcgc chr19:38806555-38806574 + 8 9.23e-04 gtctgtg tgCCCACT TATGt chr15:1870889-1870908 + 10 9.23e-04 gcgcagaga ggcccaca gcg chr9:76973043-76973062 + 10 9.23e-04 gcgcagaga ggcccaca gcg chr9:48363899-48363918 + 3 9.23e-04 aa ggcctagt gtcagctgca chr9:48143629-48143648 - 11 9.23e-04 AA GGCCTAGT GTCAGCTGCA chr2:90633304-90633323 - 5 9.23e-04 AAGGAAGG GGCCATGG AACC chr1:12589529-12589548 + 7 9.23e-04 tcacct ggccTTGA ATGAAT chr1:12573587-12573606 - 7 9.23e-04 TCGTCT GGCCTTGA ATGAAT chr22:6593664-6593683 - 5 1.11e-03 ATCAACAA GGCCTGGT GTTG chr21:7764563-7764582 + 9 1.11e-03 ATCAACAA ggcctggt gttg chr21:2196331-2196350 - 11 1.11e-03 CG CGCCCGGC AATTTGGTAT chr15:15674933-15674952 + 6 1.11e-03 aattg cgcccggc cAGCTAC chr13:10686040-10686059 - 13 1.11e-03 . CGCCCAGG CTGGAGTGCA chr8:86770312-86770331 + 3 1.11e-03 ca ggccccgg tgtgtgatgt chr8:86575765-86575784 + 3 1.11e-03 ca ggccccgg tgtgtgatgt chrX:48769026-48769045 + 9 1.20e-03 tgggtata tacccagt aatg chrX:48740452-48740471 + 11 1.20e-03 tttgggtata tacccagt aa chrX:48730928-48730947 + 11 1.20e-03 tttgggtata tacccagt aa chr22:277573-277595 + 5 1.31e-03 agtc tgaccagc atagtgaaac chr17:22763086-22763105 + 12 1.31e-03 ACATTTTTct tgccttcc t chr14:261031-261050 + 2 1.31e-03 c tgaccagc atagtgaaac chr5:17459869-17459888 - 13 1.31e-03 . CGCCCAGA CTATGATAGT chr22:3740224-3740243 + 4 1.49e-03 acc tgcctcgg tctcccaaa chr20:25870797-25870816 - 9 1.61e-03 TCAT GACCCTGG AGCTCTTG chr20:25860824-25860843 - 9 1.61e-03 TCGT GACCCTGG AGCTCTTT chr9:79740139-79740158 - 7 1.61e-03 CCACAC TGACCAGG CCCTTC chr22:9876627-9876659 - 22 1.71e-03 CACC TGCCTCGA GGTGAAAAAA chr17:38906719-38906738 + 9 1.71e-03 AAAACAAA Tacccacc ctga chr17:37443069-37443088 - 5 1.71e-03 AAAACAAA TACCCACC CTGA chr16:80149371-80149390 + 7 1.71e-03 AAAAAT TACCTGGg gccagg chr22:4793747-4793766 - 4 1.88e-03 TTTTCATTT TGCCTTCA AGT chr21:3108289-3108308 - 4 1.88e-03 TTTTCATTT TGCCTTCA AGT chr16:34616380-34616399 - 9 1.88e-03 GTTC TGCCTACT GAATTTTT chr15:2506430-2506449 - 4 1.88e-03 TTTTCATTT TGCCTTCA AGT chr14:2100007-2100026 - 4 1.88e-03 TTTTCATTT TGCCTTCA AGT chr13:5770609-5770628 - 4 1.88e-03 TTTTCATTT TGCCTTCA AGT chr21:7068326-7068345 - 6 2.14e-03 GTTACAT GACCTAGG TGATC chr14:7792251-7792270 - 5 2.14e-03 GAAGGATG GACCTAGG GACA chr15:20677173-20677217 + 16 2.40e-03 aggtgtgtgg taccatgg ctggttaatt chr14:13560855-13560880 - 19 2.40e-03 . TACCATGG TGTTTTGGTT chr8:12339780-12339799 + 5 2.88e-03 gcga tgacaagc ccagtgtg chr21:7278191-7278210 - 7 3.64e-03 CGGGGG TGACAAGA CGTTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:34616068-34616087 9.4e-06 10_[-14]_2 chr12:37374280-37374299 9.4e-06 10_[+14]_2 chrX:48712555-48712576 2.6e-05 10_[+14]_4 chr4:193536538-193536557 2.6e-05 1_[-14]_11 chr4:193533242-193533261 2.6e-05 1_[-14]_11 chr4:193529945-193529964 2.6e-05 1_[-14]_11 chr4:193526649-193526668 2.6e-05 1_[-14]_11 chr4:193523352-193523371 2.6e-05 1_[-14]_11 chr4:193520056-193520075 2.6e-05 1_[-14]_11 chr2:94959113-94959133 2.6e-05 11_[-14]_2 chr2:94737293-94737313 2.6e-05 2_[+14]_11 chr1:143521505-143521524 2.6e-05 2_[+14]_10 chr21:10551407-10551468 6.3e-05 30_[-14]_24 chr19:38923808-38923827 6.3e-05 10_[+14]_2 chr19:38918750-38918769 6.3e-05 10_[+14]_2 chr19:38880786-38880805 6.3e-05 10_[+14]_2 chr19:38830164-38830183 6.3e-05 10_[+14]_2 chr15:17158384-17158416 6.3e-05 1_[-14]_24 chr14:6658663-6658724 6.3e-05 24_[+14]_30 chr13:13473559-13473611 6.3e-05 30_[-14]_15 chr10:134699571-13469959 6.3e-05 12_[-14] chr10:134696260-13469627 6.3e-05 12_[-14] chr9:80192688-80192729 6.3e-05 4_[+14]_30 chr9:48147402-48147421 6.3e-05 2_[-14]_10 chr9:47778182-47778224 6.3e-05 4_[+14]_31 chr9:42020851-42020897 6.3e-05 15_[-14]_24 chr7:102278037-102278056 6.3e-05 5_[+14]_7 chr22:12356029-12356048 9.5e-05 1_[+14]_11 chr15:15575424-15575455 9.5e-05 1_[+14]_23 chr14:9623617-9623636 9.5e-05 1_[+14]_11 chr10:134723020-13472303 9.5e-05 9_[+14]_3 chr10:134719710-13471972 9.5e-05 9_[+14]_3 chr10:134716400-13471641 9.5e-05 9_[+14]_3 chr4:193540215-193540234 9.5e-05 9_[+14]_3 chr4:193536909-193536928 9.5e-05 9_[+14]_3 chr4:193533613-193533632 9.5e-05 9_[+14]_3 chr4:193530316-193530335 9.5e-05 9_[+14]_3 chr4:193527020-193527039 9.5e-05 9_[+14]_3 chr4:193523723-193523742 9.5e-05 9_[+14]_3 chr22:10370611-10370630 0.00014 11_[-14]_1 chr21:8782770-8782789 0.00014 12_[-14] chr20:31318503-31318522 0.00014 9_[-14]_3 chr13:11693326-11693345 0.00014 12_[-14] chr17:23343910-23343929 0.00019 12_[-14] chr16:28943332-28943351 0.00019 5_[+14]_7 chr16:28733133-28733152 0.00019 7_[-14]_5 chr16:21333537-21333556 0.00019 7_[-14]_5 chr8:12346762-12346781 0.00019 10_[-14]_2 chr8:7372703-7372722 0.00019 11_[+14]_1 chr20:30626966-30626985 0.0002 9_[-14]_3 chr20:26280161-26280180 0.0002 11_[-14]_1 chr7:102219209-102219228 0.0002 [+14]_12 chr22:24428451-24428470 0.00025 1_[-14]_11 chr21:8154106-8154125 0.00029 12_[-14] chr21:6542579-6542598 0.00029 1_[+14]_11 chr21:6402160-6402179 0.00029 1_[+14]_11 chr21:2157227-2157246 0.00029 12_[-14] chr14:2931514-2931533 0.00029 1_[+14]_11 chr13:10075326-10075345 0.00029 1_[+14]_11 chr2:90711599-90711618 0.00029 7_[-14]_5 chr19:50948389-50948408 0.00033 11_[+14]_1 chr19:50943003-50943022 0.00033 11_[+14]_1 chr19:50937609-50937628 0.00033 11_[+14]_1 chr19:50926832-50926851 0.00033 11_[+14]_1 chr19:50921445-50921464 0.00033 11_[+14]_1 chr19:50916053-50916072 0.00033 11_[+14]_1 chr19:50910662-50910681 0.00033 11_[+14]_1 chr19:50905281-50905300 0.00033 11_[+14]_1 chr19:50899905-50899924 0.00033 11_[+14]_1 chr19:50894529-50894548 0.00033 11_[+14]_1 chr19:50889172-50889191 0.00033 11_[+14]_1 chr19:50883824-50883843 0.00033 11_[+14]_1 chr19:50878465-50878484 0.00033 11_[+14]_1 chr19:50873112-50873131 0.00033 11_[+14]_1 chrX:48813082-48813101 0.00037 9_[+14]_3 chrX:48794062-48794081 0.00037 9_[+14]_3 chr21:330540-330559 0.00037 1_[-14]_11 chr1:103533116-103533135 0.00037 [+14]_12 chr22:4139273-4139292 0.00042 3_[+14]_9 chr21:229845-229864 0.00042 1_[+14]_11 chr13:14254066-14254085 0.00042 1_[-14]_11 chr2:92202558-92202620 0.00042 16_[-14]_39 chr21:10788651-10788670 0.00045 1_[-14]_11 chr13:13711185-13711204 0.00045 1_[-14]_11 chr1:12639836-12639858 0.00045 4_[-14]_11 chr19:50734320-50734362 0.00054 9_[-14]_26 chr18:217979-217998 0.00054 10_[-14]_2 chr17:22542124-22542143 0.00054 [+14]_12 chr15:20747961-20747980 0.00054 9_[-14]_3 chr15:1777300-1777319 0.00054 11_[+14]_1 chr9:48143564-48143583 0.00054 2_[-14]_10 chr9:41251386-41251405 0.00054 2_[+14]_10 chr9:48357646-48357665 0.00058 8_[+14]_4 chr22:10373074-10373093 0.00065 3_[-14]_9 chr22:5801180-5801201 0.00065 11_[-14]_3 chr15:5345994-5346013 0.00065 11_[-14]_1 chr14:2930382-2930403 0.00065 11_[-14]_3 chr14:226090-226121 0.00065 24_[+14] chr13:10074193-10074212 0.00065 11_[-14]_1 chr2:92041756-92041776 0.00065 6_[-14]_7 chr1:108255411-108255430 0.00071 4_[+14]_8 chr17:38963146-38963165 0.00076 9_[+14]_3 chr15:14907804-14907823 0.00076 8_[-14]_4 chr21:8359960-8359979 0.00092 [+14]_12 chr19:38806555-38806574 0.00092 7_[+14]_5 chr15:1870889-1870908 0.00092 9_[+14]_3 chr9:76973043-76973062 0.00092 9_[+14]_3 chr9:48363899-48363918 0.00092 2_[+14]_10 chr9:48143629-48143648 0.00092 10_[-14]_2 chr2:90633304-90633323 0.00092 4_[-14]_8 chr1:12589529-12589548 0.00092 6_[+14]_6 chr1:12573587-12573606 0.00092 6_[-14]_6 chr22:6593664-6593683 0.0011 4_[-14]_8 chr21:7764563-7764582 0.0011 8_[+14]_4 chr21:2196331-2196350 0.0011 10_[-14]_2 chr15:15674933-15674952 0.0011 5_[+14]_7 chr13:10686040-10686059 0.0011 12_[-14] chr8:86770312-86770331 0.0011 2_[+14]_10 chr8:86575765-86575784 0.0011 2_[+14]_10 chrX:48769026-48769045 0.0012 8_[+14]_4 chrX:48740452-48740471 0.0012 10_[+14]_2 chrX:48730928-48730947 0.0012 10_[+14]_2 chr22:277573-277595 0.0013 4_[+14]_11 chr17:22763086-22763105 0.0013 11_[+14]_1 chr14:261031-261050 0.0013 1_[+14]_11 chr5:17459869-17459888 0.0013 12_[-14] chr22:3740224-3740243 0.0015 3_[+14]_9 chr20:25870797-25870816 0.0016 8_[-14]_4 chr20:25860824-25860843 0.0016 8_[-14]_4 chr9:79740139-79740158 0.0016 6_[-14]_6 chr22:9876627-9876659 0.0017 21_[-14]_4 chr17:38906719-38906738 0.0017 8_[+14]_4 chr17:37443069-37443088 0.0017 4_[-14]_8 chr16:80149371-80149390 0.0017 6_[+14]_6 chr22:4793747-4793766 0.0019 3_[-14]_9 chr21:3108289-3108308 0.0019 3_[-14]_9 chr16:34616380-34616399 0.0019 8_[-14]_4 chr15:2506430-2506449 0.0019 3_[-14]_9 chr14:2100007-2100026 0.0019 3_[-14]_9 chr13:5770609-5770628 0.0019 3_[-14]_9 chr21:7068326-7068345 0.0021 5_[-14]_7 chr14:7792251-7792270 