001173F.340300.347500 collpase from CHM1
region: 001173F.340300.347500
copies: 22
number of assemblies: 4
number of CC groups: 9
Regions in reference:
chr12:8297939-8570894[91.968,96.972][91.967,96.036] chr7:97824948-98059193[90.771][94.362] chr3:75476011-75714224[94.707,96.501,92.636][95.102,94.790,94.952]
chr11:67851531-68086469[93.553,96.998][93.553,96.205] chr11:71510150-71743782[92.153,93.048,93.674,93.706,92.763,93.674,95.207][92.153,93.048,92.830,93.706,95.545,93.704,96.546] chr4:8869222-9105050[92.997][96.276]
chr8:7123366-7352519[91.453,98.669][95.079,99.027] chr8:7487060-7716163[99.058,98.669][98.727,99.027] chr8:7581962-7811058[99.058,98.669][98.727,99.027]
chr8:7935052-8164164[99.058][98.727] chr3:129899065-130130300[95.510][95.913] chr8:11910844-12142223[92.148,97.390][92.819,98.271]
chr8:12560784-12775067[98.681][97.367] chr11:3476957-3690341[95.284][96.146] chr3:125657920-125871119[95.915,92.714][95.915,95.056]
chr9:90119845-90332266[96.826][96.166] chr7:6738004-6950265[93.030,99.074,96.466][95.222,99.074,96.093] chr14:51644760-51857134[94.199,92.672,94.132][94.199,94.518,94.648]
chr4:9424795-9636622[99.875][95.610] chr9:90652071-90863089[91.605][96.253] chr8:6985571-7196369[99.885,91.453,98.669][99.885,95.079,99.027]
chr3:8571905-8788294[91.842,90.530,94.589][91.769,90.530,95.258]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22.
0 Failed 35 37 None None None None None 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Failed 29 97 None None None None None 1 0 0 0 0 0 0 0 0 0 12 0 0 0 1 0 0 0 0 0 0 0 0
2 Failed 10 57 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Failed 21 47 None None None None None 6 0 5 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0
8 Failed 4 62 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 29 82 94.15 26903 93.02 43134 copy5 3 25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 41 51 94.1 10228 95.95 14267 copy13 4 0 0 1 1 0 2 0 0 0 0 0 22 0 0 0 0 0 0 0 0 1 0
5 Success 63 50 94.51 10257 96.16 13906 copy1 5 0 1 0 0 0 1 0 0 0 0 2 1 0 0 41 0 0 0 0 0 1 0
7 Success 12 67 95.36 11275 98.26 13072 copy11 7 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0