002089F.3100.34300 collpase from CHM1
region: 002089F.3100.34300
copies: 28
number of assemblies: 5
number of CC groups: 11
Regions in reference:
chr15:20174132-20411291[94.097,92.609][95.404,98.188] chr16:33439013-33679644[99.988][98.963] chr16:32233291-32464194[98.844][99.355]
chr10:38612672-38846020[89.837,92.425,90.453,90.453,97.131][90.389,92.425,90.453,90.014,97.082] chr22:16402780-16635064[94.489,97.945,96.257,90.900,97.081][94.489,97.817,96.257,97.456,96.685] chr2:91856911-92090854[96.238][97.461]
chrY:11312025-11544923[99.338,90.543][99.338,96.034] chr22:28575662-28796383[94.877][95.683] chr10:42126409-42342936[97.229,96.474,95.471,95.272][97.761,96.049,96.848,95.272]
chr22:11040557-11260921[98.154,99.937,91.797][98.106,99.937,96.946] chr2:87250053-87461877[99.874,98.628,99.331][99.088,98.270,99.331] chr2:91458697-91670451[93.353][98.643]
chr1:143213953-143426135[95.944][98.696] chr1:144039755-144251515[91.919][99.365] chr2:90146301-90358094[89.599,89.721,90.563][89.599,97.597,98.468]
chr22:10529786-10741563[99.367,91.895][99.134,95.916] chr22:22185386-22397140[99.475,94.054,97.015][99.475,94.054,97.074] chr21:8552675-8764434[98.025,97.451][99.310,99.202]
chr2:94109637-94321351[97.107][97.856] chr1:144715047-144926368[90.823][99.512] chr9:40485319-40697170[98.767][99.319]
chr15:20035871-20247166[92.609][98.188] chr9:65097113-65308756[99.587][99.587] chr9:65713162-65924589[99.355][99.548]
chr15:21042397-21253706[99.252,99.617][97.485,99.475] chr9:63286290-63497722[99.374][99.458] chr9:62940789-63152193[99.708,98.827][99.694,98.827]
chr9:64612796-64824208[99.137][99.121]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28.
0 Failed 35 55 None None None None None 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Failed 5 61 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Failed 39 52 None None None None None 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Failed 81 67 None None None None None 7 0 0 0 0 0 0 1 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 Failed 20 35 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
10 Failed 4 62 None None None None None 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 178 180 96.26 18720 99.97 40284 copy2 1 0 123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
3 Success 28 80 97.19 16546 98.79 31416 copy6 3 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 19 112 96.37 19050 99.67 37143 copy1 4 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 13 58 96.71 18273 99.2 34082 copy2 5 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9 Success 9 73 96.25 18486 96.31 34088 copy6 9 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0