001373F.200.28900 collpase from CHM1
region: 001373F.200.28900
copies: 21
number of assemblies: 6
number of CC groups: 20
Regions in reference:
chr1:144759803-145002366[90.823][99.512] chr1:143958142-144200904[91.919][99.365] chr2:90200511-90431125[89.599,89.721][89.599,97.597]
chr2:91372368-91596539[96.190,93.353][96.190,98.643] chr1:121277681-121496638[95.437,95.000,94.950,96.731][95.437,95.000,94.950,99.142] chr1:206296395-206509977[99.284][99.344]
chr2:91934003-92148449[96.238][97.461] chr2:91704323-91918766[93.353,96.238][98.643,97.461] chr9:40541305-40756436[98.767][99.319]
chr9:65657718-65871952[99.355][99.548] chr9:65149540-65363792[99.587][99.587] chr9:64664535-64879966[99.137][99.121]
chr2:94164533-94378366[97.107][97.856] chr10:42072395-42286308[97.229,96.474,95.471][97.761,96.049,96.848] chr9:63340524-63555844[99.374,98.497][99.458,98.297]
chrY:11373250-11586362[99.338,99.338,98.484,90.543][99.338,98.593,99.149,96.034] chr2:36819917-37031947[95.702,95.683][95.702,95.338] chrY:26347010-26558521[94.407,90.010,90.208,90.587,94.859,97.130,91.141][95.199,90.010,90.208,90.587,95.365,96.625,95.628]
chr22:10466884-10677152[99.367][99.134] chr9:43174935-43386646[90.617,99.935,98.191,98.246][92.260,97.848,97.968,98.203] chr21:8489980-8700155[98.025][99.310]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21.
0 Failed 5 65 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Failed 24 66 None None None None None 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
2 Failed 248 116 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 23 0 0 0
4 Failed 61 80 None None None None None 4 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 1 0 0 0 0 0
6 Failed 50 75 None None None None None 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0
7 Failed 22 92 None None None None None 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
8 Failed 43 144 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0
11 Failed 16 76 None None None None None 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
12 Failed 14 104 None None None None None 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Failed 9 92 None None None None None 13 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Failed 8 86 None None None None None 14 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0
16 Failed 7 68 None None None None None 16 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
17 Failed 4 51 None None None None None 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
19 Failed 4 75 None None None None None 19 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
3 Success 15 133 97.18 9715 99.79 22498 copy2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 28 72 95.58 11270 97.11 13431 copy14 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
9 Success 37 131 96.72 15137 99.99 30601 copy3 9 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Success 22 79 95.51 6922 100.0 18531 copy5 10 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
15 Success 8 90 96.73 11816 99.62 15784 copy15 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
18 Success 4 57 96.38 11385 97.37 13648 copy14 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0