0.0021 4_[-14]_8 chr15:20677173-20677217 0.0024 15_[+14]_22 chr14:13560855-13560880 0.0024 18_[-14] chr8:12339780-12339799 0.0029 4_[+14]_8 chr21:7278191-7278210 0.0036 6_[-14]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCCCDGV width=8 seqs=146 chr16:34616068-34616087 ( 11) TGCCCAGC 1 chr12:37374280-37374299 ( 11) TGCCCAGC 1 chrX:48712555-48712576 ( 11) TGCCCAGG 1 chr4:193536538-193536557 ( 2) TGCCCAGG 1 chr4:193533242-193533261 ( 2) TGCCCAGG 1 chr4:193529945-193529964 ( 2) TGCCCAGG 1 chr4:193526649-193526668 ( 2) TGCCCAGG 1 chr4:193523352-193523371 ( 2) TGCCCAGG 1 chr4:193520056-193520075 ( 2) TGCCCAGG 1 chr2:94959113-94959133 ( 12) TGCCCGGC 1 chr2:94737293-94737313 ( 3) TGCCCGGC 1 chr1:143521505-143521524 ( 3) TGCCCAGG 1 chr21:10551407-10551468 ( 31) TGCCCTGC 1 chr19:38923808-38923827 ( 11) TGCCCGGG 1 chr19:38918750-38918769 ( 11) TGCCCGGG 1 chr19:38880786-38880805 ( 11) TGCCCGGG 1 chr19:38830164-38830183 ( 11) TGCCCGGG 1 chr15:17158384-17158416 ( 2) TGCCCTGC 1 chr14:6658663-6658724 ( 25) TGCCCTGC 1 chr13:13473559-13473611 ( 31) TGCCCTGC 1 chr10:134699571-13469959 ( 13) TGCCCGGG 1 chr10:134696260-13469627 ( 13) TGCCCGGG 1 chr9:80192688-80192729 ( 5) TGCCCTGC 1 chr9:48147402-48147421 ( 3) TGCCCTGC 1 chr9:47778182-47778224 ( 5) TGCCCTGC 1 chr9:42020851-42020897 ( 16) TGCCCTGC 1 chr7:102278037-102278056 ( 6) GGCCCAGC 1 chr22:12356029-12356048 ( 2) GGCCCAGG 1 chr15:15575424-15575455 ( 2) GGCCCAGG 1 chr14:9623617-9623636 ( 2) GGCCCAGG 1 chr10:134723020-13472303 ( 10) GGCCCGGC 1 chr10:134719710-13471972 ( 10) GGCCCGGC 1 chr10:134716400-13471641 ( 10) GGCCCGGC 1 chr4:193540215-193540234 ( 10) GGCCCGGC 1 chr4:193536909-193536928 ( 10) GGCCCGGC 1 chr4:193533613-193533632 ( 10) GGCCCGGC 1 chr4:193530316-193530335 ( 10) GGCCCGGC 1 chr4:193527020-193527039 ( 10) GGCCCGGC 1 chr4:193523723-193523742 ( 10) GGCCCGGC 1 chr22:10370611-10370630 ( 12) GGCCCAGA 1 chr21:8782770-8782789 ( 13) TGCCCTGA 1 chr20:31318503-31318522 ( 10) TGCCCAGT 1 chr13:11693326-11693345 ( 13) TGCCCTGA 1 chr17:23343910-23343929 ( 13) TGCCTGGC 1 chr16:28943332-28943351 ( 6) TGCCTAGG 1 chr16:28733133-28733152 ( 8) TGCCTAGG 1 chr16:21333537-21333556 ( 8) TGCCTAGG 1 chr8:12346762-12346781 ( 11) TGCCTGGC 1 chr8:7372703-7372722 ( 12) TGCCTGGC 1 chr20:30626966-30626985 ( 10) TGCCCGGT 1 chr20:26280161-26280180 ( 12) TGCCCGGT 1 chr7:102219209-102219228 ( 1) TGCCCGGT 1 chr22:24428451-24428470 ( 2) TGCCAGGC 1 chr21:8154106-8154125 ( 13) TGCCCACC 1 chr21:6542579-6542598 ( 2) TGCCCACC 1 chr21:6402160-6402179 ( 2) TGCCCACC 1 chr21:2157227-2157246 ( 13) TGCCCACC 1 chr14:2931514-2931533 ( 2) TGCCCACC 1 chr13:10075326-10075345 ( 2) TGCCCACC 1 chr2:90711599-90711618 ( 8) TGCCTGGG 1 chr19:50948389-50948408 ( 12) TGCCAAGA 1 chr19:50943003-50943022 ( 12) TGCCAAGA 1 chr19:50937609-50937628 ( 12) TGCCAAGA 1 chr19:50926832-50926851 ( 12) TGCCAAGA 1 chr19:50921445-50921464 ( 12) TGCCAAGA 1 chr19:50916053-50916072 ( 12) TGCCAAGA 1 chr19:50910662-50910681 ( 12) TGCCAAGA 1 chr19:50905281-50905300 ( 12) TGCCAAGA 1 chr19:50899905-50899924 ( 12) TGCCAAGA 1 chr19:50894529-50894548 ( 12) TGCCAAGA 1 chr19:50889172-50889191 ( 12) TGCCAAGA 1 chr19:50883824-50883843 ( 12) TGCCAAGA 1 chr19:50878465-50878484 ( 12) TGCCAAGA 1 chr19:50873112-50873131 ( 12) TGCCAAGA 1 chrX:48813082-48813101 ( 10) TGCCATGC 1 chrX:48794062-48794081 ( 10) TGCCATGC 1 chr21:330540-330559 ( 2) TGCCTGGA 1 chr1:103533116-103533135 ( 1) TGCCTGGA 1 chr22:4139273-4139292 ( 4) TGCCTTGG 1 chr21:229845-229864 ( 2) TGCCCGCC 1 chr13:14254066-14254085 ( 2) GGCCTGGC 1 chr2:92202558-92202620 ( 17) TGCCCGCC 1 chr21:10788651-10788670 ( 2) TACCCAGC 1 chr13:13711185-13711204 ( 2) TACCCAGC 1 chr1:12639836-12639858 ( 5) TACCCAGC 1 chr19:50734320-50734362 ( 10) GGCCAGGC 1 chr18:217979-217998 ( 11) TGCCTAGT 1 chr17:22542124-22542143 ( 1) TGCCATGG 1 chr15:20747961-20747980 ( 10) GGCCAGGC 1 chr15:1777300-1777319 ( 12) TGCCTTGA 1 chr9:48143564-48143583 ( 3) TGCCCCGC 1 chr9:41251386-41251405 ( 3) TGCCTAGT 1 chr9:48357646-48357665 ( 9) TGCCCTCC 1 chr22:10373074-10373093 ( 4) TACCCGGC 1 chr22:5801180-5801201 ( 12) GGCCCTGT 1 chr15:5345994-5346013 ( 12) GGCCCTGT 1 chr14:2930382-2930403 ( 12) GGCCCTGT 1 chr14:226090-226121 ( 25) GGCCAAGA 1 chr13:10074193-10074212 ( 12) GGCCCTGT 1 chr2:92041756-92041776 ( 7) GGCCAAGA 1 chr1:108255411-108255430 ( 5) GGCCTGGA 1 chr17:38963146-38963165 ( 10) GGCCTTGG 1 chr15:14907804-14907823 ( 9) TACCCAGA 1 chr21:8359960-8359979 ( 1) GGCCCACA 1 chr19:38806555-38806574 ( 8) TGCCCACT 1 chr15:1870889-1870908 ( 10) GGCCCACA 1 chr9:76973043-76973062 ( 10) GGCCCACA 1 chr9:48363899-48363918 ( 3) GGCCTAGT 1 chr9:48143629-48143648 ( 11) GGCCTAGT 1 chr2:90633304-90633323 ( 5) GGCCATGG 1 chr1:12589529-12589548 ( 7) GGCCTTGA 1 chr1:12573587-12573606 ( 7) GGCCTTGA 1 chr22:6593664-6593683 ( 5) GGCCTGGT 1 chr21:7764563-7764582 ( 9) GGCCTGGT 1 chr21:2196331-2196350 ( 11) CGCCCGGC 1 chr15:15674933-15674952 ( 6) CGCCCGGC 1 chr13:10686040-10686059 ( 13) CGCCCAGG 1 chr8:86770312-86770331 ( 3) GGCCCCGG 1 chr8:86575765-86575784 ( 3) GGCCCCGG 1 chrX:48769026-48769045 ( 9) TACCCAGT 1 chrX:48740452-48740471 ( 11) TACCCAGT 1 chrX:48730928-48730947 ( 11) TACCCAGT 1 chr22:277573-277595 ( 5) TGACCAGC 1 chr17:22763086-22763105 ( 12) TGCCTTCC 1 chr14:261031-261050 ( 2) TGACCAGC 1 chr5:17459869-17459888 ( 13) CGCCCAGA 1 chr22:3740224-3740243 ( 4) TGCCTCGG 1 chr20:25870797-25870816 ( 9) GACCCTGG 1 chr20:25860824-25860843 ( 9) GACCCTGG 1 chr9:79740139-79740158 ( 7) TGACCAGG 1 chr22:9876627-9876659 ( 22) TGCCTCGA 1 chr17:38906719-38906738 ( 9) TACCCACC 1 chr17:37443069-37443088 ( 5) TACCCACC 1 chr16:80149371-80149390 ( 7) TACCTGGG 1 chr22:4793747-4793766 ( 4) TGCCTTCA 1 chr21:3108289-3108308 ( 4) TGCCTTCA 1 chr16:34616380-34616399 ( 9) TGCCTACT 1 chr15:2506430-2506449 ( 4) TGCCTTCA 1 chr14:2100007-2100026 ( 4) TGCCTTCA 1 chr13:5770609-5770628 ( 4) TGCCTTCA 1 chr21:7068326-7068345 ( 6) GACCTAGG 1 chr14:7792251-7792270 ( 5) GACCTAGG 1 chr15:20677173-20677217 ( 16) TACCATGG 1 chr14:13560855-13560880 ( 19) TACCATGG 1 chr8:12339780-12339799 ( 5) TGACAAGC 1 chr21:7278191-7278210 ( 7) TGACAAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 36489 bayes= 8.65976 E= 2.9e+045 -1383 -302 33 132 -125 -1383 199 -1383 -302 212 -1383 -1383 -1383 217 -1383 -1383 -58 139 -1383 -25 75 -270 26 -25 -1383 -56 193 -1383 -13 70 19 -109 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 146 E= 2.9e+045 0.000000 0.027397 0.280822 0.691781 0.116438 0.000000 0.883562 0.000000 0.034247 0.965753 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.184932 0.582192 0.000000 0.232877 0.465753 0.034247 0.267123 0.232877 0.000000 0.150685 0.849315 0.000000 0.253425 0.363014 0.253425 0.130137 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCCDGV MEME-14 regular expression -------------------------------------------------------------------------------- [TG]GCC[CT][AGT]G[CAG] -------------------------------------------------------------------------------- Time 209.18 secs. ******************************************************************************** ******************************************************************************** MOTIF AAWGARMA MEME-15 width = 8 sites = 130 llr = 852 E-value = 4.6e+052 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 Description -------------------------------------------------------------------------------- Simplified A 88639579 pos.