000696F.51800.114500 collpase from CHM1
region: 000696F.51800.114500
copies: 25
number of assemblies: 10
number of CC groups: 13
Regions in reference:
chr7:65638479-65973295[89.655,96.403,90.556,96.905,90.826,92.922,89.846][89.655,95.013,90.042,96.905,93.191,98.759,90.082] chr7:64962896-65206458[95.063,96.403][99.372,97.377] chr7:56277122-56503941[92.977,95.021,90.663,95.310,89.347,96.848,90.323][92.977,95.021,90.663,95.310,89.348,97.020,90.656]
chr1:242957014-243182804[97.215,98.294][98.243,98.294] chr7:39666732-39891999[92.250,90.390,92.429,99.563,96.855,97.442][92.250,90.470,92.878,98.189,96.898,97.469] chr1:223852035-224078011[90.527,91.890,98.374][90.527,91.890,98.512]
chr1:222376899-222605284[97.663][98.072] chr4:119309882-119535642[98.006,97.620][98.006,97.833] chr4:118504896-118730695[97.999,98.236][98.309,98.268]
chr10:38322092-38548070[91.808,93.061,98.518][91.808,96.110,98.082] chr7:128526485-128751444[97.067][97.141] chr5:181200343-181424308[94.801][99.401]
chr1:636400-859812[94.247,98.521,99.517][94.247,97.913,99.342] chr3:198095289-198295559[91.983,90.773,93.964][91.104,90.773,99.010] chr1:394642-617943[99.795,99.517][99.790,99.342]
chr16:90043131-90266422[92.792,95.699,99.501][92.792,97.015,99.439] chr19:101406-324721[94.760,94.760,99.686][94.760,94.760,99.452] chr17:0-191574[99.234][99.289]
chr11:31119-253777[99.692][99.511] chr7:51290951-51510752[90.016][97.174] chr1:40409-259347[99.197,99.145][99.506,99.331]
chr7:55646648-55863041[90.018,90.885,89.975,91.921,97.547,95.154,90.666,91.690,97.912][91.462,90.885,89.975,91.921,97.546,96.517,90.666,91.690,97.921] chr7:63625117-63846537[97.674][98.629] chr7:75979381-76201015[91.469,91.469,89.401,89.571,91.566,90.733,91.525,94.966][91.469,91.469,94.063,89.570,92.651,91.280,91.525,94.650]
chr7:56730478-56951254[97.570,99.174][97.570,98.970]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25.
0 Failed 76 98 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Failed 4 84 None None None None None 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
9 MultipleAsm 5 55 96.2 22283 98.43 28005 copy7 9 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 34 123 90.58 11810 88.87 14512 copy13 1 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 82 162 90.88 10285 90.23 14877 copy8 2 0 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 28 58 95.83 22095 97.83 24936 copy4 3 0 0 0 0 0 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 1 0 0 0
4 Success 121 92 95.32 22387 97.58 25226 copy3 4 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 30 82 92.03 22539 91.48 30881 copy7 5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Success 18 54 96.69 18152 99.71 24799 copy7 6 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Success 18 55 96.35 21773 99.99 25015 copy4 7 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Success 6 48 96.31 17270 99.27 20674 copy8 8 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
11 Success 4 69 97.0 17800 98.4 21608 copy4 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
12 Success 4 42 92.62 16174 94.14 23729 copy23 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0