001369F.400.182700 collpase from CHM1
region: 001369F.400.182700
copies: 22
number of assemblies: 26
number of CC groups: 42
Regions in reference:
chr2:131472456-131869090[96.816,98.951][95.659,97.517] chr14:19127023-19552227[99.394][99.424] chr22:15572100-15995616[99.578][99.488]
chr14:18849719-19269830[99.394][99.424] chr18:14339425-14644521[94.581][97.126] chr15:21233226-21541376[99.252,95.331][97.485,99.589]
chr21:13508838-13786474[97.909][98.152] chr15:20696103-20967646[99.589][99.590] chr2:130349941-130610466[94.039,94.039,97.414][94.039,94.039,99.239]
chr2:130510286-130763848[97.414][99.239] chr2:129968292-130221619[94.507,96.734][95.482,97.372] chr15:21728502-21978612[95.331,99.568][99.589,99.553]
chr22:10735146-10966201[99.842,97.727,91.895][99.842,97.727,95.916] chr13:34934503-35172669[93.969,92.985,93.454][93.969,93.301,93.139] chr21:6689085-6921441[99.995,99.876][99.997,99.839]
chr9:41239153-41455421[97.765][99.166] chr21:10022143-10238892[97.609][98.465] chr21:8924932-9140826[99.720,95.185][93.037,98.456]
chrY:10983604-11199747[93.815][96.545] chr9:66151542-66366540[99.355][99.548] chr9:63607317-63822314[98.497][98.297]
chr9:40009262-40224435[98.767][99.319]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22.
9 Failed 65 104 None None None None None 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 19 1 0 0 0
11 Failed 59 140 None None None None None 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
15 Failed 44 103 None None None None None 15 0 0 0 0 0 0 0 0 0 1 15 0 0 0 0 0 0 0 0 0 0 0
19 Failed 36 82 None None None None None 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
21 Failed 20 50 None None None None None 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
27 Failed 14 66 None None None None None 27 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
28 Failed 11 98 None None None None None 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
29 Failed 11 76 None None None None None 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
34 Failed 5 40 None None None None None 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
37 Failed 4 63 None None None None None 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
39 Failed 4 61 None None None None None 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
40 Failed 4 82 None None None None None 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
41 Failed 4 46 None None None None None 41 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
1 MultipleAsm 478 687 93.37 27113 99.26 58825 copy7 1 0 0 43 1 77 5 5 5 0 1 1 0 0 0 7 0 0 0 0 0 0 0
10 MultipleAsm 60 250 94.41 35611 99.64 29280 copy4 10 0 19 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
18 MultipleAsm 37 161 94.93 19361 99.7 41560 copy1 18 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 Success 227 213 92.46 11381 99.94 38176 copy14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 200 0 0 0 0 0 0 0 0
2 Success 366 79 88.6 1965 94.5 10470 copy1 2 1 0 12 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 114 305 94.72 40853 99.85 92582 copy1 3 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 111 549 94.05 54836 99.09 131041 copy2 4 0 6 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 102 166 92.15 11742 99.64 19663 copy9 5 0 0 0 0 0 0 1 0 9 5 1 0 0 0 0 0 0 0 0 0 0 0
6 Success 97 304 93.82 18462 99.78 54708 copy2 6 0 10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Success 71 214 94.27 20093 99.71 68206 copy1 7 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Success 69 88 93.9 8787 99.76 16365 copy17 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 33 0 0 0 0 0
12 Success 56 83 93.98 8885 99.84 16673 copy16 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0
13 Success 51 463 94.1 54391 99.67 129722 copy2 13 0 3 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Success 50 146 92.4 17061 99.51 32708 copy11 14 0 0 0 1 0 0 2 1 1 0 22 0 0 0 0 0 0 0 0 0 0 0
16 Success 38 92 94.5 13292 99.75 24011 copy7 16 0 0 0 0 2 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 Success 37 128 94.15 11444 99.37 27620 copy4 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
20 Success 26 132 92.95 9806 99.89 40134 copy4 20 0 3 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
22 Success 20 103 93.79 13399 99.59 24640 copy9 22 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0
23 Success 19 230 94.61 33357 99.45 84460 copy4 23 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
24 Success 18 122 94.08 14231 99.27 38462 copy3 24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
25 Success 17 130 94.0 11448 99.84 27614 copy4 25 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
26 Success 16 134 93.06 10159 99.46 41617 copy3 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
30 Success 9 123 93.26 22412 99.66 37088 copy2 30 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
31 Success 7 100 92.92 6422 99.6 29234 copy2 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
32 Success 7 78 93.58 15786 99.82 36996 copy4 32 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
33 Success 5 40 94.39 6904 99.88 11530 copy21 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0
35 Success 5 63 92.49 24820 99.82 44632 copy4 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
36 Success 5 85 93.99 25729 99.84 52917 copy4 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
38 Success 4 77 94.71 12181 99.64 29193 copy3 38 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0