000182F.6036400.6082200 collpase from CHM1
region: 000182F.6036400.6082200
copies: 18
number of assemblies: 3
number of CC groups: 6
Regions in reference:
chr18:0-198502[96.291,97.694,98.866][96.927,97.556,98.866] chr10:0-188541[90.403,97.694][90.395,97.694] chr9:138025304-138299952[96.850][98.868]
chr12:34040572-34285598[94.336,95.339,95.113,91.112,89.633,90.943,94.370][94.335,95.339,95.113,91.558,90.470,91.392,94.370] chr4:189863769-190103658[93.775,94.261,94.171][93.928,94.598,98.606] chr3:198013968-198236238[93.763,89.132,90.492,91.983,90.773,90.042,89.813,93.964][93.763,89.132,90.492,91.104,90.773,90.083,89.813,99.010]
chrY:17408564-17636342[99.979][99.979] chrY:18269669-18497439[95.996,99.977][99.952,99.977] chrY:10013096-10242205[89.998,89.574][90.367,93.277]
chr12:38084677-38305993[90.486,95.872,91.693,95.339][93.064,95.872,90.343,95.339] chr16:89984868-90196948[92.792,95.699,99.501][92.792,97.015,99.439] chr1:772959-987409[91.064,94.247,98.521,96.239,93.775,99.517][91.078,94.247,97.913,95.689,93.676,99.342]
chr20:30736478-30956060[94.094,95.740][96.167,95.879] chr20:29700076-29916726[90.954,92.327][92.580,95.135] chr3:75593147-75804816[94.707,96.501][95.102,94.790]
chrX:155900337-156040895[92.070,96.976][92.070,97.599] chrY:57086857-57227415 chr22:11447337-11662041[98.572,96.915][98.572,96.803]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18.
3 Failed 25 38 None None None None None 3 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
5 Failed 4 130 None None None None None 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 MultipleAsm 47 261 94.06 32152 99.28 68705 copy1 4 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 Success 277 168 93.91 25026 99.71 52940 copy3 0 0 1 160 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0
1 Success 201 216 93.5 38514 99.72 77296 copy2 1 0 116 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0
2 Success 43 73 93.63 11495 99.69 12072 copy11 2 0 0 0 0 0 0 1 0 0 0 24 0 0 0 0 0 0 0