002088F.25400.35100 collpase from CHM1
region: 002088F.25400.35100
copies: 21
number of assemblies: 1
number of CC groups: 11
Regions in reference:
chr2:241995480-242193529[95.116,90.716,93.212,95.116,98.794,97.221][95.116,90.716,92.897,95.116,98.939,97.606] chr8:313668-536507[97.802,94.247,97.221][97.802,94.247,97.384] chr1:704998-917292[94.247,98.521,96.239,93.775,99.517][94.247,97.913,95.689,93.676,99.342]
chr19:80889-293490[99.686][99.452] chr1:223835052-224047840[90.527,91.890,98.374][90.527,91.890,98.512] chr1:242937601-243150030[97.017,97.215,98.294][97.017,98.243,98.294]
chr5:181231603-181443903[94.801][99.401] chr1:375047-587347[99.795,99.517][99.790,99.342] chr6:30223-242522[94.107,99.457][94.508,99.413]
chr1:610025-822344[94.247,99.517][94.247,99.342] chr16:90075579-90287891[92.792,95.699,99.501][92.792,97.015,99.439] chr11:11276-223564[99.692][99.511]
chr1:19036-231360[99.197][99.506] chr20:64192747-64405037[90.662,91.258][90.662,98.572] chr10:38355546-38567845[91.808,93.061,98.518][91.808,96.110,98.082]
chr9:138184110-138394717[96.850][98.868] chr4:118538551-118750794[97.999,98.236][98.309,98.268] chrY:24180904-24393167[99.956][99.793]
chrY:25276979-25489242[99.956][99.793] chr1:223929903-224141107[98.374][98.512] chr8:90402-301012[97.394,97.802,99.578][98.106,97.802,99.136]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20.
0 Failed 14 52 None None None None None 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
2 Failed 22 55 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0
3 Failed 10 57 None None None None None 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Failed 6 50 None None None None None 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
5 Failed 3 63 None None None None None 5 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Failed 8 57 None None None None None 6 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1
7 Failed 7 68 None None None None None 7 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
8 Failed 6 50 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9 Failed 5 47 None None None None None 9 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0
10 Failed 4 52 None None None None None 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 17 73 98.65 22326 98.95 12778 copy20 1 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0