000377F.1120500.1135900 collpase from CHM1
region: 000377F.1120500.1135900
copies: 19
number of assemblies: 12
number of CC groups: 17
Regions in reference:
chr16:11795468-12078680[89.502,89.502,96.532,97.820][89.502,89.502,96.532,98.355] chr16:21298462-21521269[98.579][98.861] chr16:22417638-22639760[99.443,95.104][99.443,99.324]
chr16:21731325-21953549[97.532,99.443][98.296,99.410] chr16:29277609-29500053[96.874,99.463,95.866][97.199,99.148,98.275] chr16:30120352-30341745[90.546,95.181,99.463][91.278,95.181,99.330]
chr16:74275509-74495091[97.579,98.680,98.665][97.579,97.875,98.844] chr16:28936168-29155737[99.189,96.874][98.344,97.199] chr18:11516306-11735736[95.134,97.380,97.662][96.995,97.380,97.985]
chr16:28239540-28459001[90.579,98.146][90.579,99.504] chr16:14835862-15055458[97.902,96.408][97.933,99.440] chr16:28656302-28875820[96.189][99.377]
chr16:15001779-15225070[97.902,97.558,99.344][97.933,98.123,99.068] chr16:18255557-18474365[99.344][99.368] chr16:16234349-16453123[99.266][99.244]
chr16:14649155-14867974[96.408][99.440] chr16:15261096-15479738[93.543,91.671,91.613,99.344][94.297,92.357,92.309,99.068] chr16:69873322-70092434[99.101,98.234][98.063,98.023]
chr16:28353344-28571892[98.146][99.504]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19.
0 Failed 24 62 None None None None None 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
1 Failed 72 67 None None None None None 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 0
3 Failed 12 78 None None None None None 3 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0
5 Failed 5 39 None None None None None 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Failed 7 81 None None None None None 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 15 87 98.21 23082 99.86 22573 copy13 2 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0
4 Success 53 72 97.99 19687 99.76 18921 copy9 4 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0
6 Success 8 69 98.25 20271 99.75 19956 copy8 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0
7 Success 24 84 98.25 19551 99.96 18640 copy16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
8 Success 28 81 98.02 22052 99.84 51513 copy1 8 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9 Success 19 110 98.1 20636 99.91 20224 copy7 9 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 1 0
10 Success 14 91 98.22 19575 99.89 18725 copy17 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0
11 Success 14 67 98.3 19159 99.97 18322 copy15 11 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0
12 Success 10 78 98.27 19535 99.97 19038 copy12 12 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0
13 Success 8 78 98.17 19510 99.77 19051 copy7 13 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0
15 Success 6 67 98.31 18545 99.97 18001 copy19 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6
16 Success 4 83 98.51 20492 99.65 20021 copy8 16 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0