000262F.4009400.4063700 collpase from CHM1
region: 000262F.4009400.4063700
copies: 13
number of assemblies: 6
number of CC groups: 17
Regions in reference:
chr5:100215696-100529656[98.644,98.664][98.644,98.619] chr5:99290628-99534832[98.644,98.610][98.644,98.320] chr5:21375829-21596178[97.914,96.413][97.966,98.148]
chr6:57825433-58044724[96.149,97.505][97.908,97.454] chr6:26784360-27004157[99.685][98.671] chr5:69794938-70015237[99.604][99.741]
chr5:70670820-70890287[99.604][99.741] chr5:34077495-34297443[98.313][98.332] chr5:70417325-70634385[99.604][99.741]
chr5:69541209-69758260[99.604][99.741] chr5:70120935-70338001[99.604][99.741] chr5:71121299-71338343[99.750][99.317]
chr5:37361383-37587479[96.416,96.581,92.267,96.919][96.416,96.567,93.168,97.009]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13.
0 Failed 78 97 None None None None None 0 0 0 0 63 0 0 0 0 0 0 0 0 1
2 Failed 50 68 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 46
5 Failed 8 60 None None None None None 5 0 0 0 0 0 0 0 0 3 0 0 0 1
7 Failed 7 55 None None None None None 7 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Failed 11 88 None None None None None 8 0 0 5 0 0 0 0 0 0 0 0 0 0
9 Failed 8 57 None None None None None 9 0 0 0 0 0 0 0 0 0 0 0 0 0
12 Failed 6 80 None None None None None 12 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Failed 5 97 None None None None None 13 0 0 0 0 0 0 2 0 0 0 0 0 0
16 Failed 4 63 None None None None None 16 0 0 0 0 2 0 0 0 0 0 0 0 0
4 MultipleAsm 53 102 96.96 17181 98.75 22669 copy1 4 1 0 0 0 0 0 0 0 1 0 0 0 4
14 MultipleAsm 5 94 98.23 18830 98.99 19454 copy7 14 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 134 222 91.56 6409 99.95 37904 copy2 1 0 129 0 0 0 0 0 0 0 0 0 0 0
3 Success 81 99 97.64 18830 99.81 19784 copy5 3 0 0 0 0 56 0 0 0 1 0 0 0 2
6 Success 55 235 97.21 26516 99.86 84235 copy1 6 53 0 0 0 0 0 0 0 0 0 0 0 0
10 Success 6 49 97.75 11735 99.21 12488 copy6 10 0 0 0 0 0 2 0 0 1 0 0 0 0
11 Success 6 61 98.31 11146 99.84 9016 copy12 11 0 0 0 0 0 0 0 0 0 0 0 0 1
15 Success 4 49 98.46 15749 98.3 15881 copy3 15 0 0 0 0 0 0 0 0 0 0 0 0 2