-specific C 12::1:3: probability G :::7:5:: matrix T ::4::::: bits 2.2 1.9 1.7 1.5 * * Relative 1.3 ** * Entropy 1.1 ** ***** (9.5 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAGAGAA consensus TA AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------- chr7:60027982-60028001 - 1 2.25e-05 GAATTGCAGT AAAGAGAA chr7:59951319-59951338 - 5 2.25e-05 GTTGTAGT AAAGAGAA AGAA chr7:59398339-59398358 + 9 2.25e-05 ATTGTAGT AAAGagaa agaa chr7:59196249-59196268 + 9 2.25e-05 ATTGTAGT AAAGagaa agaa chr7:58634543-58634562 - 5 2.25e-05 ATTGTAGT AAAGAGAA AGAA chr7:58343782-58343801 + 9 2.25e-05 ATTTTAGT AAAGagaa agaa chr20:31213874-31213897 + 13 4.49e-05 GAGATAAaac aatgagaa agga chr1:145828295-145828314 + 8 4.49e-05 tttttta aatgagaa gtcat chr22:19163907-19163926 + 3 9.09e-05 ga aaagaaaa GTTCTTCTGA chr22:18874882-18874901 - 11 9.09e-05 GA AAAGAAAA CCATACAAGA chr22:16961131-16961164 + 26 9.09e-05 tccattcGAA AAAGAAAA A chr22:12325041-12325060 - 8 9.09e-05 TGGAG AAAGAAAA TGTAGAA chr22:11309935-11309969 - 1 9.09e-05 TCCATTCGAA AAAGAAAA chr22:6428235-6428269 + 28 9.09e-05 tccattcGAA AAAGAAAA chr20:31081365-31081384 - 3 9.09e-05 AAAAAGCATT AAAGAAAA GG chr19:50734320-50734362 - 32 9.09e-05 AAAA AAAGAAAA AAAAAAAAAA chr17:22398572-22398591 + 13 9.09e-05 tccattcGAA AAAGAAAA chr17:22293678-22293697 + 13 9.09e-05 tccattcGAA AAAGAAAA chr15:17166529-17166548 + 8 9.09e-05 caagcta aaagagca tgttc chr7:59285900-59285919 - 1 9.09e-05 TCCATTCGAA AAAGAAAA chr2:95014419-95014438 + 3 9.09e-05 tc aaagaaaa ggtttacctc chr1:129004443-129004462 - 1 9.09e-05 TCCATTCGAA AAAGAAAA chr1:128901461-128901480 + 13 9.09e-05 tccattcGAA AAAGAAAA chr1:128783762-128783781 + 13 9.09e-05 tccattcGAA AAAGAAAA chr22:4793747-4793766 + 13 1.37e-04 ttgaaGGCAA AATGAAAA chr21:10547820-10547839 + 12 1.37e-04 cctgctcctg aatgagca c chr21:7817612-7817659 - 10 1.37e-04 AACAATCAGG AATGAGCA TTCCCAAGA chr21:7099853-7099900 - 10 1.37e-04 AACAATCAGG AATGAGCA TTCCCAAGA chr21:3108289-3108308 + 13 1.37e-04 ttgaaGGCAA AATGAAAA chr15:17154843-17154862 + 12 1.37e-04 cctgctcctg aatgagca c chr15:15020893-15020912 + 4 1.37e-04 aga aatgaaaa ttaagtgat chr15:2506430-2506449 + 13 1.37e-04 ttgaaGGCAA AATGAAAA chr14:6662285-6662304 - 2 1.37e-04 CCTGCTCCTG AATGAGCA C chr14:2100007-2100026 + 13 1.37e-04 ttgaaGGCAA AATGAAAA chr13:13469979-13469998 + 12 1.37e-04 cctgctcctg aatgagca c chr13:5770609-5770628 + 13 1.37e-04 ttgaaGGCAA AATGAAAA chr9:80340010-80340029 + 12 1.37e-04 cctgctcctg aatgagca c chr9:80196263-80196282 - 2 1.37e-04 CCTGCTCCTG AATGAGCA C chr9:79932069-79932088 - 12 1.37e-04 C AATGAAAA TCAATATATA chr9:79777614-79777633 + 6 1.37e-04 ggagt aatgagCA CACCTAT chr9:77768562-77768581 - 8 1.37e-04 GGAGT AATGAGCA CACCTAT chr9:77614114-77614133 + 2 1.37e-04 c aatgaAAA TCAATATATA chr9:47781769-47781788 - 2 1.37e-04 CCTGCTCCTG AATGAGCA C chr9:42924091-42924110 - 8 1.37e-04 GGAGT AATGAGCA CACCTAT chr9:42017299-42017318 + 12 1.37e-04 cctgctcctg aatgagca c chr9:40804628-40804647 - 2 1.37e-04 CCTGCTCCTG AATGAGCA C chr9:40530731-40530750 - 12 1.37e-04 C AATGAAAA TCAATATATA chr9:40373305-40373324 + 6 1.37e-04 ggagt aatgagCA CACCTAT chr20:26306279-26306298 - 5 1.59e-04 CTAAGCCA AAAGAACA AAGC chr5:71299690-71299709 - 5 2.46e-04 CAAATTTA CAAGAGAA AAAC chr5:70919455-70919474 + 9 2.46e-04 caaattta caagagaa aaac chr22:6599067-6599086 - 11 2.74e-04 TA AATAAGAA CCGGGTGTGG chr21:7759147-7759166 + 3 2.74e-04 TA AATAAGAA ccgggtgtgg chr15:5932735-5932754 - 11 2.74e-04 TA AATAAGAA CCGGGTGTGG chr14:3525789-3525808 - 11 2.74e-04 TA AATAAGAA CCGGGTGTGG chr13:10660691-10660710 - 11 2.74e-04 TA AATAAGAA CCGGGTGTGG chr2:96386430-96386449 - 11 2.74e-04 TA AATAAGAA CCGGGTGTGG chr22:6708587-6708606 + 6 3.49e-04 gtctc aaaaaaaa GAGCTAT chr19:53132380-53132399 + 1 3.49e-04 . aaaaaaaa aaaTtgcccc chr19:8732476-8732495 + 9 3.49e-04 ctgtgtca aaaaaaaa TGGT chr17:19084141-19084160 - 11 3.49e-04 TT AAAAAAAA ATAGACTGGG chr17:19006507-19006526 - 11 3.49e-04 TT AAAAAAAA ATAGACTGGG chr16:35634403-35634422 + 13 3.49e-04 TCTCGAAACA AAAAAAAa chr16:34217076-34217095 - 2 3.49e-04 GCGGTGGGGC AAAAAGCA G chr16:33633290-33633346 - 10 3.49e-04 CGGCGGGGGC AAAAAAAA TATATATAT chr15:20857011-20857030 - 12 3.49e-04 A AAAAAAAA AGAGACCGGT chr8:7642885-7642904 + 1 3.49e-04 . aaaaaaaa aagccacctg chr7:145034555-145034574 - 10 3.49e-04 TGT ACTGAGAA GGAAACTTA chr7:76482512-76482531 - 13 3.49e-04 . AAAAAAAA TAGCTGGGTG chr9:78266128-78266149 - 6 4.04e-04 GAGAACAGC ACAGAGCA AAATG chr9:41321940-41321959 - 9 4.04e-04 GGAT CATGAGAA CCGTGAGG chr9:39893139-39893158 + 10 4.04e-04 gagaacagc acagAGCA AAA chr8:86943918-86943937 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86931728-86931747 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86907350-86907369 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86883245-86883264 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86374671-86374690 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86350293-86350312 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86325914-86325933 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr8:86313722-86313741 + 12 4.04e-04 tggtgcctct ACAGAAAA A chr3:95879516-95879535 - 11 4.04e-04 AG ACAGAGCA GATTGGAAAC chr3:95876625-95876644 - 11 4.04e-04 AG ACAGAGCA GATTGGAAAC chr3:95870843-95870862 - 11 4.04e-04 AG ACAGAGCA GATTGGAAAC chr11:50337995-50338014 + 8 4.41e-04 tgggcaa caagagca aaact chr7:145040548-145040567 - 8 4.41e-04 GCTAG CAAGAAAA TACTTGT chr7:59108067-59108086 - 5 4.41e-04 TTGCAACC CAAGAGCA TGGA chr7:58651180-58651199 + 9 4.41e-04 ttgcaacc caagagca tgga chr19:40112909-40112928 - 3 4.98e-04 CTTTTTTTGC AATAAAAA GG chr15:21463849-21463868 - 11 4.98e-04 TA AATAAAAA AAGATTTTTA chr14:1768400-1768441 + 7 4.98e-04 taaaaa aataaaaa aaataaaaaa chr7:145458896-145458915 - 11 4.98e-04 AA AATAAAAA TCTAGAGAGA chr1:12576034-12576053 + 1 4.98e-04 . aataaaaa aaTCATTCAT chr22:11311974-11311993 - 11 5.81e-04 GA AAAAAACA GCCTTTCATG chr16:32929932-32929951 - 4 5.81e-04 AGTGGTGAG AAAGCGAA TAT chr13:11594141-11594160 + 11 5.81e-04 aggaacttgg aaaaaaca tc chr9:79940981-79941000 + 4 6.36e-04 att acagaaca ctgctacga chr7:59326799-59326818 + 9 6.36e-04 ttcctacc catgagca tgga chr22:9958357-9958409 + 3 7.56e-04 GC AAAGCAAA TTTATCTGTA chr17:23090734-23090753 + 6 7.56e-04 cagcc aaagcgca tgcgcga chr17:23088359-23088378 + 6 7.56e-04 cagcc aaagcgca tgcgcga chr17:23083693-23083712 + 6 7.56e-04 cagcc aaagcgca tgcgcga chrX:71162388-71162407 - 5 7.96e-04 GCAAGCCT CATGAACA GACA chr15:15016272-15016291 - 9 7.96e-04 TATC ACAAAGAA GTTTCTCA chr14:4458011-4458030 - 2 7.96e-04 GATTGCATCA ACAAAGAA A chr1:143500877-143500896 + 4 7.96e-04 caa acaaagaa ctgtacatg chr19:39943925-39943944 - 3 9.29e-04 AGCGGCTGAC ACTAAGAA CA chr19:38984851-38984870 + 11 9.29e-04 agcggctgAC ACTAAGAA CA chr15:21392590-21392609 + 5 1.06e-03 gatc cctgagaa atcAGAGC chr14:7960060-7960079 + 6 1.06e-03 ttaga caaaagca ttctgac chr17:23078448-23078467 - 2 1.12e-03 CTGGCGTATA CCAGAGCA G chr17:23045422-23045441 - 2 1.12e-03 CTGGCGTATA CCAGAGCA G chr7:58572513-58572549 - 26 1.12e-03 AGTG AATGAGAC TCCTTCTCAA chr21:9297592-9297611 + 6 1.31e-03 aaaac cataaaaa ccctaga chr19:50875655-50875674 + 1 1.47e-03 . aatgaaac ccaaagttga chr19:50870301-50870320 + 1 1.47e-03 . aatgaaac ccaaagttga chr17:19051318-19051337 - 13 1.47e-03 . AGAGAGAA AAATCCGTGG chr16:35317609-35317628 + 13 1.47e-03 gtgcaGATTC AATGAGCC chr16:35315728-35315747 + 12 1.47e-03 tgcgcagttc aatgagcc c chr13:10180811-10180830 - 2 1.47e-03 TCTTCTTTAA AGAGAGAA A chr17:38906719-38906738 + 1 1.59e-03 . AAAACAAA Tacccaccct chr17:37443069-37443088 - 13 1.59e-03 . AAAACAAA TACCCACCCT chr16:34778626-34778647 + 13 1.59e-03 agccagccgg aaagagag ag chr7:59196461-59196480 + 6 1.59e-03 gaaag aaagagag atagaga chr7:58595454-58595473 - 1 1.68e-03 GAGTTGTAGA TAAGAGAA chr22:6587418-6587437 + 6 2.12e-03 AAAGA CATgcgca atcctgg chr15:20876047-20876066 + 10 2.12e-03 aattaatAG TAAGAGCA ATG chr15:5921014-5921033 + 8 2.12e-03 TGAAAGA CATgcgca atcct chr14:3514135-3514154 + 8 2.12e-03 TGAAAGA CATgcgca atcct chr13:10648967-10648986 + 8 2.12e-03 TGAAAGA CATgcgca atcct chr22:24480338-24480357 + 9 2.58e-03 gttctgcc catgcaca gtaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:60027982-60028001 2.2e-05 [-15]_12 chr7:59951319-59951338 2.2e-05 4_[-15]_8 chr7:59398339-59398358 2.2e-05 8_[+15]_4 chr7:59196249-59196268 2.2e-05 8_[+15]_4 chr7:58634543-58634562 2.2e-05 4_[-15]_8 chr7:58343782-58343801 2.2e-05 8_[+15]_4 chr20:31213874-31213897 4.5e-05 12_[+15]_4 chr1:145828295-145828314 4.5e-05 7_[+15]_5 chr22:19163907-19163926 9.1e-05 2_[+15]_10 chr22:18874882-18874901 9.1e-05 10_[-15]_2 chr22:16961131-16961164 9.1e-05 25_[+15]_1 chr22:12325041-12325060 9.1e-05 7_[-15]_5 chr22:11309935-11309969 9.1e-05 [-15]_27 chr22:6428235-6428269 9.1e-05 27_[+15] chr20:31081365-31081384 9.1e-05 2_[-15]_10 chr19:50734320-50734362 9.1e-05 31_[-15]_4 chr17:22398572-22398591 9.1e-05 12_[+15] chr17:22293678-22293697 9.1e-05 12_[+15] chr15:17166529-17166548 9.1e-05 7_[+15]_5 chr7:59285900-59285919 9.1e-05 [-15]_12 chr2:95014419-95014438 9.1e-05 2_[+15]_10 chr1:129004443-129004462 9.1e-05 [-15]_12 chr1:128901461-128901480 9.1e-05 12_[+15] chr1:128783762-128783781 9.1e-05 12_[+15] chr22:4793747-4793766 0.00014 12_[+15] chr21:10547820-10547839 0.00014 11_[+15]_1 chr21:7817612-7817659 0.00014 9_[-15]_31 chr21:7099853-7099900 0.00014 9_[-15]_31 chr21:3108289-3108308 0.00014 12_[+15] chr15:17154843-17154862 0.00014 11_[+15]_1 chr15:15020893-15020912 0.00014 3_[+15]_9 chr15:2506430-2506449 0.00014 12_[+15] chr14:6662285-6662304 0.00014 1_[-15]_11 chr14:2100007-2100026 