001994F.4200.50100 collpase from CHM1
region: 001994F.4200.50100
copies: 16
number of assemblies: 14
number of CC groups: 24
Regions in reference:
chr20:30524532-30781457[93.760,91.797,95.740][93.760,96.631,95.879] chr4:49106990-49346023[98.610,96.392][95.677,98.402] chr22:11790648-12029792[98.657,98.274][98.367,98.873]
chr2:94661956-94914668[97.788][96.538] chr9:97031657-97279569[95.370,94.486][95.370,94.912] chr9:64312123-64563776[99.137][99.121]
chr4:49449432-49685485[98.367][98.151] chr9:33449851-33699938[94.689,93.017,97.956,95.353,95.617,94.259,93.941,93.886,94.883][95.198,93.017,97.956,95.178,95.617,94.259,93.941,93.886,97.072] chr21:13814164-14033420[90.583,91.966,97.906,97.909][90.583,91.966,95.729,98.152]
chr13:18715888-18934963[91.978,91.221,91.461,95.852,99.091][91.978,91.220,91.461,95.838,97.905] chr9:67801826-68020552[99.606][99.484] chr9:42795170-43012408[98.246][98.203]
chr9:64018509-64235013[95.777][95.973] chr4:49386935-49601777[98.367][98.151] chr18:14174395-14390631[94.581][97.126]
chr21:9263178-9477143[96.666][99.551]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15.
0 Failed 11 59 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
3 Failed 22 78 None None None None None 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Failed 50 92 None None None None None 6 0 0 0 0 1 0 0 1 0 0 32 0 0 0 0
8 Failed 84 98 None None None None None 8 0 0 0 52 0 0 0 0 0 0 0 0 0 0 0
11 Failed 23 96 None None None None None 11 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
14 Failed 20 121 None None None None None 14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
15 Failed 13 56 None None None None None 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
16 Failed 12 107 None None None None None 16 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0
19 Failed 6 53 None None None None None 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
22 Failed 4 72 None None None None None 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 355 118 94.51 29830 95.97 46254 copy1 1 5 1 1 28 9 2 0 7 0 0 1 0 0 0 0
2 Success 304 209 94.25 36944 95.85 56086 copy1 2 4 4 0 7 7 2 0 2 0 0 0 83 0 0 1
4 Success 169 136 94.15 38295 99.88 42059 copy15 4 0 0 0 0 0 0 0 0 1 0 0 0 0 74 0
5 Success 18 81 94.84 15561 99.6 18489 copy6 5 0 0 0 0 0 10 0 1 0 0 0 0 0 0 0
7 Success 37 118 94.22 37626 95.55 56005 copy1 7 0 0 1 1 1 0 0 1 0 0 0 0 0 1 0
9 Success 55 239 93.16 37116 95.52 56889 copy1 9 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0
10 Success 34 116 94.15 27891 95.52 39454 copy1 10 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0
12 Success 22 109 95.08 12380 95.85 14306 copy1 12 0 0 0 0 2 0 0 0 3 0 0 0 0 0 0
13 Success 20 110 92.95 27241 95.54 41084 copy1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 Success 10 76 94.97 23268 97.91 25407 copy3 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
18 Success 8 97 94.22 28161 95.53 44007 copy1 18 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
20 Success 5 117 95.0 16187 99.37 19094 copy6 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
21 Success 4 80 93.61 25092 96.87 33879 copy14 21 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
23 Success 4 70 94.56 22012 98.42 27306 copy3 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0