001024F.522500.574800 collpase from CHM1
region: 001024F.522500.574800
copies: 20
number of assemblies: 28
number of CC groups: 30
Regions in reference:
chr13:18720769-19025385[91.978,91.221,91.461,91.392,94.088,95.852,91.213,99.091][91.978,91.220,91.461,91.392,93.716,95.838,91.213,97.905] chr18:14085462-14340728[90.706,91.557,97.906,94.581][90.706,91.557,97.233,97.126] chr21:13819249-14074073[90.583,91.966,94.581,97.906,97.909][90.583,91.966,95.372,95.729,98.152]
chr9:67764497-68015976[99.606][99.484] chr9:65996322-66247777[99.355][99.548] chr9:40128469-40379983[98.767][99.319]
chr9:42757764-43009320[98.246][98.203] chr2:94700419-94952092[97.788][96.538] chr9:64274749-64526198[99.137][99.121]
chr20:30567174-30818869[93.760,94.094,91.797,95.740][93.760,96.167,96.631,95.879] chr9:63976964-64232876[99.101,95.777][99.101,95.973] chr22:11763311-12001448[98.657][98.367]
chr21:13395175-13632737[97.944,97.909][97.944,98.152] chr18:14525673-14762520[89.656,94.581][92.934,97.126] chr21:8753507-8986322[97.451][99.202]
chr4:49390966-49610093[98.367][98.151] chr9:33448475-33664758[94.689,93.017,95.353,95.617,94.259,93.941,94.883][95.198,93.017,95.178,95.617,94.259,93.941,97.072] chr9:38479624-38695865[96.363][96.270]
chr4:59688814-59902395[91.231][91.285] chr9:97064305-97278508[95.370,94.486][95.370,94.912]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20.
11 Failed 28 102 None None None None None 11 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0
12 Failed 27 94 None None None None None 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 Success 112 170 94.91 36147 98.24 51426 copy4 0 0 0 0 0 0 0 0 104 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 197 242 94.26 35783 99.86 54262 copy3 1 0 0 166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 169 189 94.5 35718 99.98 54900 copy2 2 0 158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 278 197 94.29 36172 99.93 51543 copy10 3 0 0 0 0 0 0 0 0 0 244 0 0 0 0 0 0 0 0 0 0
4 Success 31 156 94.11 23783 98.67 32812 copy15 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
5 Success 84 199 95.06 36251 99.61 51183 copy7 5 0 0 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 1 0 0
6 Success 50 171 94.28 23432 98.86 31859 copy12 6 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0
7 Success 10 132 95.35 35598 99.68 50920 copy4 7 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Success 184 169 94.63 36322 99.92 55830 copy11 8 0 0 0 0 0 0 0 0 0 0 165 0 0 0 0 0 0 1 0 0
9 Success 84 243 94.78 39188 99.75 80128 copy1 9 63 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Success 44 187 95.27 35821 99.4 51004 copy6 10 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 3 0 0
13 Success 26 137 94.04 29276 96.38 46690 copy11 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Success 23 173 95.32 35815 99.58 50811 copy9 14 0 0 0 1 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0
15 Success 23 81 94.18 27697 95.98 38851 copy11 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
16 Success 20 137 93.97 25433 96.0 35806 copy11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 Success 20 136 94.03 25490 95.99 35550 copy11 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
18 Success 19 138 94.19 23488 98.69 32475 copy15 18 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0
19 Success 17 53 93.61 10841 99.8 13260 copy16 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0
20 Success 14 150 94.23 23780 98.73 32809 copy15 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
21 Success 14 140 94.15 23743 99.78 32760 copy15 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
22 Success 14 123 94.14 23779 98.7 32811 copy15 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
23 Success 11 135 94.13 23272 99.82 32207 copy15 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
24 Success 11 154 94.18 23783 99.99 32812 copy15 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0
25 Success 9 128 94.18 23783 98.67 32811 copy15 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
26 Success 9 59 95.31 24658 99.96 32591 copy5 26 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
27 Success 7 100 95.23 30272 99.97 44016 copy5 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
28 Success 5 94 94.17 28772 96.49 46243 copy11 28 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
29 Success 4 51 93.33 24740 96.68 32434 copy10 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0