0.00014 12_[+15] chr13:13469979-13469998 0.00014 11_[+15]_1 chr13:5770609-5770628 0.00014 12_[+15] chr9:80340010-80340029 0.00014 11_[+15]_1 chr9:80196263-80196282 0.00014 1_[-15]_11 chr9:79932069-79932088 0.00014 11_[-15]_1 chr9:79777614-79777633 0.00014 5_[+15]_7 chr9:77768562-77768581 0.00014 7_[-15]_5 chr9:77614114-77614133 0.00014 1_[+15]_11 chr9:47781769-47781788 0.00014 1_[-15]_11 chr9:42924091-42924110 0.00014 7_[-15]_5 chr9:42017299-42017318 0.00014 11_[+15]_1 chr9:40804628-40804647 0.00014 1_[-15]_11 chr9:40530731-40530750 0.00014 11_[-15]_1 chr9:40373305-40373324 0.00014 5_[+15]_7 chr20:26306279-26306298 0.00016 4_[-15]_8 chr5:71299690-71299709 0.00025 4_[-15]_8 chr5:70919455-70919474 0.00025 8_[+15]_4 chr22:6599067-6599086 0.00027 10_[-15]_2 chr21:7759147-7759166 0.00027 2_[+15]_10 chr15:5932735-5932754 0.00027 10_[-15]_2 chr14:3525789-3525808 0.00027 10_[-15]_2 chr13:10660691-10660710 0.00027 10_[-15]_2 chr2:96386430-96386449 0.00027 10_[-15]_2 chr22:6708587-6708606 0.00035 5_[+15]_7 chr19:53132380-53132399 0.00035 [+15]_12 chr19:8732476-8732495 0.00035 8_[+15]_4 chr17:19084141-19084160 0.00035 10_[-15]_2 chr17:19006507-19006526 0.00035 10_[-15]_2 chr16:35634403-35634422 0.00035 12_[+15] chr16:34217076-34217095 0.00035 1_[-15]_11 chr16:33633290-33633346 0.00035 9_[-15]_40 chr15:20857011-20857030 0.00035 11_[-15]_1 chr8:7642885-7642904 0.00035 [+15]_12 chr7:145034555-145034574 0.00035 9_[-15]_3 chr7:76482512-76482531 0.00035 12_[-15] chr9:78266128-78266149 0.0004 5_[-15]_9 chr9:41321940-41321959 0.0004 8_[-15]_4 chr9:39893139-39893158 0.0004 9_[+15]_3 chr8:86943918-86943937 0.0004 11_[+15]_1 chr8:86931728-86931747 0.0004 11_[+15]_1 chr8:86907350-86907369 0.0004 11_[+15]_1 chr8:86883245-86883264 0.0004 11_[+15]_1 chr8:86374671-86374690 0.0004 11_[+15]_1 chr8:86350293-86350312 0.0004 11_[+15]_1 chr8:86325914-86325933 0.0004 11_[+15]_1 chr8:86313722-86313741 0.0004 11_[+15]_1 chr3:95879516-95879535 0.0004 10_[-15]_2 chr3:95876625-95876644 0.0004 10_[-15]_2 chr3:95870843-95870862 0.0004 10_[-15]_2 chr11:50337995-50338014 0.00044 7_[+15]_5 chr7:145040548-145040567 0.00044 7_[-15]_5 chr7:59108067-59108086 0.00044 4_[-15]_8 chr7:58651180-58651199 0.00044 8_[+15]_4 chr19:40112909-40112928 0.0005 2_[-15]_10 chr15:21463849-21463868 0.0005 10_[-15]_2 chr14:1768400-1768441 0.0005 6_[+15]_28 chr7:145458896-145458915 0.0005 10_[-15]_2 chr1:12576034-12576053 0.0005 [+15]_12 chr22:11311974-11311993 0.00058 10_[-15]_2 chr16:32929932-32929951 0.00058 3_[-15]_9 chr13:11594141-11594160 0.00058 10_[+15]_2 chr9:79940981-79941000 0.00064 3_[+15]_9 chr7:59326799-59326818 0.00064 8_[+15]_4 chr22:9958357-9958409 0.00076 2_[+15]_43 chr17:23090734-23090753 0.00076 5_[+15]_7 chr17:23088359-23088378 0.00076 5_[+15]_7 chr17:23083693-23083712 0.00076 5_[+15]_7 chrX:71162388-71162407 0.0008 4_[-15]_8 chr15:15016272-15016291 0.0008 8_[-15]_4 chr14:4458011-4458030 0.0008 1_[-15]_11 chr1:143500877-143500896 0.0008 3_[+15]_9 chr19:39943925-39943944 0.00093 2_[-15]_10 chr19:38984851-38984870 0.00093 10_[+15]_2 chr15:21392590-21392609 0.0011 4_[+15]_8 chr14:7960060-7960079 0.0011 5_[+15]_7 chr17:23078448-23078467 0.0011 1_[-15]_11 chr17:23045422-23045441 0.0011 1_[-15]_11 chr7:58572513-58572549 0.0011 25_[-15]_4 chr21:9297592-9297611 0.0013 5_[+15]_7 chr19:50875655-50875674 0.0015 [+15]_12 chr19:50870301-50870320 0.0015 [+15]_12 chr17:19051318-19051337 0.0015 12_[-15] chr16:35317609-35317628 0.0015 12_[+15] chr16:35315728-35315747 0.0015 11_[+15]_1 chr13:10180811-10180830 0.0015 1_[-15]_11 chr17:38906719-38906738 0.0016 [+15]_12 chr17:37443069-37443088 0.0016 12_[-15] chr16:34778626-34778647 0.0016 12_[+15]_2 chr7:59196461-59196480 0.0016 5_[+15]_7 chr7:58595454-58595473 0.0017 [-15]_12 chr22:6587418-6587437 0.0021 5_[+15]_7 chr15:20876047-20876066 0.0021 9_[+15]_3 chr15:5921014-5921033 0.0021 7_[+15]_5 chr14:3514135-3514154 0.0021 7_[+15]_5 chr13:10648967-10648986 0.0021 7_[+15]_5 chr22:24480338-24480357 0.0026 8_[+15]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAWGARMA width=8 seqs=130 chr7:60027982-60028001 ( 1) AAAGAGAA 1 chr7:59951319-59951338 ( 5) AAAGAGAA 1 chr7:59398339-59398358 ( 9) AAAGAGAA 1 chr7:59196249-59196268 ( 9) AAAGAGAA 1 chr7:58634543-58634562 ( 5) AAAGAGAA 1 chr7:58343782-58343801 ( 9) AAAGAGAA 1 chr20:31213874-31213897 ( 13) AATGAGAA 1 chr1:145828295-145828314 ( 8) AATGAGAA 1 chr22:19163907-19163926 ( 3) AAAGAAAA 1 chr22:18874882-18874901 ( 11) AAAGAAAA 1 chr22:16961131-16961164 ( 26) AAAGAAAA 1 chr22:12325041-12325060 ( 8) AAAGAAAA 1 chr22:11309935-11309969 ( 1) AAAGAAAA 1 chr22:6428235-6428269 ( 28) AAAGAAAA 1 chr20:31081365-31081384 ( 3) AAAGAAAA 1 chr19:50734320-50734362 ( 32) AAAGAAAA 1 chr17:22398572-22398591 ( 13) AAAGAAAA 1 chr17:22293678-22293697 ( 13) AAAGAAAA 1 chr15:17166529-17166548 ( 8) AAAGAGCA 1 chr7:59285900-59285919 ( 1) AAAGAAAA 1 chr2:95014419-95014438 ( 3) AAAGAAAA 1 chr1:129004443-129004462 ( 1) AAAGAAAA 1 chr1:128901461-128901480 ( 13) AAAGAAAA 1 chr1:128783762-128783781 ( 13) AAAGAAAA 1 chr22:4793747-4793766 ( 13) AATGAAAA 1 chr21:10547820-10547839 ( 12) AATGAGCA 1 chr21:7817612-7817659 ( 10) AATGAGCA 1 chr21:7099853-7099900 ( 10) AATGAGCA 1 chr21:3108289-3108308 ( 13) AATGAAAA 1 chr15:17154843-17154862 ( 12) AATGAGCA 1 chr15:15020893-15020912 ( 4) AATGAAAA 1 chr15:2506430-2506449 ( 13) AATGAAAA 1 chr14:6662285-6662304 ( 2) AATGAGCA 1 chr14:2100007-2100026 ( 13) AATGAAAA 1 chr13:13469979-13469998 ( 12) AATGAGCA 1 chr13:5770609-5770628 ( 13) AATGAAAA 1 chr9:80340010-80340029 ( 12) AATGAGCA 1 chr9:80196263-80196282 ( 2) AATGAGCA 1 chr9:79932069-79932088 ( 12) AATGAAAA 1 chr9:79777614-79777633 ( 6) AATGAGCA 1 chr9:77768562-77768581 ( 8) AATGAGCA 1 chr9:77614114-77614133 ( 2) AATGAAAA 1 chr9:47781769-47781788 ( 2) AATGAGCA 1 chr9:42924091-42924110 ( 8) AATGAGCA 1 chr9:42017299-42017318 ( 12) AATGAGCA 1 chr9:40804628-40804647 ( 2) AATGAGCA 1 chr9:40530731-40530750 ( 12) AATGAAAA 1 chr9:40373305-40373324 ( 6) AATGAGCA 1 chr20:26306279-26306298 ( 5) AAAGAACA 1 chr5:71299690-71299709 ( 5) CAAGAGAA 1 chr5:70919455-70919474 ( 9) CAAGAGAA 1 chr22:6599067-6599086 ( 11) AATAAGAA 1 chr21:7759147-7759166 ( 3) AATAAGAA 1 chr15:5932735-5932754 ( 11) AATAAGAA 1 chr14:3525789-3525808 ( 11) AATAAGAA 1 chr13:10660691-10660710 ( 11) AATAAGAA 1 chr2:96386430-96386449 ( 11) AATAAGAA 1 chr22:6708587-6708606 ( 6) AAAAAAAA 1 chr19:53132380-53132399 ( 1) AAAAAAAA 1 chr19:8732476-8732495 ( 9) AAAAAAAA 1 chr17:19084141-19084160 ( 11) AAAAAAAA 1 chr17:19006507-19006526 ( 11) AAAAAAAA 1 chr16:35634403-35634422 ( 13) AAAAAAAA 1 chr16:34217076-34217095 ( 2) AAAAAGCA 1 chr16:33633290-33633346 ( 10) AAAAAAAA 1 chr15:20857011-20857030 ( 12) AAAAAAAA 1 chr8:7642885-7642904 ( 1) AAAAAAAA 1 chr7:145034555-145034574 ( 10) ACTGAGAA 1 chr7:76482512-76482531 ( 13) AAAAAAAA 1 chr9:78266128-78266149 ( 6) ACAGAGCA 1 chr9:41321940-41321959 ( 9) CATGAGAA 1 chr9:39893139-39893158 ( 10) ACAGAGCA 1 chr8:86943918-86943937 ( 12) ACAGAAAA 1 chr8:86931728-86931747 ( 12) ACAGAAAA 1 chr8:86907350-86907369 ( 12) ACAGAAAA 1 chr8:86883245-86883264 ( 12) ACAGAAAA 1 chr8:86374671-86374690 ( 12) ACAGAAAA 1 chr8:86350293-86350312 ( 12) ACAGAAAA 1 chr8:86325914-86325933 ( 12) ACAGAAAA 1 chr8:86313722-86313741 ( 12) ACAGAAAA 1 chr3:95879516-95879535 ( 11) ACAGAGCA 1 chr3:95876625-95876644 ( 11) ACAGAGCA 1 chr3:95870843-95870862 ( 11) ACAGAGCA 1 chr11:50337995-50338014 ( 8) CAAGAGCA 1 chr7:145040548-145040567 ( 8) CAAGAAAA 1 chr7:59108067-59108086 ( 5) CAAGAGCA 1 chr7:58651180-58651199 ( 9) CAAGAGCA 1 chr19:40112909-40112928 ( 3) AATAAAAA 1 chr15:21463849-21463868 ( 11) AATAAAAA 1 chr14:1768400-1768441 ( 7) AATAAAAA 1 chr7:145458896-145458915 ( 11) AATAAAAA 1 chr1:12576034-12576053 ( 1) AATAAAAA 1 chr22:11311974-11311993 ( 11) AAAAAACA 1 chr16:32929932-32929951 ( 4) AAAGCGAA 1 chr13:11594141-11594160 ( 11) AAAAAACA 1 chr9:79940981-79941000 ( 4) ACAGAACA 1 chr7:59326799-59326818 ( 9) CATGAGCA 1 chr22:9958357-9958409 ( 3) AAAGCAAA 1 chr17:23090734-23090753 ( 6) AAAGCGCA 1 chr17:23088359-23088378 ( 6) AAAGCGCA 1 chr17:23083693-23083712 ( 6) AAAGCGCA 1 chrX:71162388-71162407 ( 5) CATGAACA 1 chr15:15016272-15016291 ( 9) ACAAAGAA 1 chr14:4458011-4458030 ( 2) ACAAAGAA 1 chr1:143500877-143500896 ( 4) ACAAAGAA 1 chr19:39943925-39943944 ( 3) ACTAAGAA 1 chr19:38984851-38984870 ( 11) ACTAAGAA 1 chr15:21392590-21392609 ( 5) CCTGAGAA 1 chr14:7960060-7960079 ( 6) CAAAAGCA 1 chr17:23078448-23078467 ( 2) CCAGAGCA 1 