001360F.200.175100 collpase from CHM1
region: 001360F.200.175100
copies: 19
number of assemblies: 11
number of CC groups: 19
Regions in reference:
chr21:13544401-13951935[97.909][98.152] chr18:14233792-14608925[94.581][97.126] chr13:18493846-18846907[99.091][97.905]
chr21:6689085-7029217[99.995,99.876,99.997][99.997,99.839,99.998] chr15:21224053-21506832[99.252,95.331][97.485,99.589] chr15:20654995-20933240[92.985,99.589][95.405,99.590]
chr2:137783065-138043872[90.497,90.497,92.422,92.255][90.497,90.497,92.634,92.324] chr2:131529657-131780812[96.816][95.659] chr14:18902379-19160684[99.394][99.424]
chr22:15624995-15883276[99.578][99.488] chr14:19239362-19478872[99.394][99.424] chr9:40221174-40458452[98.767][99.319]
chr9:65917869-66155130[99.355][99.548] chr2:94625912-94864695[97.788][96.538] chr9:42846220-43084804[98.246][98.203]
chr9:64361202-64598515[99.137][99.121] chr15:21728502-21944197[95.331,99.568][99.589,99.553] chr1:90180641-90398477[92.897][92.461]
chr20:30505596-30718391[93.760,91.797,95.740][93.760,96.631,95.879]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19.
7 Failed 307 118 None None None None None 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 261 0
9 Failed 39 41 None None None None None 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
11 Failed 22 74 None None None None None 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 0 0
12 Failed 19 47 None None None None None 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
15 Failed 4 93 None None None None None 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
18 Failed 4 66 None None None None None 18 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
1 MultipleAsm 21 266 94.21 30447 99.74 58519 copy1 1 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 MultipleAsm 81 99 92.68 14951 99.84 33235 copy12 8 0 1 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0
0 Success 115 543 94.86 47951 99.74 154404 copy1 0 2 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0
2 Success 15 133 93.38 21359 99.75 73938 copy3 2 0 0 11 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 10 308 94.11 41994 99.88 118037 copy2 3 0 6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 16 230 93.74 32479 99.9 71599 copy2 4 0 13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 551 172 90.74 10379 99.85 32570 copy7 5 0 0 0 0 0 0 538 0 0 0 0 0 0 0 0 0 0 0 0
6 Success 419 81 92.06 7670 99.8 29601 copy7 6 0 0 0 0 0 0 405 0 0 0 0 0 0 0 0 0 0 0 0
10 Success 33 302 93.95 32774 99.7 79975 copy5 10 1 1 1 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Success 18 104 93.23 8872 98.89 21516 copy14 13 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0
14 Success 10 219 94.12 34330 99.72 82767 copy5 14 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
16 Success 4 82 93.35 14971 99.72 30566 copy5 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 Success 4 93 92.9 15931 99.66 29263 copy11 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0