000508F.1237800.1564400 collpase from CHM1
region: 000508F.1237800.1564400
copies: 22
number of assemblies: 19
number of CC groups: 35
Regions in reference:
chr15:22377795-22882193[95.021,99.650][95.276,99.068] chr15:28472366-28962099[91.956,89.474,91.934,89.887,98.262][91.956,89.474,91.934,90.532,99.035] chr15:28093119-28439261[92.618,94.435,93.095,91.584,93.579,97.004,96.784][92.618,94.589,92.480,93.199,93.579,97.004,98.831]
chr15:20328924-20623267[94.097,92.609,99.650][95.404,98.188,99.650] chr15:32414567-32707507[99.565][99.550] chr15:30299641-30593088[90.853][99.555]
chr15:23327778-23566118[92.647,93.355,91.856,89.555,94.988,97.002,99.889,91.471][92.647,93.355,91.856,89.555,94.988,93.931,98.578,91.471] chr5:7181782-7411784[97.456][97.456] chr15:32341006-32577816[99.565][99.550]
chr15:30429815-30666597[94.636,90.853][93.293,99.555] chr16:32051785-32277703[98.844][99.355] chr16:32994714-33218682[99.429][99.538]
chr16:32651725-32875685[99.429][99.538] chr3:33737284-33959669[95.766][95.766] chr15:23186638-23403766[92.647,94.988,99.735,99.889][92.647,94.988,99.308,98.578]
chr15:82709629-82927843[93.296][93.170] chr15:101667678-101882973[91.205,97.006,99.055][91.205,97.030,99.144] chr15:75157914-75374356[89.990,92.523,90.247,90.830,91.885][89.990,93.694,97.816,92.052,92.424]
chr15:72554053-72770506[91.426,89.230,93.466,91.742][91.492,89.230,98.097,92.701] chr20:13514938-13725786[95.524][95.524] chr15:20412940-20624875[94.097,99.650][95.404,99.650]
chr15:84135103-84346239[94.812,99.822][97.250,98.572]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21.
0 Failed 121 190 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 0 0 114 0 0 0 0 0 0 0
1 Failed 349 94 None None None None None 1 0 1 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Failed 36 101 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0
6 Failed 164 103 None None None None None 6 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Failed 67 152 None None None None None 8 0 0 0 0 0 0 0 0 0 0 63 0 0 0 0 0 0 0 0 0 0
9 Failed 63 119 None None None None None 9 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 15
13 Failed 34 89 None None None None None 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
18 Failed 13 105 None None None None None 18 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
19 Failed 10 144 None None None None None 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
22 Failed 8 83 None None None None None 22 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0
23 Failed 7 64 None None None None None 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
24 Failed 7 119 None None None None None 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
25 Failed 7 231 None None None None None 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
26 Failed 6 124 None None None None None 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
31 Failed 4 62 None None None None None 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 MultipleAsm 61 314 93.81 14371 96.49 10853 copy20 10 0 54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 506 108 92.71 5661 99.93 18201 copy16 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 484 0 0 0 0 0
4 Success 359 242 93.5 15654 99.97 75640 copy3 4 0 0 353 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
5 Success 165 372 92.98 15918 98.92 80627 copy1 5 120 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Success 117 205 95.42 13145 99.92 66570 copy3 7 0 0 115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
11 Success 61 347 95.61 24688 99.96 86878 copy2 11 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
12 Success 57 236 93.04 11143 99.84 33538 copy4 12 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Success 30 289 93.24 14730 99.83 55142 copy5 14 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
15 Success 25 157 91.83 15345 99.83 56267 copy4 15 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
16 Success 20 177 92.58 13810 99.8 52184 copy10 16 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 Success 14 125 92.24 13642 99.99 50996 copy2 17 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
20 Success 9 195 93.86 11179 99.71 19816 copy6 20 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
21 Success 8 55 93.67 11604 99.28 19768 copy3 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
27 Success 6 53 92.39 6374 99.95 18341 copy15 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0
28 Success 5 77 94.02 11696 99.79 18513 copy1 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
29 Success 5 60 94.44 10400 99.77 15803 copy10 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
30 Success 5 133 92.48 13846 99.78 51377 copy4 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
32 Success 4 71 93.76 11974 99.23 20004 copy3 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
33 Success 4 76 94.47 10753 99.52 16346 copy9 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0
34 Success 4 60 93.84 12034 99.99 20353 copy2 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0