chr17:23045422-23045441 ( 2) CCAGAGCA 1 chr7:58572513-58572549 ( 26) AATGAGAC 1 chr21:9297592-9297611 ( 6) CATAAAAA 1 chr19:50875655-50875674 ( 1) AATGAAAC 1 chr19:50870301-50870320 ( 1) AATGAAAC 1 chr17:19051318-19051337 ( 13) AGAGAGAA 1 chr16:35317609-35317628 ( 13) AATGAGCC 1 chr16:35315728-35315747 ( 12) AATGAGCC 1 chr13:10180811-10180830 ( 2) AGAGAGAA 1 chr17:38906719-38906738 ( 1) AAAACAAA 1 chr17:37443069-37443088 ( 13) AAAACAAA 1 chr16:34778626-34778647 ( 13) AAAGAGAG 1 chr7:59196461-59196480 ( 6) AAAGAGAG 1 chr7:58595454-58595473 ( 1) TAAGAGAA 1 chr22:6587418-6587437 ( 6) CATGCGCA 1 chr15:20876047-20876066 ( 10) TAAGAGCA 1 chr15:5921014-5921033 ( 8) CATGCGCA 1 chr14:3514135-3514154 ( 8) CATGCGCA 1 chr13:10648967-10648986 ( 8) CATGCGCA 1 chr22:24480338-24480357 ( 9) CATGCACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 36489 bayes= 8.71211 E= 4.6e+052 160 -61 -1367 -417 154 -33 -385 -1367 106 -1367 -1367 61 -13 -1367 174 -1367 171 -127 -1367 -1367 74 -1367 127 -1367 124 64 -1367 -1367 177 -253 -385 -1367 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 130 E= 4.6e+052 0.838462 0.146154 0.000000 0.015385 0.807692 0.176923 0.015385 0.000000 0.576923 0.000000 0.000000 0.423077 0.253846 0.000000 0.746154 0.000000 0.907692 0.092308 0.000000 0.000000 0.461538 0.000000 0.538462 0.000000 0.653846 0.346154 0.000000 0.000000 0.946154 0.038462 0.015385 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWGARMA MEME-15 regular expression -------------------------------------------------------------------------------- AA[AT][GA]A[GA][AC]A -------------------------------------------------------------------------------- Time 216.71 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:24283-24302 7.69e-01 20 chr1:26445-26464 3.69e-01 20 chr1:12399495-12399514 8.85e-01 20 chr1:12561514-12561533 6.06e-01 20 chr1:12571513-12571532 2.03e-01 20 chr1:12573587-12573606 1.22e-01 20 chr1:12573881-12573900 3.58e-05 [-4(1.91e-08)]_5 chr1:12576034-12576053 1.62e-02 20 chr1:12589529-12589548 4.31e-02 20 chr1:12591642-12591661 3.26e-01 20 chr1:12591909-12591928 8.87e-03 20 chr1:12639836-12639858 2.80e-01 23 chr1:12663105-12663124 2.33e-03 [-12(6.69e-05)]_[-7(3.38e-05)]_1 chr1:12791177-12791196 6.52e-01 20 chr1:16129952-16129971 7.41e-01 20 chr1:16156546-16156565 7.37e-01 20 chr1:16168905-16168924 2.60e-02 [+4(2.77e-05)]_5 chr1:16173618-16173637 2.60e-02 [+4(2.77e-05)]_5 chr1:16214536-16214555 8.39e-02 20 chr1:16361339-16361358 2.69e-01 20 chr1:16385317-16385336 6.68e-01 20 chr1:16402877-16402896 2.50e-01 20 chr1:16439576-16439595 3.49e-02 20 chr1:16483233-16483252 2.69e-01 20 chr1:16656620-16656639 6.80e-01 20 chr1:103533116-103533135 6.34e-02 20 chr1:103557683-103557702 1.60e-02 20 chr1:103572578-103572597 3.86e-01 20 chr1:103581663-103581685 3.10e-01 23 chr1:103586482-103586501 9.78e-02 20 chr1:103611044-103611066 1.18e-01 7_[+9(3.20e-07)]_1 chr1:103616489-103616508 9.72e-01 20 chr1:103627264-103627283 4.04e-01 20 chr1:103651827-103651846 1.60e-02 20 chr1:103656644-103656666 3.10e-01 23 chr1:103665732-103665751 3.86e-01 20 chr1:103680615-103680634 1.60e-02 20 chr1:103705179-103705198 6.27e-02 5_[+9(3.20e-07)] chr1:108255411-108255430 1.53e-02 20 chr1:108281662-108281681 2.46e-02 20 chr1:108356151-108356170 4.89e-02 20 chr1:108479873-108479892 2.46e-02 20 chr1:126865478-126865497 8.65e-01 20 chr1:126871617-126871636 1.98e-02 3_[+4(4.42e-06)]_2 chr1:126884029-126884048 1.15e-01 20 chr1:126884063-126884082 8.88e-01 20 chr1:126891744-126891763 1.28e-02 3_[-8(4.59e-06)]_2 chr1:126892657-126892676 9.79e-01 20 chr1:126899479-126899498 7.93e-01 20 chr1:126919265-126919284 2.49e-01 7_[-6(8.00e-05)]_2 chr1:127715231-127715250 5.11e-02 3_[-6(2.76e-05)]_6 chr1:127766676-127766695 1.20e-01 20 chr1:127888877-127888896 3.56e-02 2_[+4(2.02e-05)]_3 chr1:127938788-127938807 6.96e-05 5_[-8(1.53e-07)] chr1:128735083-128735102 8.62e-01 20 chr1:128774783-128774802 7.83e-02 3_[-6(8.68e-07)]_6 chr1:128783762-128783781 9.28e-03 [-6(8.68e-07)]_1_[+15(9.09e-05)] chr1:128807220-128807239 1.15e-01 20 chr1:128814926-128814945 1.28e-02 3_[-8(4.59e-06)]_2 chr1:128815841-128815860 9.43e-01 20 chr1:128822657-128822676 7.93e-01 20 chr1:128833692-128833711 9.47e-02 20 chr1:128841286-128841305 7.90e-03 2_[+6(4.00e-05)]_7 chr1:128848056-128848075 7.03e-03 [-4(2.70e-08)]_5 chr1:128860309-128860328 9.64e-04 [-11(1.29e-07)]_5 chr1:128861558-128861577 9.79e-01 20 chr1:128868336-128868355 7.15e-01 20 chr1:128879823-128879842 4.27e-02 [-6(8.68e-07)]_9 chr1:128891286-128891305 4.96e-01 2_[-6(7.27e-06)]_7 chr1:128892420-128892439 6.51e-02 3_[-6(1.42e-05)]_6 chr1:128892457-128892476 1.85e-01 20 chr1:128901461-128901480 9.28e-03 [-6(8.68e-07)]_1_[+15(9.09e-05)] chr1:128902010-128902029 1.39e-01 20 chr1:128909003-128909022 3.06e-02 2_[-4(7.37e-06)]_3 chr1:128927066-128927085 2.98e-04 5_[+11(1.29e-07)] chr1:128929123-128929142 1.06e-01 20 chr1:128944246-128944265 7.90e-03 7_[-6(4.00e-05)]_2 chr1:128954510-128954529 9.47e-02 20 chr1:128965545-128965564 7.93e-01 20 chr1:128972361-128972380 9.43e-01 20 chr1:128973276-128973295 1.28e-02 2_[+8(4.59e-06)]_3 chr1:128980976-128981017 8.63e-04 14_[+4(1.45e-05)]_13 chr1:128994322-128994341 1.06e-01 20 chr1:129003893-129003912 7.14e-01 20 chr1:129004443-129004462 9.28e-03 [-15(9.09e-05)]_1_[+6(8.68e-07)] chr1:129013405-129013424 7.14e-01 20 chr1:129129973-129129992 4.02e-02 9_[+6(8.68e-07)] chr1:142226894-142226913 1.79e-01 9_[+6(8.68e-07)] chr1:142250559-142250578 7.93e-01 20 chr1:142257373-142257392 9.79e-01 20 chr1:142258620-142258639 9.64e-04 5_[+11(1.29e-07)] chr1:142271050-142271069 2.24e-03 [+4(2.70e-08)]_5 chr1:142277407-142277426 3.49e-01 20 chr1:142293344-142293363 7.93e-01 20 chr1:142303400-142303419 3.38e-01 20 chr1:142602114-142602133 7.93e-01 20 chr1:143143893-143143912 3.16e-01 20 chr1:143420180-143420199 2.03e-02 20 chr1:143423837-143423862 3.65e-01 26 chr1:143436223-143436242 2.24e-03 3_[-4(2.70e-08)]_2 chr1:143448653-143448672 9.64e-04 [-11(1.29e-07)]_5 chr1:143449902-143449921 9.79e-01 20 chr1:143456726-143456745 7.76e-01 20 chr1:143494314-143494344 9.13e-01 31 chr1:143500877-143500896 3.76e-01 20 chr1:143503300-143503319 4.42e-02 20 chr1:143521505-143521524 9.54e-02 2_[+14(2.65e-05)]_10 chr1:143604474-143604493 1.04e-01 20 chr1:143645816-143645853 8.18e-05 9_[-7(1.22e-05)]_18 chr1:143652353-143652372 5.02e-01 20 chr1:143672708-143672727 4.81e-01 20 chr1:143710246-143710265 7.76e-01 20 chr1:143717068-143717087 9.79e-01 20 chr1:143718316-143718335 9.64e-04 5_[+11(1.29e-07)] chr1:143730746-143730765 6.60e-03 [+4(2.70e-08)]_5 chr1:143743506-143743525 3.36e-02 20 chr1:143747163-143747182 2.03e-02 20 chr1:144013684-144013703 3.16e-01 20 chr1:144040665-144040684 3.07e-03 [-4(8.61e-05)]_5 chr1:145181308-145181327 9.45e-01 20 chr1:145662090-145662109 4.72e-01 20 chr1:145720824-145720843 7.59e-01 20 chr1:145762002-145762021 1.04e-01 20 chr1:145828295-145828314 1.08e-01 7_[+15(4.49e-05)]_5 chr1:160735608-160735627 2.94e-02 20 chr1:160880564-160880583 8.92e-01 20 chr1:160962362-160962381 8.92e-01 20 chr1:161022719-161022738 8.88e-01 20 chr2:89127360-89127379 5.07e-01 20 chr2:89417200-89417220 6.32e-02 21 chr2:89422052-89422091 6.82e-01 40 chr2:89432117-89432136 3.25e-01 20 chr2:89438430-89438449 1.23e-01 20 chr2:89438469-89438488 1.75e-01 20 chr2:89486113-89486132 3.24e-03 1_[-4(5.06e-06)]_4 chr2:89515232-89515260 3.67e-01 29 chr2:89593169-89593188 2.57e-01 20 chr2:89593482-89593501 2.87e-01 20 chr2:89593526-89593545 3.03e-01 20 chr2:89683047-89683066 4.73e-02 9_[-6(5.56e-05)] chr2:89704881-89704900 2.19e-01 20 chr2:89789718-89789737 5.45e-01 20 chr2:89795800-89795819 2.83e-02 4_[+9(1.59e-07)]_1 chr2:89807689-89807708 7.08e-02 2_[+8(4.79e-05)]_3 chr2:89811512-89811531 2.13e-01 20 chr2:89841333-89841364 5.44e-02 10_[+6(9.12e-06)]_11 chr2:89859895-89859915 8.76e-01 21 chr2:89889869-89889888 2.13e-01 20 chr2:89905578-89905597 1.49e-02 3_[-9(1.59e-07)]_2 chr2:89911658-89911677 2.31e-01 [-5(4.43e-05)]_5 chr2:90036522-90036541 2.23e-01 20 chr2:90058307-90058326 4.73e-02 [+6(5.56e-05)]_9 chr2:90147791-90147810 9.44e-01 20 chr2:90147838-90147857 7.21e-02 6_[+7(2.26e-05)]_3 chr2:90148161-90148180 2.57e-01 20 chr2:90226094-90226122 3.67e-01 29 chr2:90255328-90255347 3.24e-03 4_[+4(5.06e-06)]_1 chr2:90302942-90302969 2.09e-01 28 chr2:90309299-90309318 3.25e-01 20 chr2:90319351-90319408 1.51e-01 34_[-8(7.51e-05)]_9 chr2:90324196-90324218 5.84e-02 23 chr2:90619230-90619249 4.34e-01 20 chr2:90633304-90633323 