002616F.300.15000 collpase from CHM1
region: 002616F.300.15000
copies: 17
number of assemblies: 6
number of CC groups: 15
Regions in reference:
chr21:13804473-14020137[90.583,91.966,97.906,97.909][90.583,91.966,95.729,98.152] chr13:18706019-18921659[91.978,91.221,95.852,99.091][91.978,91.220,95.838,97.905] chr18:14139838-14355556[90.706,97.906,94.581][90.706,97.233,97.126]
chr22:11800565-12016257[98.657][98.367] chr20:30549777-30768066[93.760,91.797,95.740][93.760,96.631,95.879] chr9:40179093-40395206[98.767][99.319]
chr9:64325308-64541431[99.137][99.121] chr2:94685183-94901310[97.788][96.538] chr9:65981121-66197213[99.355][99.548]
chr9:42808430-43025382[98.246][98.203] chr21:9263161-9477142[96.666][99.551] chr4:49132030-49346023[98.610,96.392][95.677,98.402]
chr4:49449432-49663405[98.367][98.151] chr9:38466139-38680439[96.363][96.270] chr9:97050603-97265114[95.370,94.486][95.370,94.912]
chr9:33463946-33678113[94.689,93.017,97.956,95.353,95.617,94.259,93.941,93.886,94.883][95.198,93.017,97.956,95.178,95.617,94.259,93.941,93.886,97.072] chr8:43401289-43615710
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17.
0 Failed 59 109 None None None None None 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0
6 Failed 10 42 None None None None None 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
7 Failed 8 47 None None None None None 7 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
9 Failed 7 49 None None None None None 9 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
10 Failed 5 43 None None None None None 10 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 1
12 Failed 4 64 None None None None None 12 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0
13 Failed 4 74 None None None None None 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
14 Failed 4 52 None None None None None 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
8 MultipleAsm 7 53 93.69 14752 99.9 18223 copy5 8 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 2 57 94.66 13115 98.45 13583 copy4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Success 33 84 94.05 14811 98.53 15590 copy4 2 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 1
3 Success 18 69 94.17 15041 99.84 15617 copy1 3 8 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Success 16 54 94.1 15194 99.99 15698 copy3 4 0 1 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Success 11 52 93.83 13960 99.61 13956 copy13 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0
11 Success 5 51 93.73 13967 98.98 13977 copy12 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0