include augustus.txt
include splices.txt
include consensus.txt
include evaluation.txt
include transmap.txt
include filtered_transmap.txt


track hubCentral
compositeTrack on
shortLabel Cactus
longLabel Cactus Alignment Tracks
group cat_tracks
subGroup1 view Track_Type Snake=Alignments
subGroup2 orgs Organisms acahirinus=acahirinus mmusculus=mmusculus mmusculusref=mmusculusref
dragAndDrop subTracks
dimensions dimensionX=view dimensionY=orgs
noInherit on
priority 0
centerLabelsDense on
visibility full
type bigBed 3

    track hubCentralAlignments
    shortLabel Alignments
    view Alignments
    visibility full
    subTrack hubCentral

        track snakeacahirinus
        longLabel acahirinus
        shortLabel acahirinus
        otherSpecies acahirinus
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../mouse.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=acahirinus

        track snakemmusculus
        longLabel mmusculus
        shortLabel mmusculus
        otherSpecies mmusculus
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../mouse.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=mmusculus

        track snakemmusculusref
        longLabel mmusculusref
        shortLabel mmusculusref
        otherSpecies mmusculusref
        visibility full
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../mouse.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=mmusculusref