002173F.3200.32000 collpase from CHM1
region: 002173F.3200.32000
copies: 20
number of assemblies: 9
number of CC groups: 19
Regions in reference:
chr9:63251340-63481756[99.374][99.458] chr9:65725783-65960490[99.355][99.548] chr9:65061057-65295906[99.587][99.587]
chr9:64559285-64811650[99.137][99.121] chr9:40454932-40680812[98.767][99.319] chr2:94084581-94305009[97.107][97.856]
chr9:62953300-63171673[99.708,98.827][99.694,98.827] chr16:33588830-33803865[99.988][98.963] chr15:20051761-20266931[92.609][98.188]
chr15:21058282-21273449[99.252,99.617,95.331][97.485,99.475,99.589] chr10:42714882-42929904[95.119,92.276,91.416,90.976,91.251,92.791,98.327,91.769,95.638][94.969,92.276,91.416,91.039,91.805,92.791,98.327,95.079,95.598] chr22:22201482-22415116[99.475,94.054,94.054,97.015][99.475,94.054,94.054,97.074]
chr18:15270082-15482102[95.198][97.336] chr2:132098290-132309708[90.170,97.496][95.758,97.015] chr22:15110777-15327704[99.578][99.488]
chr14:18179982-18396914[91.836][99.173] chr22:15985145-16196080[97.485,94.666][97.485,95.736] chr15:19738383-19949176[93.271][96.069]
chr9:64825649-65035959[99.137][99.121] chr9:40704849-40915074[98.767,94.226][99.319,94.226]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20.
1 Failed 12 61 None None None None None 1 0 0 0 0 0 0 0 0 0 0 8 1 0 0 0 0 0 0 0 0
2 Failed 2 50 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
4 Failed 2 46 None None None None None 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
5 Failed 120 78 None None None None None 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Failed 57 84 None None None None None 6 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
8 Failed 41 60 None None None None None 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
17 Failed 6 94 None None None None None 17 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0
18 Failed 4 71 None None None None None 18 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
0 MultipleAsm 16 134 97.37 17256 97.18 18863 copy14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1
12 MultipleAsm 35 121 96.24 8552 99.99 15161 copy9 12 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
3 Success 11 131 95.37 10679 99.98 14725 copy14 3 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 0 1
7 Success 52 151 95.66 9853 99.66 19354 copy16 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 3 0 0 1 1
9 Success 41 71 96.23 7730 99.97 11030 copy18 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0
10 Success 39 117 94.55 11796 99.79 17975 copy7 10 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7
11 Success 35 167 97.05 23814 99.33 55785 copy4 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Success 25 83 94.14 14186 99.47 28739 copy19 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19
14 Success 18 81 94.95 11444 99.81 15188 copy19 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0
15 Success 17 167 96.97 22096 99.83 27940 copy1 15 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
16 Success 9 64 96.25 8552 100.0 15161 copy9 16 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0