6.55e-01 20 chr2:90644295-90644314 1.76e-01 20 chr2:90661643-90661662 5.99e-01 20 chr2:90711599-90711618 3.88e-01 20 chr2:90717408-90717427 1.83e-01 20 chr2:90798226-90798245 2.59e-01 20 chr2:90801269-90801288 1.50e-02 20 chr2:90801859-90801878 4.73e-02 9_[-6(5.56e-05)] chr2:90823650-90823669 2.19e-01 20 chr2:90843359-90843378 2.85e-01 20 chr2:90846272-90846291 4.98e-02 [-10(7.41e-05)]_12 chr2:90849527-90849546 3.23e-01 20 chr2:90863497-90863516 3.23e-01 20 chr2:90908098-90908117 1.98e-02 10_[-10(9.44e-06)]_2 chr2:90909273-90909292 6.46e-01 20 chr2:90941490-90941513 2.40e-01 9_[+5(4.43e-05)] chr2:90947565-90947584 2.83e-02 4_[+9(1.59e-07)]_1 chr2:90963230-90963249 2.13e-01 20 chr2:90993989-90994008 7.51e-01 20 chr2:90997354-90997373 2.86e-01 20 chr2:91015193-91015212 5.32e-01 20 chr2:91017307-91017326 3.14e-01 20 chr2:91556442-91556461 4.57e-01 20 chr2:91602084-91602103 2.75e-01 20 chr2:91602648-91602667 9.80e-02 8_[-6(3.11e-05)]_1 chr2:91607741-91607760 7.57e-01 20 chr2:91637630-91637649 2.13e-01 20 chr2:91653335-91653354 1.49e-02 3_[-9(1.59e-07)]_2 chr2:91659415-91659438 2.40e-01 [-5(4.43e-05)]_9 chr2:91729321-91729340 2.23e-01 20 chr2:91751512-91751531 4.73e-02 [+6(5.56e-05)]_9 chr2:91752100-91752119 1.50e-02 20 chr2:91755088-91755107 2.59e-01 20 chr2:91849654-91849673 7.51e-02 20 chr2:91849709-91849728 7.21e-02 6_[+7(2.26e-05)]_3 chr2:91849986-91850005 2.57e-01 20 chr2:91927784-91927803 4.67e-01 20 chr2:91972460-91972479 3.26e-01 20 chr2:91988183-91988202 1.49e-02 3_[-9(1.59e-07)]_2 chr2:91994295-91994314 3.32e-01 20 chr2:92029537-92029556 1.49e-03 12_[+12(6.69e-05)] chr2:92041756-92041776 6.20e-01 21 chr2:92063577-92063596 5.60e-04 6_[-7(3.37e-06)]_3 chr2:92106996-92107015 2.86e-01 20 chr2:92184441-92184490 4.69e-01 50 chr2:92191990-92192009 2.32e-01 20 chr2:92202558-92202620 1.40e-02 44_[-8(1.46e-05)]_4 chr2:92237844-92237863 3.32e-01 20 chr2:92243959-92243978 2.83e-02 4_[+9(1.59e-07)]_1 chr2:92263494-92263515 3.11e-01 22 chr2:94653434-94653453 2.61e-01 9_[-6(2.14e-05)] chr2:94658536-94658555 2.61e-01 9_[-6(2.14e-05)] chr2:94711867-94711886 1.79e-01 20 chr2:94715530-94715549 3.94e-01 20 chr2:94737293-94737313 3.05e-01 2_[+14(2.65e-05)]_11 chr2:94749424-94749443 1.07e-02 [-10(4.58e-05)]_1_[-12(6.69e-05)]_3 chr2:94783732-94783751 2.79e-01 20 chr2:94789839-94789858 1.49e-02 2_[+9(1.59e-07)]_3 chr2:94805504-94805523 2.13e-01 20 chr2:94852373-94852398 8.46e-01 26 chr2:94890646-94890665 2.13e-01 20 chr2:94906311-94906330 1.49e-02 3_[-9(1.59e-07)]_2 chr2:94912420-94912439 2.79e-01 20 chr2:94946986-94947005 1.07e-02 3_[+12(6.69e-05)]_1_[+10(4.58e-05)] chr2:94959113-94959133 3.05e-01 11_[-14(2.65e-05)]_2 chr2:94980872-94980891 3.94e-01 20 chr2:94984547-94984566 1.79e-01 20 chr2:95014419-95014438 3.66e-01 2_[+15(9.09e-05)]_10 chr2:96250795-96250814 9.50e-01 20 chr2:96373915-96373951 4.49e-01 37 chr2:96379958-96379977 8.87e-02 20 chr2:96380195-96380214 2.25e-02 20 chr2:96386430-96386449 2.38e-02 20 chr2:96402193-96402212 7.65e-01 20 chr2:96409670-96409689 2.29e-01 20 chr2:96530975-96531019 3.26e-01 8_[-2(9.42e-05)]_22 chr2:96586345-96586364 3.90e-01 20 chr2:97587617-97587636 1.93e-02 3_[-7(8.52e-05)]_6 chr2:97675547-97675566 4.64e-01 20 chr2:97806150-97806169 1.42e-03 4_[+7(8.52e-05)]_5 chr2:97867068-97867087 7.44e-02 20 chr2:97915589-97915608 1.42e-03 5_[-7(8.52e-05)]_4 chr2:98024063-98024082 2.49e-02 10_[+12(4.76e-05)]_2 chr3:95754003-95754022 1.01e-02 5_[-5(1.91e-07)] chr3:95760594-95760613 4.87e-06 [+1(3.99e-10)]_5 chr3:95767201-95767220 4.87e-06 [+1(3.99e-10)]_5 chr3:95813208-95813227 9.32e-02 20 chr3:95826297-95826316 2.40e-02 20 chr3:95826889-95826908 5.04e-02 20 chr3:95831848-95831867 9.32e-02 20 chr3:95833195-95833214 5.04e-02 20 chr3:95851368-95851387 2.40e-02 20 chr3:95863992-95864011 2.62e-01 20 chr3:95870843-95870862 3.81e-01 20 chr3:95876625-95876644 3.81e-01 20 chr3:95879516-95879535 3.81e-01 20 chr3:198348937-198348956 8.01e-01 20 chr3:198363648-198363667 2.36e-01 20 chr3:198410488-198410507 8.01e-01 20 chr3:198423106-198423125 9.32e-01 20 chr3:198540539-198540558 5.99e-01 20 chr3:198542793-198542812 4.13e-01 20 chr3:198655867-198655886 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chr13:5265546-5265565 6.92e-04 3_[+1(1.80e-07)]_2 chr13:5266787-5266806 5.38e-01 20 chr13:5281372-5281391 8.85e-01 20 chr13:5320611-5320630 1.19e-01 [-9(4.12e-05)]_5 chr13:5331068-5331087 2.90e-01 5_[+9(7.48e-05)] chr13:5338388-5338417 3.53e-02 30 chr13:5342479-5342498 4.87e-06 [+1(3.99e-10)]_5 chr13:5344096-5344115 7.16e-02 [+7(1.62e-05)]_9 chr13:5344723-5344742 2.38e-01 20 chr13:5348797-5348816 4.87e-06 [+1(3.99e-10)]_5 chr13:5371545-5371564 5.41e-01 20 chr13:5424586-5424605 4.37e-01 [-4(6.57e-05)]_5 chr13:5436580-5436625 2.41e-03 15_[-4(1.57e-08)]_16 chr13:5666907-5666926 9.64e-01 20 chr13:5670083-5670128 7.06e-01 46 chr13:5756290-5756309 6.72e-01 20 chr13:5770609-5770628 3.53e-02 20 chr13:9833772-9833791 3.72e-03 4_[+1(4.70e-07)]_1 chr13:9870687-9870706 1.51e-02 4_[-4(8.61e-05)]_1 chr13:9880125-9880144 3.72e-03 4_[+1(4.70e-07)]_1 chr13:9915399-9915418 1.51e-02 4_[-4(8.61e-05)]_1 chr13:9925011-9925030 2.07e-02 4_[+1(1.90e-05)]_1 chr13:9964654-9964673 1.51e-02 4_[-4(8.61e-05)]_1 chr13:9974261-9974280 7.42e-03 2_[+1(5.52e-06)]_3 chr13:9974822-9974841 8.21e-01 20 chr13:9982797-9982816 1.33e-01 20 chr13:10010629-10010648 1.51e-02 4_[-4(8.61e-05)]_1 chr13:10020223-10020242 3.72e-03 4_[+1(4.70e-07)]_1 chr13:10020799-10020839 5.09e-02 30_[-7(4.01e-05)] chr13:10026416-10026435 2.85e-01 20 chr13:10028212-10028231 3.26e-04 5_[-1(1.44e-06)] chr13:10074193-10074212 1.22e-01 20 chr13:10075326-10075345 7.75e-01 20 chr13:10077435-10077454 6.65e-02 20 chr13:10081023-10081042 1.24e-02 [+8(2.17e-06)]_5 chr13:10084777-10084796 7.23e-01 20 chr13:10098035-10098054 7.96e-02 6_[+3(6.64e-06)] chr13:10105360-10105379 2.89e-01 [-9(7.48e-05)]_5 chr13:10158473-10158492 6.92e-04 2_[-1(1.80e-07)]_3 chr13:10180811-10180830 2.41e-01 20 chr13:10193826-10193845 1.31e-04 5_[-8(1.53e-07)] chr13:10281606-10281625 9.13e-02 20 chr13:10282915-10282934 2.61e-01 7_[-6(9.36e-05)]_2 chr13:10556964-10556983 5.45e-01 20 chr13:10586704-10586747 4.33e-01 44 chr13:10597966-10597985 5.60e-01 2_[+11(1.70e-05)]_3 chr13:10597997-10598016 8.44e-01 20 chr13:10598703-10598722 6.75e-04 6_[-10(5.52e-05)]_6 chr13:10603940-10603959 1.57e-02 20 chr13:10610519-10610538 3.21e-01 20 chr13:10648967-10648986 2.02e-01 20 chr13:10654977-10654996 6.67e-02 7_[+12(9.44e-06)]_5 chr13:10655216-10655235 6.83e-03 20 chr13:10660691-10660710 2.38e-02 20 chr13:10686040-10686059 1.99e-01 20 chr13:10705767-10705786 8.55e-01 20 chr13:10838741-10838760 4.44e-01 20 chr13:11080047-11080066 3.81e-02 3_[-6(2.76e-05)]_6 chr13:11093100-11093119 2.05e-01 20 chr13:11098443-11098466 8.24e-01 24 chr13:11104800-11104819 6.45e-01 20 chr13:11117863-11117882 4.90e-01 20 chr13:11121622-11121641 1.24e-02 5_[-8(2.17e-06)] chr13:11125234-11125253 3.29e-05 [-8(8.27e-06)]_5 chr13:11128309-11128349 1.98e-06 5_[-5(1.91e-07)]_21 chr13:11130406-11130425 2.38e-01 20 chr13:11134495-11134514 8.24e-01 20 chr13:11136091-11136110 2.18e-01 20 chr13:11140311-11140330 2.38e-01 20 chr13:11141082-11141101 2.18e-01 20 chr13:11156660-11156679 1.07e-01 20 chr13:11186117-11186136 6.92e-04 2_[-1(1.80e-07)]_3 chr13:11211272-11211291 7.15e-01 20 chr13:11229306-11229325 1.31e-04 5_[-8(1.53e-07)] chr13:11313554-11313573 1.81e-03 2_[-6(3.09e-07)]_7 chr13:11374236-11374255 2.55e-01 1_[-6(4.00e-05)]_8 chr13:11421988-11422007 9.22e-01 20 chr13:11430254-11430273 8.99e-01 20 chr13:11476106-11476125 8.74e-01 20 chr13:11587621-11587651 4.90e-01 31 chr13:11588009-11588028 4.09e-03 1_[-4(2.25e-06)]_4 chr13:11590320-11590339 1.49e-01 20 chr13:11594141-11594160 1.23e-01 20 chr13:11599350-11599369 2.47e-01 20 chr13:11600092-11600112 3.88e-03 5_[+8(2.61e-05)]_1 chr13:11611398-11611417 7.98e-01 20 chr13:11611452-11611471 1.17e-02 2_[+4(6.57e-05)]_3 chr13:11643201-11643220 9.86e-01 20 chr13:11670830-11670849 1.14e-02 3_[+9(6.92e-08)]_2 chr13:11690466-11690485 1.15e-01 20 chr13:11693326-11693345 5.77e-02 20 chr13:11721122-11721141 9.89e-02 20 chr13:11732447-11732466 2.79e-02 3_[+9(1.09e-06)]_2 chr13:11743410-11743429 4.57e-02 8_[-6(3.09e-07)]_1 chr13:12098575-12098594 2.90e-02 5_[-6(3.09e-07)]_4 chr13:12162984-12163003 9.82e-01 20 chr13:12166718-12166737 2.99e-02 4_[+13(2.36e-06)]_5 chr13:12320399-12320418 1.56e-01 20 chr13:12410294-12410313 8.06e-01 20 chr13:12757190-12757209 6.76e-01 20 chr13:12758199-12758218 