002215F.600.11600 collpase from CHM1
region: 002215F.600.11600
copies: 26
number of assemblies: 6
number of CC groups: 21
Regions in reference:
chr17:21714103-21934847[94.888,93.722,95.630,97.754][94.888,93.722,95.318,97.609] chr17:21683969-21895850[94.888,93.722,95.630,97.754][94.888,93.722,95.318,97.609] chr18:15072356-15284173[95.198][97.336]
chr21:8459266-8671281[98.025,99.997][99.310,99.849] chr2:131917350-132129115[97.496][97.015] chr22:10436178-10648183[99.367][99.134]
chr15:19808221-20020036[92.609,93.271][98.188,96.069] chr1:144518752-144730799[91.919,90.823][99.365,99.512] chr16:32969350-33181371[99.429][99.538]
chr1:144235717-144447765[91.919][99.365] chr1:143194351-143406397[95.944][98.696] chr10:38850975-39062698[98.142,96.000][98.142,95.915]
chr1:143409279-143621110[93.537,95.944][92.624,98.696] chr16:32689028-32901368[99.429][99.538] chr16:34713058-34924883[89.903,89.886,90.040,91.470,89.903,91.470,95.335,93.179][89.903,89.886,90.040,91.470,89.903,91.470,95.918,96.099]
chr16:32026109-32238452[98.844][99.355] chr2:91323437-91534955[96.190,93.353][96.190,98.643] chr7:60901450-61114161[92.671,92.039,90.484,99.701,92.671,92.445][92.671,91.323,90.720,99.569,95.592,95.177]
chr2:90268011-90479530[89.721][97.597] chr7:57967779-58179428[92.852,94.444][92.852,95.606] chr7:60838394-61049895[92.671,92.039,90.484,99.701,92.671][92.671,91.323,90.720,99.569,95.592]
chr7:57754676-57966063[95.067,93.738][97.657,95.681] chr16:36009684-36221392[89.763,89.763,96.485,94.296,94.868][89.763,89.763,96.148,95.511,95.660] chr7:62184068-62395293[98.541,99.701,95.320][98.541,98.405,95.695]
chr17:26871417-27081693[90.570,92.756,89.824,96.000][90.570,92.463,89.824,96.285] chr7:62258864-62469227[98.541,95.681,99.701,95.320][98.541,94.463,98.405,95.695]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25.
0 Failed 31 83 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Failed 21 40 None None None None None 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 2 0 0 0 0 0 0
3 Failed 45 51 None None None None None 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
7 Failed 50 46 None None None None None 7 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 3 0 0 1 0 0 0
9 Failed 34 78 None None None None None 9 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0
10 Failed 32 66 None None None None None 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0
11 Failed 30 38 None None None None None 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0
12 Failed 26 36 None None None None None 12 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
13 Failed 21 56 None None None None None 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
15 Failed 11 101 None None None None None 15 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
16 Failed 6 76 None None None None None 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
18 Failed 6 59 None None None None None 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
19 Failed 5 41 None None None None None 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0
17 MultipleAsm 6 57 95.95 11155 99.9 12007 copy21 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
20 MultipleAsm 4 51 96.08 10186 99.87 10180 copy3 20 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 33 42 95.68 8120 96.27 8212 copy8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0
4 Success 10 40 95.72 11184 99.9 12000 copy21 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 63 67 95.63 10533 97.35 10682 copy9 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0
6 Success 62 76 95.64 12054 98.05 16214 copy2 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0
8 Success 49 61 95.52 11039 96.38 11002 copy17 8 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 2 1 0 1 0 0 0
14 Success 14 76 96.81 10094 98.18 10061 copy17 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0