001792F.200.62500 collpase from CHM1
region: 001792F.200.62500
copies: 11
number of assemblies: 14
number of CC groups: 22
Regions in reference:
chr4:189800606-190066734[93.775,94.261,94.171][93.928,94.598,98.606] chr20:28480061-28738459[97.894,97.666,94.522][97.894,97.666,96.941] chr9:63731480-63993355[99.101,98.497][99.101,98.297]
chr20:28946178-29203400[94.819,97.089][96.391,96.321] chr20:30246083-30499907[93.876,91.797,96.595][96.294,96.631,96.506] chr22:12473893-12727288[89.703,96.123,99.419][89.703,97.574,98.566]
chr20:29379500-29636872[94.921,96.537,97.200,96.222,97.246,92.698][95.524,96.513,97.200,96.266,96.581,93.606] chr9:40858660-41113034[95.392,98.767,94.226][98.787,99.319,94.226] chr22:10838739-11066724[99.842,97.727,98.154][99.842,97.727,98.106]
chr22:12175588-12390884[98.657,99.419][98.685,99.419] chr9:41111431-41323038[95.392,97.765][98.787,99.166]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11.
2 Failed 165 145 None None None None None 2 0 0 0 0 0 0 2 0 0 0 0
7 Failed 81 87 None None None None None 7 0 0 0 0 0 0 76 0 0 0 0
9 Failed 150 78 None None None None None 9 0 0 0 1 0 0 3 0 0 0 0
13 Failed 38 85 None None None None None 13 0 0 0 0 0 0 1 0 0 0 0
17 Failed 12 76 None None None None None 17 0 0 0 0 1 0 0 0 0 0 0
19 Failed 6 86 None None None None None 19 0 0 0 0 0 0 0 0 0 0 0
20 Failed 4 57 None None None None None 20 0 0 0 0 0 0 0 0 0 0 3
21 Failed 4 45 None None None None None 21 0 0 0 0 0 0 0 0 0 0 0
0 Success 258 251 96.65 45622 99.95 53790 copy5 0 0 0 0 0 243 0 0 0 0 0 0
1 Success 198 311 95.45 47969 99.95 66109 copy1 1 189 0 0 0 0 0 0 0 0 0 0
3 Success 30 265 96.59 45605 98.0 57420 copy2 3 0 0 0 0 0 0 0 0 9 0 0
4 Success 56 92 96.47 25651 99.94 38402 copy7 4 0 0 0 0 0 0 51 0 0 0 0
5 Success 26 113 93.67 19678 97.2 25017 copy4 5 0 0 0 0 0 0 0 0 0 0 0
6 Success 136 135 96.4 30208 99.91 36887 copy4 6 0 0 0 131 0 0 0 0 0 0 0
8 Success 206 276 96.53 42539 99.83 53675 copy2 8 0 178 0 0 0 0 0 0 0 0 0
10 Success 140 304 96.67 45654 99.64 52356 copy6 10 0 0 0 1 0 79 1 0 0 6 0
11 Success 90 259 96.81 46326 99.95 61843 copy3 11 0 0 80 0 0 0 0 0 0 0 0
12 Success 54 277 96.0 46369 95.91 58344 copy2 12 0 0 0 0 0 1 3 0 0 0 0
14 Success 29 140 96.31 38224 96.97 46589 copy4 14 0 0 0 1 0 0 0 0 0 0 0
15 Success 17 128 94.95 26581 97.26 33351 copy4 15 0 0 0 0 0 1 1 0 0 0 0
16 Success 16 185 96.7 40078 99.69 53590 copy8 16 0 0 0 0 0 0 0 0 0 0 0
18 Success 10 88 95.42 26090 96.92 31641 copy4 18 0 0 0 0 0 0 0 0 0 0 0