000728F.1375500.1393700 collpase from CHM1
region: 000728F.1375500.1393700
copies: 21
number of assemblies: 4
number of CC groups: 6
Regions in reference:
chr15:73919468-74183794[90.123,92.907][90.123,97.637] chr15:75181590-75408898[89.990,92.523,90.247,90.830,91.885,90.198][89.990,93.694,97.816,92.052,92.424,90.197] chr15:75674326-75903143[93.296,92.248,89.468,90.909,89.102,89.177,89.850,96.700,93.819,91.976][93.667,92.335,89.469,90.909,89.102,89.177,93.927,96.700,93.276,91.976]
chr15:78617681-78840497[97.531,91.269,93.787,94.948][97.531,92.199,93.787,94.812] chr15:77808510-78028102[90.297,92.465,94.717,95.296,94.948][90.161,94.881,94.717,96.176,94.949] chr15:72553452-72771361[91.426,89.230,93.466,91.742][91.492,89.230,98.097,92.701]
chr15:30294251-30515178[90.853][99.555] chr15:32335602-32556552[99.565][99.550] chr15:30034098-30253406[96.032,90.853][95.973,99.555]
chr10:30256095-30475698[89.468,90.529,89.650,89.501][89.469,90.529,89.650,90.181] chr15:101664954-101883311[91.205,97.006,99.055][91.205,97.030,99.144] chr15:84403713-84620431[92.257,99.822][90.887,98.572]
chr15:82418335-82634104[93.866][98.042] chr15:34419677-34636711[91.606,98.851,91.183,92.368,90.787,92.116][91.606,98.851,96.293,92.368,92.399,92.151] chr15:22323769-22538847[99.650][99.068]
chr15:28597798-28813338[98.262][99.035] chr15:28418710-28633821[98.262,96.784][99.035,98.831] chr15:22503376-22718773[99.650][99.068]
chr15:85139158-85353256[93.816,93.215,89.624,97.554,92.257][93.816,92.737,89.624,97.554,98.028] chr15:82236735-82450690[94.812,94.902,93.787,93.866][94.812,94.902,93.788,98.042] chrY:24110228-24322418[99.093,99.956][99.665,99.793]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21.
1 Failed 23 85 None None None None None 1 0 0 1 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Failed 27 92 None None None None None 3 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 Success 118 100 93.16 11073 99.49 15057 copy8 0 0 0 0 0 0 0 0 15 2 0 0 0 0 1 0 0 0 0 0 0 0
2 Success 69 101 91.91 15582 94.39 28441 copy1 2 0 0 42 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
4 Success 10 79 92.62 14622 99.73 17385 copy6 4 1 0 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
5 Success 5 90 92.43 18496 97.7 28061 copy1 5 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0