001821F.5400.53800 collpase from CHM1
region: 001821F.5400.53800
copies: 28
number of assemblies: 8
number of CC groups: 12
Regions in reference:
chr2:87205594-87466503[99.874,98.628,99.331][99.088,98.270,99.331] chr2:90129646-90358561[89.599,89.721,90.563][89.599,97.597,98.468] chr2:111425222-111656022[99.331,99.227][99.331,99.227]
chr1:143211900-143436103[95.944][98.696] chr1:144038213-144261675[91.919][99.365] chr1:144704707-144928602[90.823][99.512]
chr9:40481770-40702503[98.767][99.319] chr9:63282730-63501722[99.374][99.458] chr2:94105962-94321842[97.107][97.856]
chr22:22184911-22400520[99.475,94.054,97.015][99.475,94.054,97.074] chr15:20035736-20250789[92.609][98.188] chr15:21042262-21257310[99.252,99.617][97.485,99.475]
chr9:62937614-63153303[99.708,98.827][99.694,98.827] chr2:91458336-91671708[93.353][98.643] chr9:65710775-65925786[99.355][99.548]
chr9:65095903-65310564[99.587][99.587] chr9:64611647-64825735[99.137][99.121] chr22:10528208-10742058[99.367,91.895][99.134,95.916]
chr16:33437544-33650775[99.988][98.963] chr16:32231576-32444731[98.844][99.355] chr21:8551175-8763162[98.025,97.451][99.310,99.202]
chr2:91878853-92091263[96.238][97.461] chr10:42125979-42338269[97.229,96.474,95.471,95.272][97.761,96.049,96.848,95.272] chr15:20199168-20411016[94.097,92.609][95.404,98.188]
chr10:38634502-38846464[89.837,92.425,90.453,90.453,97.131][90.389,92.425,90.453,90.014,97.082] chr16:33604836-33815004[99.988][98.963] chrY:11334025-11544931[99.338,90.543][99.338,96.034]
chr22:16424777-16635056[94.489,97.945,96.257,90.900,97.081][94.489,97.817,96.257,97.456,96.685]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28.
0 Failed 74 172 None None None None None 0 0 0 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Failed 60 72 None None None None None 3 0 0 0 0 0 0 0 0 42 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
5 Failed 2 33 None None None None None 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Failed 33 44 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0
1 Success 79 75 96.79 11445 99.96 12946 copy12 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 69 110 96.81 11981 100.0 24504 copy2 2 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 42 95 96.76 13983 99.99 20000 copy7 4 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Success 50 95 96.53 13809 99.11 20712 copy1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 0
7 Success 10 77 96.58 11961 99.4 12622 copy1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9 Success 8 91 96.64 15412 99.78 24800 copy5 9 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Success 6 43 96.61 10447 98.18 17662 copy1 10 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
11 Success 4 62 96.66 15253 99.99 23298 copy6 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0