002716F.1800.11000 collpase from CHM1
region: 002716F.1800.11000
copies: 24
number of assemblies: 2
number of CC groups: 7
Regions in reference:
chr5:181209857-181423495[94.801][99.401] chr1:637176-850452[94.247,98.521,99.517][94.247,97.913,99.342] chr1:395455-608740[99.795,99.517][99.790,99.342]
chr3:198104630-198295559[90.773,93.964][90.773,99.010] chr11:31930-245212[99.692][99.511] chr17:0-183014[99.234][99.289]
chr19:102219-315522[94.760,94.760,99.686][94.760,94.760,99.452] chr16:90052330-90265609[92.792,95.699,99.501][92.792,97.015,99.439] chr1:223852849-224068355[90.527,91.890,98.374][90.527,91.890,98.512]
chr1:242957827-243173347[97.215,98.294][98.243,98.294] chr1:222377731-222595838[97.663][98.072] chr4:118514353-118729875[97.999,98.236][98.309,98.268]
chr10:38331489-38547257[91.808,93.061,98.518][91.808,96.110,98.082] chr4:119310695-119526213[98.006,97.620][98.006,97.833] chr7:128535124-128750631[97.067][97.141]
chr7:39675649-39891181[92.250,90.390,92.429,99.563,96.855,97.442][92.250,90.470,92.878,98.189,96.898,97.469] chr7:56279091-56494862[92.977,95.021,90.663,89.347,96.848,90.323][92.977,95.021,90.663,89.348,97.020,90.656] chr7:51293286-51509060[90.016][97.174]
chr1:39468-250143[99.197][99.506] chr9:138167335-138377972[96.850][98.868] chr7:45692835-45906926[97.328][96.958]
chr7:55648618-55863031[90.885,89.975,91.921,97.547,95.154,90.666,91.690,97.912][90.885,89.975,91.921,97.546,96.517,90.666,91.690,97.921] chr7:65721498-65937627[96.403,90.556,96.905,92.922,89.846][95.013,90.042,96.905,98.759,90.082] chr11:49979134-50194617[90.339,93.493,94.772,89.972,97.150][90.412,93.380,94.173,90.134,94.535]
Group Stats:
CC_ID Status numOfPSVs reads avePerID aveLen bestPerID bestLen BestInRef copy=> 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24.
0 Failed 2 56 None None None None None 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
2 Failed 15 76 None None None None None 2 0 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
4 Failed 8 66 None None None None None 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
5 Failed 4 70 None None None None None 5 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
6 Failed 4 50 None None None None None 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
1 Success 24 122 97.84 9702 99.21 9668 copy10 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 2 0 0 0 0 0 2
3 Success 10 70 97.08 14345 99.53 13193 copy3 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0