000394F.605100.616600 collpase from CHM1
region: 000394F.605100.616600
copies: 17
number of assemblies: 6
number of CC groups: 16
Regions in reference:
chr1:21276141-21562958[91.679,91.525,96.160,98.704,92.091][91.679,91.747,97.124,98.704,94.966] chr1:143517232-143743650[93.537,95.944,91.919,91.380][92.624,98.696,99.365,91.783] chr1:144340989-144561922[91.919,90.823][99.365,99.512]
chr1:148983129-149203814[95.750][99.410] chr1:120314763-120535539[99.194,99.328][99.281,99.233] chr1:16450310-16667389[89.877,92.057,93.704,97.320][89.875,93.672,96.533,98.612]
chr1:16497764-16713862[92.057,93.704,97.320][93.672,96.533,98.612] chr1:146838398-147059170[99.381,92.384][97.356,99.355] chr1:145306255-145525878[97.891,90.823][97.558,99.512]
chr1:148944344-149159135[95.750][99.410] chr1:146891074-147105868[93.146,89.901,93.649,89.914,99.381,92.384][93.071,89.901,93.777,90.202,97.356,99.355] chr1:145462646-145677431[93.785,97.891,98.873,90.823][93.785,97.558,98.873,99.512]
chr1:120362755-120577515[99.194,99.328][99.281,99.233] chr1:145955012-146169753[92.384][99.355] chr1:148027976-148244845[92.057][98.375]
chr1:143484140-143698558[93.537,95.944,91.380][92.624,98.696,91.783] chr1:119750314-119962794[89.961,89.576][91.137,91.752]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17.
3 Failed 4 55 None None None None None 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
4 Failed 8 65 None None None None None 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Failed 27 76 None None None None None 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Failed 20 71 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Failed 8 67 None None None None None 10 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
11 Failed 8 40 None None None None None 11 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0
12 Failed 5 90 None None None None None 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Failed 4 55 None None None None None 13 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Failed 4 71 None None None None None 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
15 Failed 4 82 None None None None None 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 Success 4 90 96.61 14709 98.08 20568 copy4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 5 70 96.35 4225 96.56 7954 copy1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0
2 Success 9 58 96.57 14228 99.99 14725 copy14 2 0 0 0 0 0 0 0 0 0 0 0 1 0 5 0 0 0
5 Success 36 95 93.8 14874 99.77 51653 copy1 5 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Success 35 68 96.62 12301 100.0 14506 copy11 6 0 0 0 0 0 0 0 0 0 0 0 2 0 1 9 0 0
9 Success 16 87 95.21 13596 98.42 17070 copy6 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0