000954F.658200.671400 collpase from CHM1
region: 000954F.658200.671400
copies: 28
number of assemblies: 5
number of CC groups: 5
Regions in reference:
chr11:71443857-71718405[92.153,93.048,93.674,93.706,92.763,93.674,95.207][92.153,93.048,92.830,93.706,95.545,93.704,96.546] chr4:8841518-9079778[92.997][96.276] chr7:6739601-6976440[93.030,99.074,96.466][95.222,99.074,96.093]
chr4:4028888-4271822[95.442][95.318] chr11:67610259-67832063[93.553,96.998][93.553,96.205] chr3:125615898-125845835[95.915,92.714][95.915,95.056]
chr4:9350751-9582440[99.875][95.610] chr11:71784798-72013398[95.068,96.972][95.068,96.351] chr2:70919322-71153492[93.756,93.721,97.492,91.821][93.135,93.720,97.492,94.250]
chr2:158746949-158973011[92.348,92.576][91.245,94.660] chr12:8317096-8544369[91.968,96.972][91.967,96.036] chr10:14888761-15115328[88.974,90.614,91.555,93.555,95.129,95.129][88.974,92.581,92.338,93.896,95.129,95.129]
chr3:129915324-130131216[95.510][95.913] chr8:11927362-12143265[92.148,97.390][92.819,98.271] chr8:12578156-12793514[98.681][97.367]
chr4:3783095-3998322[95.442][95.318] chr3:75251547-75467149[94.316,95.668,94.677,95.731,92.636][94.316,94.503,94.619,95.731,94.952] chr9:90645985-90859881[91.605][96.253]
chr11:71464793-71683803[92.153,93.048,93.674,93.706,92.763,93.674,95.207][92.153,93.048,92.830,93.706,95.545,93.704,96.546] chr3:75501287-75724086[94.707,96.501,92.636][95.102,94.790,94.952] chr8:7486184-7699146[99.058,98.669][98.727,99.027]
chr8:7934176-8147143[99.058][98.727] chr8:7140422-7353402[91.453,98.669][95.079,99.027] chr8:7598966-7811865[99.058,98.669][98.727,99.027]
chr11:67876515-68096160[93.553,96.998][93.553,96.205] chr8:11823562-12035387[92.148,97.390][92.819,98.271] chr13:41321399-41542148[95.853,93.643,91.241][95.853,93.475,92.500]
chr11:1495238-1705571[93.527,93.048,90.921,92.153,92.542][93.527,93.048,90.921,92.153,92.542]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27.
0 Success 73 71 94.20 16617 95.13 29074 copy4 0 0 4 1 1 0 1 0 2 0 4 1 1 0 0 1 3 1 0 0 0 0 0 0 2 0 0 0
1 Success 19 73 94.56 13126 95.23 14860 copy5 1 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 28 59 94.46 13415 94.62 15446 copy8 2 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 27 57 94.30 22411 95.29 41190 copy4 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 4 48 94.82 15907 96.30 23190 copy1 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0