002020F.6300.41000 collpase from CHM1
region: 002020F.6300.41000
copies: 14
number of assemblies: 3
number of CC groups: 4
Regions in reference:
chr20:30728422-30972210[94.094,95.740][96.167,95.879] chr20:29683846-29924822[97.246,90.954,92.327][96.581,92.580,95.135] chrY:10005061-10250091[89.998,89.574][90.367,93.277]
chr22:11204413-11449513[98.572,91.797][98.572,96.946] chr20:29246296-29489429[94.921,96.222,92.698][95.524,96.266,93.606] chr22:11447351-11678181[98.572,96.915][98.572,96.803]
chr12:34066893-34287591[94.336,95.113,91.112,89.633,90.943,94.370][94.335,95.113,91.558,90.470,91.392,94.370] chr12:38082700-38301627[90.486,95.872,91.693,95.339][93.064,95.872,90.343,95.339] chr3:75591144-75807454[94.707,96.501][95.102,94.790]
chr4:189884810-190103658[93.775,94.261,94.171][93.928,94.598,98.606] chr3:198014074-198234596[93.763,89.132,90.492,91.983,90.773,90.042,89.813,93.964][93.763,89.132,90.492,91.104,90.773,90.083,89.813,99.010] chrY:17424170-17638269[99.979][99.979]
chrY:18267742-18481841[95.996,99.977][99.952,99.977] chr1:779261-990920[91.064,94.247,98.521,96.239,93.775,99.517][91.078,94.247,97.913,95.689,93.676,99.342]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14.
0 Failed 169 136 None None None None None 0 0 19 0 26 0 0 0 0 1 1 0 1 0 0
1 Success 40 120 93.7 27981 99.86 40980 copy1 1 22 0 2 1 0 1 0 0 1 0 0 0 0 0
2 Success 84 86 92.51 22593 94.56 36221 copy1 2 0 0 11 1 2 0 0 2 0 0 1 0 0 0
3 Success 6 79 94.54 15547 99.8 29919 copy4 3 0 0 0 6 0 0 0 0 0 0 0 0 0 0