Index of /help/glogsdon/Shared
Name
Last modified
Size
Description
Parent Directory
-
mPonAbe1.hap1hap2.ALR.500kbp.chrY.fa
2024-07-02 16:16
4.2M
bonobo_barcode24.6mA.filtered.no0.bedgraph
2024-06-21 04:55
32M
bonobo_barcode23.6mA.filtered.no0.bedgraph
2024-06-21 04:55
9.0M
bonobo_barcode22.6mA.filtered.no0.bedgraph
2024-06-21 04:55
16M
bonobo_barcode24.6mA.filtered.bedgraph
2024-06-21 04:11
22G
bonobo_barcode23.6mA.filtered.bedgraph
2024-06-21 04:10
15G
bonobo_barcode22.6mA.filtered.bedgraph
2024-06-21 04:10
18G
mGorGor1.hap1hap2.cur.20231122.fa
2024-04-01 07:29
6.5G
mPanPan1.winnowmap.dip.ONT.pri.filter.bedgraph
2024-02-12 08:50
2.5G
chm1_human_genome_assembly.fa
2023-09-04 18:10
2.8G
AS-HOR-vs-chrY.track.bed
2022-08-25 13:50
160K
HG002_CAvsInput_losalt.rpkm.ratio.1kbp.minQ1.chrY.bedgraph
2022-07-19 06:18
107M
HG002_CAvsInput_losalt.readcount.ratio.1kbp.minQ1.chrY.bedgraph
2022-07-19 06:18
107M
HG002_CAvsInput_losalt.rpkm.ratio.1kbp.minQ1.bw
2022-07-19 06:10
24M
HG002_CAvsInput_losalt.rpkm.ratio.1kbp.minQ1.bedgraph
2022-07-19 06:10
107M
HG002_CAvsInput_losalt.readcount.ratio.5kbp.minQ1.bw
2022-07-19 06:10
5.5M
HG002_CAvsInput_losalt.readcount.ratio.1kbp.minQ1.bw
2022-07-19 06:10
24M
HG002_CAvsInput_losalt.readcount.ratio.1kbp.minQ1.bedgraph
2022-07-19 06:10
107M
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852.sort.mapq1.5kbp.bw
2022-07-19 06:06
3.9M
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852.sort.mapq1.1kbp.bw
2022-07-19 06:06
17M
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852.sort.mapq1.10kbp.bw
2022-07-19 06:06
2.1M
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852.sort.mapq1.bw
2022-07-19 06:06
484M
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852.bigwig
2022-07-18 14:50
574M
MS4221_8q21_verkko_h2_CAvsInput.readCount.ds.ratio.100bp.bedgraph
2022-07-17 07:01
2.9M
MS4221_8q21_verkko_h1_CAvsInput.readCount.ds.ratio.100bp.bedgraph
2022-07-17 06:45
2.8M
CHM13_v1.1_annotation.bed
2022-07-05 21:08
173K
chm13_chm1_cenX.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
764K
chm13_chm1_cen9.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
736K
chm13_chm1_cen8.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
738K
chm13_chm1_cen7.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
749K
chm13_chm1_cen6.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
723K
chm13_chm1_cen5.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
761K
chm13_chm1_cen4.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
752K
chm13_chm1_cen3.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
765K
chm13_chm1_cen2.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
740K
chm13_chm1_cen22.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
748K
chm13_chm1_cen21.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
757K
chm13_chm1_cen20.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
759K
chm13_chm1_cen19.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
752K
chm13_chm1_cen18.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
755K
chm13_chm1_cen17.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
748K
chm13_chm1_cen16.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
749K
chm13_chm1_cen15.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
744K
chm13_chm1_cen14.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
771K
chm13_chm1_cen1.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
743K
chm13_chm1_cen13.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
756K
chm13_chm1_cen12.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
751K
chm13_chm1_cen11.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
743K
chm13_chm1_cen10.40000.10000.facet.equal.facet.all.png
2022-06-30 07:47
758K
aln_plot_adjustedScale_cens.R
2022-06-30 07:41
6.4K
HG03492_chrY.largeregion.5000.30000.facet.equal.facet.all.png
2022-06-30 07:39
740K
aln_plot_adjustedScale.R
2022-06-30 07:36
6.4K
HG002_CAvsInput_losalt.rpkm.ratio.1kbp.minQ1.bedGraph
2022-06-24 08:57
107M
HG002_CAvsInput_losalt.readcount.ratio.1kbp.minQ1.bedGraph
2022-06-24 08:57
107M
HG002_IgG_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852_meryl-51mer-chm13v2.0-hg002.bigwig
2022-06-24 08:22
213M
HG002_IgG_cutnrun_hisalt_trimmed_q20_2.chm13_v2.F3852_meryl-51mer-chm13v2.0-hg002.bigwig
2022-06-24 08:22
