| Name | Last modified | Size | Description | |
|---|---|---|---|---|
| Parent Directory | - | |||
| CC/ | 2018-09-21 12:32 | - | ||
| asms/ | 2018-09-21 12:37 | - | ||
| extraCCplots/ | 2018-09-21 12:32 | - | ||
| group.0/ | 2018-09-21 12:35 | - | ||
| group.1/ | 2018-09-21 12:36 | - | ||
| real/ | 2018-09-21 12:36 | - | ||
| snvs/ | 2018-09-21 12:26 | - | ||
| truth/ | 2018-09-21 12:32 | - | ||
| final | 2018-09-21 12:37 | 0 | ||
| read_collision.txt | 2018-09-21 12:37 | 21 | ||
| ref.fasta.fai | 2018-09-21 12:26 | 27 | ||
| ref.fasta.bed | 2018-09-21 11:57 | 50 | ||
| sda.config.json | 2018-09-21 11:57 | 162 | ||
| CC.scores.txt | 2018-09-21 12:30 | 186 | ||
| canu.summary.txt | 2018-09-21 12:37 | 515 | ||
| miniasm.summary.txt | 2018-09-21 12:37 | 515 | ||
| wtdbg.summary.txt | 2018-09-21 12:37 | 515 | ||
| reads.bam.bai | 2018-09-21 12:26 | 2.6K | ||
| reads.sample.bam.bai | 2018-09-21 12:26 | 2.6K | ||
| canu.asm.bed | 2018-09-21 12:37 | 7.2K | ||
| miniasm.asm.bed | 2018-09-21 12:37 | 7.2K | ||
| wtdbg.asm.bed | 2018-09-21 12:37 | 7.2K | ||
| group.0.vcf | 2018-09-21 12:30 | 23K | ||
| group.1.vcf | 2018-09-21 12:30 | 26K | ||
| read.duplication.index | 2018-09-21 12:32 | 47K | ||
| ref.fasta | 2018-09-21 11:57 | 76K | ||
| wtdbg.SeqsOnDup.png | 2018-09-21 12:37 | 93K | ||
| canu.SeqsOnDup.png | 2018-09-21 12:37 | 94K | ||
| miniasm.SeqsOnDup.png | 2018-09-21 12:37 | 96K | ||
| canu.CoverageOnAsm.png | 2018-09-21 12:37 | 110K | ||
| miniasm.CoverageOnAsm.png | 2018-09-21 12:37 | 116K | ||
| Coverage.png | 2018-09-21 12:26 | 133K | ||
| HG00733.png | 2018-09-21 12:37 | 133K | ||
| wtdbg.CoverageOnAsm.png | 2018-09-21 12:36 | 134K | ||
| miniasm.sda.table.tsv | 2018-09-21 12:37 | 204K | ||
| canu.sda.table.tsv | 2018-09-21 12:37 | 205K | ||
| wtdbg.sda.table.tsv | 2018-09-21 12:37 | 206K | ||
| miniasm.assemblies.fasta | 2018-09-21 12:35 | 206K | ||
| miniasm.assemblies.pre.pilon.fasta | 2018-09-21 12:35 | 206K | ||
| wtdbg.assemblies.fasta | 2018-09-21 12:35 | 208K | ||
| wtdbg.assemblies.pre.pilon.fasta | 2018-09-21 12:35 | 208K | ||
| canu.assemblies.fasta | 2018-09-21 12:36 | 208K | ||
| canu.assemblies.pre.pilon.fasta | 2018-09-21 12:36 | 208K | ||
| duplications.fasta | 2018-09-21 11:57 | 239K | ||
| HG00733.pdf | 2018-09-21 12:32 | 1.4M | ||
| reads.bam | 2018-09-21 12:26 | 5.3M | ||
| reads.sample.bam | 2018-09-21 12:26 | 5.5M | ||
| reads.orig.bam | 2018-09-21 11:57 | 6.8M | ||