001215F.24400.285800 collpase from CHM1
region: 001215F.24400.285800
copies: 16
number of assemblies: 12
number of CC groups: 16
Regions in reference:
chr9:67278683-67769428[99.606][99.484] chr9:61811215-62249738[99.646][99.646] chr9:38673808-39085249[99.473][99.346]
chr9:41599194-41908767[97.765][99.166] chr9:65361264-65646795[97.954,99.355][97.678,99.548] chr17:22212307-22488971[92.934,90.970,94.253,96.301,94.253][93.053,93.768,99.131,94.555,94.483]
chr9:61450462-61715652[99.803,97.828][99.804,97.611] chr20:25898673-26161836[94.765][96.364] chr20:25694068-25945152[99.432,94.765][99.432,96.364]
chr12:37455212-37696059[95.762][95.579] chr4:3434479-3671213[96.736,97.355][96.736,97.346] chr7:57700211-57922154[95.067,93.738][97.657,95.681]
chr7:57548904-57761236[93.738][95.681] chr20:30235905-30446082[93.876,96.595][96.294,96.506] chr20:29436884-29648495[94.921,96.537,97.200,96.222,97.246][95.524,96.513,97.200,96.266,96.581]
chr19:36679628-36890820[93.918,89.608,91.084,90.665][94.268,91.003,91.312,90.966]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16.
2 Failed 9 46 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8
5 Failed 62 42 None None None None None 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 MultipleAsm 41 148 95.17 28569 99.82 45008 copy8 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0
14 MultipleAsm 6 100 94.3 19371 99.52 44958 copy4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 Success 54 116 92.74 19271 99.88 32228 copy10 0 0 0 0 0 0 0 0 0 0 36 0 0 0 0 0 0
3 Success 2 45 94.67 19081 100.0 34019 copy5 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
4 Success 109 349 95.7 22313 99.95 99126 copy2 4 2 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Success 55 101 95.0 27561 100.0 49031 copy5 6 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0
7 Success 47 291 92.72 18062 99.77 99516 copy1 7 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Success 30 325 96.02 37625 99.63 72330 copy4 8 4 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0
9 Success 23 228 92.3 14734 99.82 73285 copy3 9 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Success 18 213 92.74 16623 99.87 91994 copy3 10 1 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0
11 Success 13 150 93.3 14167 99.83 61817 copy3 11 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0
12 Success 13 105 95.58 24272 99.96 39670 copy2 12 1 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Success 10 84 93.94 10043 99.82 40465 copy3 13 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0
15 Success 5 90 92.49 8195 99.8 36517 copy3 15 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0