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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| reads.orig.bam | 2018-09-20 17:09 | 6.4M | |
| duplications.fasta | 2018-09-21 11:22 | 239K | |
| ref.fasta | 2018-09-21 11:22 | 76K | |
| ref.fasta.bed | 2018-09-21 11:22 | 50 | |
| sda.config.json | 2018-09-21 11:22 | 162 | |
| reads.bam | 2018-09-21 11:36 | 4.6M | |
| reads.bam.bai | 2018-09-21 11:36 | 1.3K | |
| ref.fasta.fai | 2018-09-21 11:36 | 27 | |
| reads.sample.bam | 2018-09-21 11:36 | 4.7M | |
| reads.sample.bam.bai | 2018-09-21 11:36 | 1.3K | |
| Coverage.png | 2018-09-21 11:36 | 133K | |
| snvs/ | 2018-09-21 11:36 | - | |
| CC.scores.txt | 2018-09-21 11:37 | 171 | |
| group.0.vcf | 2018-09-21 11:37 | 13K | |
| group.1.vcf | 2018-09-21 11:37 | 12K | |
| group.2.vcf | 2018-09-21 11:37 | 7.3K | |
| group.3.vcf | 2018-09-21 11:37 | 2.8K | |
| group.4.vcf | 2018-09-21 11:37 | 2.5K | |
| group.5.vcf | 2018-09-21 11:37 | 4.2K | |
| CC/ | 2018-09-21 11:38 | - | |
| extraCCplots/ | 2018-09-21 11:38 | - | |
| HG00733.pdf | 2018-09-21 11:38 | 614K | |
| truth/ | 2018-09-21 11:39 | - | |
| read.duplication.index | 2018-09-21 11:39 | 87K | |
| group.1/ | 2018-09-21 11:41 | - | |
| group.0/ | 2018-09-21 11:41 | - | |
| wtdbg.assemblies.pre.pilon.fasta | 2018-09-21 11:41 | 185K | |
| group.2/ | 2018-09-21 11:41 | - | |
| group.5/ | 2018-09-21 11:41 | - | |
| wtdbg.assemblies.fasta | 2018-09-21 11:41 | 185K | |
| group.4/ | 2018-09-21 11:41 | - | |
| miniasm.assemblies.fasta | 2018-09-21 11:41 | 172K | |
| miniasm.assemblies.pre.pilon.fasta | 2018-09-21 11:41 | 172K | |
| group.3/ | 2018-09-21 11:41 | - | |
| canu.assemblies.fasta | 2018-09-21 11:41 | 176K | |
| canu.assemblies.pre.pilon.fasta | 2018-09-21 11:41 | 176K | |
| real/ | 2018-09-21 11:41 | - | |
| wtdbg.CoverageOnAsm.png | 2018-09-21 11:41 | 291K | |
| canu.CoverageOnAsm.png | 2018-09-21 11:41 | 298K | |
| miniasm.CoverageOnAsm.png | 2018-09-21 11:41 | 192K | |
| wtdbg.SeqsOnDup.png | 2018-09-21 11:41 | 121K | |
| wtdbg.sda.table.tsv | 2018-09-21 11:41 | 184K | |
| wtdbg.summary.txt | 2018-09-21 11:41 | 1.0K | |
| wtdbg.asm.bed | 2018-09-21 11:41 | 26K | |
| canu.SeqsOnDup.png | 2018-09-21 11:41 | 121K | |
| asms/ | 2018-09-21 11:41 | - | |
| canu.asm.bed | 2018-09-21 11:41 | 26K | |
| canu.sda.table.tsv | 2018-09-21 11:41 | 175K | |
| canu.summary.txt | 2018-09-21 11:41 | 1.0K | |
| miniasm.SeqsOnDup.png | 2018-09-21 11:42 | 121K | |
| miniasm.sda.table.tsv | 2018-09-21 11:42 | 171K | |
| miniasm.summary.txt | 2018-09-21 11:42 | 1.0K | |
| read_collision.txt | 2018-09-21 11:42 | 21 | |
| HG00733.png | 2018-09-21 11:42 | 133K | |
| miniasm.asm.bed | 2018-09-21 11:42 | 26K | |
| final | 2018-09-21 11:42 | 0 | |