3.99e-03 5_[+4(1.15e-07)] chr13:12975657-12975676 6.75e-01 20 chr13:13394524-13394543 6.29e-01 20 chr13:13469979-13469998 1.10e-01 [+7(5.95e-05)]_9 chr13:13473559-13473611 4.17e-02 4_[-7(5.50e-06)]_15_[-14(6.28e-05)]_\ 15 chr13:13477046-13477065 7.60e-02 20 chr13:13480422-13480441 6.23e-01 20 chr13:13481631-13481650 8.13e-01 20 chr13:13484500-13484519 5.15e-02 20 chr13:13637141-13637160 2.10e-02 5_[-13(2.36e-06)]_4 chr13:13640946-13640965 8.02e-03 20 chr13:13711185-13711204 2.54e-01 20 chr13:14117150-14117169 1.69e-01 20 chr13:14254066-14254085 4.58e-01 20 chr13:14261270-14261313 7.12e-03 29_[-13(9.68e-05)]_4 chr13:14266483-14266520 8.27e-01 38 chr13:14425421-14425440 8.55e-01 20 chr13:14562931-14562950 8.74e-01 20 chr13:14601323-14601342 1.58e-01 4_[+11(3.90e-05)]_1 chr13:14614577-14614596 9.39e-01 20 chr14:2538-2557 1.76e-01 3_[-1(9.78e-06)]_2 chr14:9462-9481 5.92e-02 5_[-3(2.15e-06)]_1 chr14:12849-12868 1.64e-05 5_[-2(4.18e-08)] chr14:14160-14180 2.37e-06 6_[-1(7.99e-10)] chr14:15735-15754 5.92e-02 5_[-3(2.15e-06)]_1 chr14:19129-19148 1.64e-05 5_[-2(4.18e-08)] chr14:20440-20460 2.37e-06 6_[-1(7.99e-10)] chr14:22023-22042 5.92e-02 5_[-3(2.15e-06)]_1 chr14:22673-22692 5.86e-01 20 chr14:25417-25436 9.98e-05 5_[-2(4.18e-08)] chr14:26728-26748 2.37e-06 6_[-1(7.99e-10)] chr14:28303-28322 5.92e-02 5_[-3(2.15e-06)]_1 chr14:28953-28972 5.86e-01 20 chr14:31697-31716 9.98e-05 5_[-2(4.18e-08)] chr14:33008-33028 2.37e-06 6_[-1(7.99e-10)] chr14:34583-34602 5.92e-02 5_[-3(2.15e-06)]_1 chr14:37977-37996 9.98e-05 5_[-2(4.18e-08)] chr14:39288-39308 2.37e-06 6_[-1(7.99e-10)] chr14:40863-40882 5.92e-02 5_[-3(2.15e-06)]_1 chr14:44257-44276 9.98e-05 5_[-2(4.18e-08)] chr14:45568-45588 2.37e-06 6_[-1(7.99e-10)] chr14:47143-47162 5.92e-02 5_[-3(2.15e-06)]_1 chr14:50537-50556 1.64e-05 5_[-2(4.18e-08)] chr14:51848-51868 2.37e-06 6_[-1(7.99e-10)] chr14:53423-53442 5.92e-02 5_[-3(2.15e-06)]_1 chr14:54073-54092 5.86e-01 20 chr14:56817-56836 9.98e-05 5_[-2(4.18e-08)] chr14:58128-58148 2.37e-06 6_[-1(7.99e-10)] chr14:59703-59722 5.92e-02 5_[-3(2.15e-06)]_1 chr14:60353-60372 5.86e-01 20 chr14:63095-63114 9.98e-05 5_[-2(4.18e-08)] chr14:64406-64426 2.37e-06 6_[-1(7.99e-10)] chr14:65981-66000 5.92e-02 5_[-3(2.15e-06)]_1 chr14:69322-69341 1.76e-01 20 chr14:69375-69394 9.98e-05 5_[-2(4.18e-08)] chr14:70686-70706 2.37e-06 6_[-1(7.99e-10)] chr14:72261-72280 5.92e-02 5_[-3(2.15e-06)]_1 chr14:75655-75674 1.64e-05 5_[-2(4.18e-08)] chr14:75896-75915 3.87e-01 20 chr14:76966-76986 2.37e-06 6_[-1(7.99e-10)] chr14:78549-78568 5.92e-02 5_[-3(2.15e-06)]_1 chr14:79199-79218 5.86e-01 20 chr14:81943-81962 9.98e-05 5_[-2(4.18e-08)] chr14:83254-83274 2.37e-06 6_[-1(7.99e-10)] chr14:84829-84848 5.92e-02 5_[-3(2.15e-06)]_1 chr14:88223-88242 9.98e-05 5_[-2(4.18e-08)] chr14:89534-89554 2.37e-06 6_[-1(7.99e-10)] chr14:91109-91128 5.92e-02 5_[-3(2.15e-06)]_1 chr14:94503-94522 9.98e-05 5_[-2(4.18e-08)] chr14:95814-95834 2.37e-06 6_[-1(7.99e-10)] chr14:97389-97408 5.92e-02 5_[-3(2.15e-06)]_1 chr14:100783-100802 9.98e-05 5_[-2(4.18e-08)] chr14:102094-102114 2.37e-06 6_[-1(7.99e-10)] chr14:103669-103688 5.92e-02 5_[-3(2.15e-06)]_1 chr14:107062-107081 9.98e-05 5_[-2(4.18e-08)] chr14:108373-108393 2.37e-06 6_[-1(7.99e-10)] chr14:109948-109967 5.92e-02 5_[-3(2.15e-06)]_1 chr14:113341-113360 9.98e-05 5_[-2(4.18e-08)] chr14:114652-114672 2.37e-06 6_[-1(7.99e-10)] chr14:116227-116246 5.92e-02 5_[-3(2.15e-06)]_1 chr14:119620-119639 9.98e-05 5_[-2(4.18e-08)] chr14:120931-120951 2.37e-06 6_[-1(7.99e-10)] chr14:122506-122525 5.92e-02 5_[-3(2.15e-06)]_1 chr14:125898-125917 9.98e-05 5_[-2(4.18e-08)] chr14:127209-127229 2.37e-06 6_[-1(7.99e-10)] chr14:128780-128799 5.92e-02 5_[-3(2.15e-06)]_1 chr14:132171-132190 1.64e-05 5_[-2(4.18e-08)] chr14:133482-133502 2.37e-06 6_[-1(7.99e-10)] chr14:135064-135083 5.92e-02 5_[-3(2.15e-06)]_1 chr14:138459-138478 1.64e-05 5_[-2(4.18e-08)] chr14:139770-139790 2.37e-06 6_[-1(7.99e-10)] chr14:141344-141363 5.92e-02 5_[-3(2.15e-06)]_1 chr14:144735-144754 9.98e-05 5_[-2(4.18e-08)] chr14:146046-146066 2.37e-06 6_[-1(7.99e-10)] chr14:147620-147639 5.92e-02 5_[-3(2.15e-06)]_1 chr14:151011-151030 1.64e-05 5_[-2(4.18e-08)] chr14:152320-152342 4.35e-04 8_[-1(8.29e-09)] chr14:153893-153912 5.92e-02 5_[-3(2.15e-06)]_1 chr14:157126-157145 3.99e-02 9_[-7(2.47e-05)] chr14:157284-157303 9.98e-05 5_[-2(4.18e-08)] chr14:158595-158615 2.37e-06 6_[-1(7.99e-10)] chr14:160184-160203 5.92e-02 5_[-3(2.15e-06)]_1 chr14:163220-163239 1.07e-04 5_[+5(2.72e-06)] chr14:163579-163598 9.98e-05 5_[-2(4.18e-08)] chr14:164862-164910 1.89e-04 34_[-1(3.99e-10)] chr14:166476-166495 5.92e-02 5_[-3(2.15e-06)]_1 chr14:169867-169886 9.98e-05 5_[-2(4.18e-08)] chr14:171178-171198 8.80e-06 6_[-1(3.99e-10)] chr14:172768-172787 5.92e-02 5_[-3(2.15e-06)]_1 chr14:175808-175827 1.07e-04 5_[+5(2.72e-06)] chr14:176167-176186 9.98e-05 5_[-2(4.18e-08)] chr14:177478-177498 8.80e-06 6_[-1(3.99e-10)] chr14:179069-179088 5.92e-02 5_[-3(2.15e-06)]_1 chr14:182109-182128 1.07e-04 5_[+5(2.72e-06)] chr14:182468-182487 9.98e-05 5_[-2(4.18e-08)] chr14:183779-183799 8.80e-06 6_[-1(3.99e-10)] chr14:185358-185377 5.92e-02 5_[-3(2.15e-06)]_1 chr14:188394-188413 1.07e-04 5_[+5(2.72e-06)] chr14:188753-188772 1.67e-05 5_[-2(4.18e-08)] chr14:190064-190084 2.37e-06 6_[-1(7.99e-10)] chr14:191646-191665 5.92e-02 5_[-3(2.15e-06)]_1 chr14:195041-195060 1.64e-05 5_[-2(4.18e-08)] chr14:196352-196372 2.37e-06 6_[-1(7.99e-10)] chr14:197926-197945 5.92e-02 5_[-3(2.15e-06)]_1 chr14:200958-200977 1.07e-04 5_[+5(2.72e-06)] chr14:201317-201336 9.98e-05 5_[-2(4.18e-08)] chr14:202628-202648 2.37e-06 6_[-1(7.99e-10)] chr14:204202-204221 5.92e-02 5_[-3(2.15e-06)]_1 chr14:207234-207253 1.07e-04 5_[+5(2.72e-06)] chr14:207593-207612 1.64e-05 5_[-2(4.18e-08)] chr14:208902-208924 4.35e-04 8_[-1(8.29e-09)] chr14:210475-210494 5.92e-02 5_[-3(2.15e-06)]_1 chr14:213507-213526 1.07e-04 5_[+5(2.72e-06)] chr14:213708-213727 3.99e-02 9_[-7(2.47e-05)] chr14:213866-213885 9.98e-05 5_[-2(4.18e-08)] chr14:215177-215197 8.80e-06 6_[-1(3.99e-10)] chr14:216762-216781 5.92e-02 5_[-3(2.15e-06)]_1 chr14:219798-219817 1.07e-04 5_[+5(2.72e-06)] chr14:220450-220469 1.31e-01 20 chr14:221440-221488 1.89e-04 34_[-1(3.99e-10)] chr14:226090-226121 1.14e-01 32 chr14:261031-261050 2.95e-01 20 chr14:634743-634764 4.79e-01 22 chr14:641223-641242 4.69e-03 11_[-10(1.89e-05)]_1 chr14:669523-669542 1.76e-03 5_[-8(7.84e-07)] chr14:677114-677133 1.13e-02 4_[+13(5.80e-05)]_5 chr14:749573-749592 1.21e-02 20 chr14:749894-749913 2.59e-02 4_[-6(4.28e-05)]_5 chr14:1517570-1517589 1.13e-02 5_[-13(5.80e-05)]_4 chr14:1525147-1525166 6.96e-05 [+8(1.53e-07)]_5 chr14:1566422-1566443 2.11e-04 3_[+1(1.80e-07)]_4 chr14:1567663-1567683 6.30e-01 21 chr14:1573105-1573124 3.94e-01 20 chr14:1581993-1582012 4.69e-03 1_[+10(1.89e-05)]_11 chr14:1588490-1588509 1.96e-01 20 chr14:1588643-1588662 6.08e-01 20 chr14:1621472-1621491 1.19e-01 [-9(4.12e-05)]_5 chr14:1640066-1640085 4.43e-01 20 chr14:1652623-1652642 4.90e-01 20 chr14:1656374-1656393 1.24e-02 5_[-8(2.17e-06)] chr14:1658480-1658499 3.03e-01 20 chr14:1659961-1660009 2.92e-05 18_[-7(5.50e-06)]_[-8(3.46e-06)]_5 chr14:1663241-1663263 1.85e-03 5_[-5(6.52e-07)]_3 chr14:1664711-1664730 2.61e-01 20 chr14:1683947-1683966 5.41e-01 20 chr14:1696413-1696432 9.28e-03 1_[+5(1.34e-05)]_4 chr14:1768400-1768441 7.99e-03 15_[-4(1.57e-08)]_12 chr14:1999672-1999713 5.95e-01 42 chr14:2085694-2085713 6.72e-01 20 chr14:2100007-2100026 3.53e-02 20 chr14:2787888-2787907 3.90e-01 20 chr14:2821300-2821319 1.51e-02 4_[-4(8.61e-05)]_1 chr14:2832052-2832071 3.90e-01 20 chr14:2865449-2865468 1.51e-02 4_[-4(8.61e-05)]_1 chr14:2875555-2875574 2.99e-02 9_[-7(4.01e-05)] chr14:2877016-2877040 1.79e-01 10_[-1(6.27e-05)] chr14:2882699-2882718 9.15e-01 20 chr14:2885740-2885759 5.01e-01 20 chr14:2894077-2894096 1.49e-02 5_[+9(5.73e-06)] chr14:2930382-2930403 8.47e-02 22 chr14:2931514-2931533 7.75e-01 20 chr14:2932327-2932346 7.93e-01 20 chr14:2933387-2933406 8.11e-02 20 chr14:2933618-2933637 6.47e-03 5_[+8(1.63e-05)] chr14:2935081-2935100 3.03e-01 20 chr14:2937191-2937210 1.24e-02 [+8(2.17e-06)]_5 chr14:2953437-2953456 2.36e-01 20 chr14:3014769-3014793 7.81e-05 7_[-1(1.80e-07)]_3 chr14:3036246-3036265 1.55e-01 20 chr14:3053460-3053479 1.31e-04 5_[-8(1.53e-07)] chr14:3061055-3061074 4.79e-02 20 chr14:3142470-3142489 1.32e-02 [-6(2.76e-05)]_9 chr14:3143292-3143311 3.20e-04 9_[-6(2.12e-06)] chr14:3143361-3143380 8.65e-02 5_[-6(5.56e-05)]_4 