001197F.225400.232500 collpase from CHM1
region: 001197F.225400.232500
copies: 29
number of assemblies: 3
number of CC groups: 8
Regions in reference:
chr4:3755708-4013176[95.442][95.318] chr3:129913552-130146128[95.510][95.913] chr11:67616233-67847033[93.553,96.998][93.553,96.205]
chr7:6759981-6991057[93.030,99.074,96.466][95.222,99.074,96.093] chr3:75250521-75482060[94.316,95.668,94.677,95.731,92.636][94.316,94.503,94.619,95.731,94.952] chr3:125629044-125856068[95.915,92.714][95.915,95.056]
chr12:8307202-8533870[91.968,96.972][91.967,96.036] chr8:12576398-12801416[98.681][97.367] chr8:11925608-12143111[92.148,97.390][92.819,98.271]
chr4:4018295-4235039[95.442][95.318] chr7:97838804-98056012[90.771][94.362] chr11:67866238-68083166[93.553,96.998][93.553,96.205]
chr4:9644379-9863107[99.875][95.610] chr3:75490667-75708724[94.707,96.501,92.636][95.102,94.790,94.952] chr11:71510970-71729033[92.153,93.048,93.674,93.706,92.763,93.674,95.207][92.153,93.048,92.830,93.706,95.545,93.704,96.546]
chr2:70916904-71135945[93.756,93.721,97.492,91.821][93.135,93.720,97.492,94.250] chr4:8872393-9090439[92.997][96.276] chr2:158758250-158977488[92.348,92.576][91.245,94.660]
chr4:9406459-9621890[99.875][95.610] chr10:14886163-15104290[88.974,90.614,91.555,93.555,95.129,95.129][88.974,92.581,92.338,93.896,95.129,95.129] chr9:90111783-90334968[96.826][96.166]
chr11:71797957-72013387[95.068,96.972][95.068,96.351] chr8:7486495-7700910[99.058,98.669][98.727,99.027] chr8:7597186-7811623[99.058,98.669][98.727,99.027]
chr8:7138642-7353084[91.453,98.669][95.079,99.027] chr8:7934487-8148907[99.058][98.727] chr11:3491642-3702648[95.284][96.146]
chr8:6968199-7182948[99.885,91.453,98.669][99.885,95.079,99.027] chr3:8581887-8794004[91.842,90.530,94.589][91.769,90.530,95.258]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28. 29.
0 Failed 2 52 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Failed 7 66 None None None None None 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0
4 Failed 32 43 None None None None None 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0
6 Failed 6 49 None None None None None 6 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Failed 5 46 None None None None None 7 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 24 72 94.39 16574 94.6 18371 copy6 2 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 62 66 90.98 8886 93.86 10686 copy10 3 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 14 48 94.48 17911 94.15 22572 copy6 5 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0