chr14:3411926-3411945 5.26e-03 5_[-6(2.12e-06)]_4 chr14:3451883-3451905 7.27e-01 23 chr14:3463161-3463180 2.79e-01 20 chr14:3463195-3463214 8.44e-01 20 chr14:3493369-3493388 4.64e-01 20 chr14:3514135-3514154 2.02e-01 20 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1.23e-01 20 chr14:7296265-7296285 3.56e-01 21 chr14:7639385-7639404 7.42e-01 20 chr14:7671739-7671758 8.06e-01 20 chr14:7761726-7761745 1.56e-01 20 chr14:7792251-7792270 1.97e-01 20 chr14:7912269-7912288 8.29e-01 20 chr14:7915482-7915501 2.99e-02 5_[-13(2.36e-06)]_4 chr14:7919220-7919239 9.82e-01 20 chr14:7960060-7960079 6.27e-01 20 chr14:8344902-8344921 1.74e-02 3_[+6(3.09e-07)]_6 chr14:8372890-8372909 4.57e-02 1_[+6(3.09e-07)]_8 chr14:8383849-8383868 2.79e-02 2_[-9(1.09e-06)]_3 chr14:8395155-8395174 3.60e-02 20 chr14:8397963-8397982 1.61e-03 20 chr14:8422665-8422684 8.29e-01 20 chr14:8493102-8493121 2.36e-01 20 chr14:8495631-8495650 8.98e-03 6_[+6(4.00e-05)]_3 chr14:8511959-8511978 1.48e-03 [-11(3.38e-07)]_5 chr14:8524183-8524202 2.79e-02 2_[-9(1.09e-06)]_3 chr14:8673994-8674013 1.48e-03 2_[+9(1.88e-06)]_3 chr14:8686224-8686243 1.48e-03 5_[+11(3.38e-07)] chr14:8706823-8706842 4.65e-04 20 chr14:8777261-8777280 3.43e-01 20 chr14:8786088-8786107 9.53e-01 20 chr14:8807668-8807687 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5.99e-03 2_[-4(5.78e-06)]_3 chr15:249466-249485 4.45e-01 20 chr15:250027-250046 8.13e-01 20 chr15:251055-251074 8.60e-03 20 chr15:340675-340694 7.58e-01 20 chr15:342506-342525 9.08e-03 6_[-6(8.68e-07)]_3 chr15:1533871-1533890 4.75e-01 20 chr15:1644072-1644091 4.69e-04 5_[-8(1.63e-05)] chr15:1777300-1777319 1.38e-02 20 chr15:1832368-1832387 1.19e-01 [-9(4.12e-05)]_5 chr15:1867267-1867286 1.24e-02 5_[-8(2.17e-06)] chr15:1870889-1870908 2.97e-01 20 chr15:1874213-1874235 4.91e-03 5_[-5(1.91e-07)]_3 chr15:1880359-1880378 4.87e-06 [+1(3.99e-10)]_5 chr15:1884662-1884681 6.60e-05 [+5(4.93e-08)]_5 chr15:1891293-1891312 6.60e-05 [+5(4.93e-08)]_5 chr15:1897622-1897641 6.60e-05 [+5(4.93e-08)]_5 chr15:1904247-1904266 6.60e-05 [+5(4.93e-08)]_5 chr15:1906278-1906297 4.87e-06 [+1(3.99e-10)]_5 chr15:1910579-1910598 6.60e-05 [+5(4.93e-08)]_5 chr15:1917128-1917147 6.60e-05 [+5(4.93e-08)]_5 chr15:1923724-1923743 6.60e-05 [+5(4.93e-08)]_5 chr15:1930320-1930339 6.60e-05 [+5(4.93e-08)]_5 chr15:1936916-1936935 6.60e-05 [+5(4.93e-08)]_5 chr15:1943216-1943235 6.60e-05 [+5(4.93e-08)]_5 chr15:1949519-1949538 6.60e-05 [+5(4.93e-08)]_5 chr15:1955818-1955837 3.74e-03 [+5(1.34e-05)]_5 chr15:1962130-1962149 6.60e-05 [+5(4.93e-08)]_5 chr15:1964195-1964214 5.29e-02 2_[+2(1.11e-06)]_3 chr15:1968433-1968452 6.60e-05 [+5(4.93e-08)]_5 chr15:1970498-1970517 5.29e-02 2_[+2(1.11e-06)]_3 chr15:1974736-1974755 6.60e-05 [+5(4.93e-08)]_5 chr15:1976809-1976828 5.29e-02 2_[+2(1.11e-06)]_3 chr15:1983404-1983423 5.29e-02 2_[+2(1.11e-06)]_3 chr15:1989990-1990009 5.29e-02 2_[+2(1.11e-06)]_3 chr15:1996582-1996601 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2003204-2003223 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2009786-2009805 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2016368-2016387 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2022950-2022969 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2029532-2029551 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2036130-2036149 5.29e-02 2_[+2(1.11e-06)]_3 chr15:2042712-2042731 5.29e-02 2_[+2(1.11e-06)]_3 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20 chr22:10563172-10563191 6.92e-04 3_[+1(1.80e-07)]_2 chr22:10571574-10571593 3.56e-02 3_[-4(2.02e-05)]_2 chr22:10592673-10592692 1.07e-01 20 chr22:10606843-10606862 4.69e-03 1_[+10(1.89e-05)]_11 chr22:10613495-10613518 3.46e-01 24 chr22:10646298-10646317 1.19e-01 [-9(4.12e-05)]_5 chr22:10652563-10652582 7.09e-01 20 chr22:10687877-10687897 2.02e-02 5_[-5(1.95e-06)]_1 chr22:10689494-10689513 3.64e-02 [+7(5.18e-06)]_9 chr22:10693925-10693958 3.30e-02 7_[-1(3.11e-05)]_12 chr22:10701609-10701628 6.92e-04 2_[-1(1.80e-07)]_3 chr22:10703812-10703831 8.17e-01 20 chr22:10711670-10711689 1.04e-03 5_[-7(8.73e-06)]_4 chr22:10742150-10742169 2.03e-02 5_[-8(3.41e-05)] chr22:10745554-10745573 1.64e-02 6_[+6(2.76e-05)]_3 chr22:10746056-10746075 8.58e-01 20 chr22:11075430-11075449 8.74e-01 20 chr22:11119217-11119236 1.38e-02 20 chr22:11144157-11144176 8.17e-03 1_[+4(6.56e-06)]_4 chr22:11184806-11184836 4.90e-01 31 chr22:11185194-11185213 4.09e-03 1_[-4(2.25e-06)]_4 chr22:11187506-11187525 1.49e-01 20 chr22:11197287-11197307 3.88e-03 5_[+8(2.61e-05)]_1 chr22:11208599-11208618 7.98e-01 20 chr22:11208653-11208672 1.17e-02 2_[+4(6.57e-05)]_3 chr22:11263564-11263583 1.72e-01 [-8(1.80e-05)]_5 chr22:11279472-11279491 1.28e-02 2_[+8(4.59e-06)]_3 chr22:11287203-11287232 3.86e-04 10_[+4(1.45e-05)]_5 chr22:11290051-11290070 2.48e-02 1_[+7(8.52e-05)]_8 chr22:11309935-11309969 1.84e-02 [-15(9.09e-05)]_6_[+6(3.09e-07)]_10 chr22:11311925-11311944 1.26e-02 20 chr22:11311974-11311993 6.33e-02 20 chr22:11381967-11381986 4.73e-02 [+6(5.56e-05)]_9 chr22:11446070-11446089 4.56e-01 20 chr22:11463865-11463887 3.23e-03 5_[+11(3.38e-07)]_3 chr22:11476049-11476070 5.74e-02 22 chr22:11484507-11484526 4.65e-04 20 chr22:11563172-11563191 9.53e-01 20 chr22:11576661-11576681 1.03e-02 [+4(2.70e-08)]_6 chr22:11581841-11581860 9.74e-02 7_[-6(4.00e-05)]_2 chr22:11581934-11581953 7.61e-03 7_[-6(4.00e-05)]_2 chr22:11584757-11584776 1.54e-01 20 chr22:11590545-11590564 1.72e-01 [-8(1.80e-05)]_5 chr22:11607069-11607088 4.57e-02 8_[-6(3.09e-07)]_1 chr22:12190591-12190610 3.32e-02 20 chr22:12194336-12194355 4.06e-02 4_[+13(8.50e-06)]_5 chr22:12222423-12222442 1.54e-01 20 chr22:12312595-12312614 8.44e-01 20 chr22:12313996-12314015 7.99e-04 3_[-8(7.51e-05)]_2 chr22:12318963-12318982 4.57e-01 20 chr22:12325041-12325060 1.50e-03 7_[-15(9.09e-05)]_5 chr22:12326831-12326852 1.12e-02 22 chr22:12347271-12347290 6.26e-01 20 chr22:12356029-12356048 5.16e-02 1_[+14(9.54e-05)]_11 chr22:12363312-12363331 4.21e-03 2_[+4(2.50e-05)]_3 chr22:12371646-12371665 2.18e-01 20 chr22:12447993-12448012 2.16e-01 20 chr22:12679886-12679905 3.21e-01 20 chr22:12694303-12694322 6.39e-01 20 chr22:12699431-12699450 2.20e-01 20 chr22:12793922-12793942 5.08e-01 21 chr22:16949030-16949049 1.10e-01 6_[-6(9.12e-06)]_3 chr22:16957151-16957170 6.46e-01 20 chr22:16961131-16961164 4.83e-02 13_[-6(8.68e-07)]_1_[+15(9.09e-05)]_\ 1 chr22:16979548-16979567 7.98e-01 20 chr22:16984686-16984705 1.15e-01 20 chr22:16992412-16992431 1.28e-02 3_[-8(4.59e-06)]_2 chr22:17005700-17005719 6.28e-01 20 chr22:18874882-18874901 5.29e-02 10_[-15(9.09e-05)]_2 chr22:18936398-18936417 1.39e-02 20 chr22:18936448-18936467 3.53e-01 20 chr22:18965270-18965289 9.11e-01 20 chr22:18979679-18979698 2.86e-01 20 chr22:19066281-19066300 2.25e-01 20 chr22:19068549-19068568 6.85e-02 20 chr22:19070332-19070351 1.60e-01 20 chr22:19106750-19106769 2.75e-01 2_[+3(2.69e-05)]_4 chr22:19126137-19126156 7.06e-01 20 chr22:19131995-19132014 9.95e-01 20 chr22:19161956-19161975 1.60e-01 20 chr22:19163907-19163926 6.25e-01 2_[+15(9.09e-05)]_10 chr22:19299614-19299633 9.96e-01 20 chr22:24428451-24428470 1.51e-01 20 chr22:24480338-24480357 5.22e-01 20 chrX:48712555-48712576 1.55e-01 10_[+14(2.65e-05)]_4 chrX:48728366-48728385 8.27e-01 20 chrX:48730928-48730947 8.00e-01 20 chrX:48740452-48740471 8.00e-01 20 chrX:48769026-48769045 8.65e-01 20 chrX:48776005-48776024 2.60e-02 3_[-11(5.01e-05)]_2 chrX:48794062-48794081 5.13e-02 20 chrX:48804550-48804569 2.60e-02 3_[-11(5.01e-05)]_2 chrX:48813082-48813101 5.13e-02 20 chrX:48845966-48845985 4.88e-01 20 chrX:48852197-48852216 4.35e-02 20 chrX:48857204-48857223 4.00e-01 20 chrX:48861724-48861743 4.35e-02 20 chrX:48865012-48865031 4.88e-01 20 chrX:48882772-48882791 1.42e-03 5_[+4(1.30e-05)] chrX:48895347-48895366 4.00e-01 20 chrX:48912668-48912687 4.88e-01 20 chrX:48921948-48921967 1.72e-01 20 chrX:71162388-71162407 2.21e-01 20 chrX:71168662-71168681 7.39e-01 20 chrX:71424453-71424472 3.93e-01 20 chrX:71424824-71424843 6.85e-01 20 chrX:102436535-102436554 8.86e-01 20 chrX:102481840-102481859 1.34e-01 20 chrX:102510836-102510855 2.35e-02 3_[+4(6.57e-05)]_2 chrX:151372857-151372876 6.49e-01 20 chrX:151417272-151417291 1.30e-01 [+4(5.99e-05)]_5 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (15) found. ******************************************************************************** CPU: ocelot.grid.gs.washington.edu ********************************************************************************