253M
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852_meryl-51mer-chm13v2.0-hg002.bigwig
2022-06-24 08:22
213M
HG002_CA_cutnrun_hisalt_trimmed_q20_2.chm13_v2.F3852_meryl-51mer-chm13v2.0-hg002.bigwig
2022-06-24 08:22
232M
pacbio_chm13v1p1_hg002XYv2p7.HG002.pb-CpG-tools.bw
2022-06-24 08:18
967M
pacbio_chm13v1p1_hg002XYv2p7.HG002.pb-CpG-tools.5kbp.bw
2022-06-24 08:18
5.7M
pacbio_chm13v1p1_hg002XYv2p7.HG002.pb-CpG-tools.500bp.bw
2022-06-24 08:18
51M
pacbio_chm13v1p1_hg002XYv2p7.HG002.pb-CpG-tools.1kbp.bw
2022-06-24 08:18
27M
pacbio_chm13v1p1_hg002XYv2p7.HG002.pb-CpG-tools.10kbp.bw
2022-06-24 08:18
2.9M
nanopore_CHM13v2.7_CpG.bw
2022-06-24 08:18
153M
nanopore_CHM13v2.0_CpG.bw
2022-06-24 08:18
153M
nanopore_CHM13v2.0_CpG.5kbp.bw
2022-06-24 08:18
5.8M
nanopore_CHM13v2.0_CpG.500bp.bw
2022-06-24 08:18
53M
nanopore_CHM13v2.0_CpG.200bp.bw
2022-06-24 08:18
104M
nanopore_CHM13v2.0_CpG.1kbp.bw
2022-06-24 08:18
28M
nanopore_CHM13v2.0_CpG.1bp.bw
2022-06-24 08:18
287M
nanopore_CHM13v2.0_CpG.10kbp.bw
2022-06-24 08:18
2.9M
nanopore_CHM13v2.0_CpG.100bp.bw
2022-06-24 08:18
148M
HG002_chrY_cen.bed
2022-06-24 08:13
23
HG002_CA_cutnrun_losalt_trimmed_q20_2.chm13_v2.F3852.sort.mapq1.1kbp.bedGraph
2022-06-24 07:59
17M
HG002_CA_cutnrun_hisalt_trimmed_q20_2.chm13_v2.F3852.sort.mapq1.bw
2022-06-24 06:41
526M
chm1_cens_v21.fa
2022-06-23 08:35
2.8G
CHM1_v19_annotation.bed
2022-06-15 07:41
37M
CHM1_v19.fa
2022-06-15 07:29
2.8G
chm1_verkko.deepconsensus.fa
2022-06-14 08:22
2.9G
chm13_v2.0_chrY_HOR_array.fa.fai
2022-06-04 03:05
42
chm13_v2.0_chr21_HOR_array.fa.fai
2022-06-04 03:05
43
chm13_v2.0_chrY_HOR_array.fa
2022-06-03 12:47
316K
chm13_v2.0_chr21_HOR_array.fa
2022-06-03 12:47
330K
chm13_chrY_v2.0.fa
2022-06-03 12:43
316K
CHM1_Input_2.censv19.bw
2022-05-18 05:56
17M
CHM1_Input_1.censv19.bw
2022-05-18 05:56
17M
CHM1_ChIP_2.censv19.bw
2022-05-18 05:56
15M
CHM1_ChIP_1.censv19.bw
2022-05-18 05:56
16M
CHM1_CAvsInput_2.SES.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_2.readcount.ratio.5kbp.minQ1.bw
2022-04-06 11:54
5.2M
CHM1_CAvsInput_2.readcount.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_2.readcount.ratio.5kbp.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_2.readcount.ratio.1kbp.minQ1.bw
2022-04-06 11:54
22M
CHM1_CAvsInput_2.readcount.ratio.1kbp.ignoreDup.bw
2022-04-06 11:54
23M
CHM1_CAvsInput_2.readcount.ratio.1kbp.bw
2022-04-06 11:54
23M
CHM1_CAvsInput_2.censv18.readcount.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.3M
CHM1_CAvsInput_2.censv18.readcount.ratio.5kbp.bw
2022-04-06 11:54
5.3M
CHM1_CAvsInput_2.censv17.SES.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.3M
CHM1_CAvsInput_2.censv17.readcount.ratio.5kbp.minQ1.bw
2022-04-06 11:54
5.1M
CHM1_CAvsInput_2.censv17.readcount.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_1.SES.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_1.SES.ratio.5kbp.bw
2022-04-06 11:54
5.5M
CHM1_CAvsInput_1.readcount.ratio.5kbp.minQ1.bw
2022-04-06 11:54
5.3M
CHM1_CAvsInput_1.readcount.ratio.5kbp.minQ10.bw
2022-04-06 11:54
5.3M
CHM1_CAvsInput_1.readcount.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.5M
CHM1_CAvsInput_1.readcount.ratio.1kbp.minQ1.bw
2022-04-06 11:54
22M
CHM1_CAvsInput_1.readcount.ratio.1kbp.ignoreDup.bw
2022-04-06 11:54
23M
CHM1_CAvsInput_1.readcount.ratio.1kbp.bw
2022-04-06 11:54
23M
CHM1_CAvsInput_1.censv18.readcount.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_1.censv18.readcount.ratio.5kbp.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_1.censv17.SES.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_CAvsInput_1.censv17.readcount.ratio.5kbp.minQ1.bw
2022-04-06 11:54
5.2M
CHM1_CAvsInput_1.censv17.readcount.ratio.5kbp.ignoreDup.bw
2022-04-06 11:54
5.4M
CHM1_Input_2.censv18.bw
2022-04-05 11:16
16M
CHM1_Input_2.censv17.bw
2022-04-05 11:16
16M
CHM1_Input_2.bw
2022-04-05 11:16
17M
CHM1_Input_1.censv18.bw
2022-04-05 11:16
16M
CHM1_Input_1.censv17.bw
2022-04-05 11:16
16M
CHM1_Input_1.bw
2022-04-05 11:16
17M
CHM1_ChIP_2.censv18.bw
2022-04-05 11:16
15M
CHM1_ChIP_2.censv17.bw
2022-04-05 11:16
15M
CHM1_ChIP_2.bw
2022-04-05 11:16
15M
CHM1_ChIP_1.censv18.bw
2022-04-05 11:16
15M
CHM1_ChIP_1.censv17.bw
2022-04-05 11:16
15M
CHM1_ChIP_1.bw
2022-04-05 11:16
16M
CHM13v1.1_Input_2.bw
2022-03-17 13:29
17M
CHM13v1.1_Input_1.bw
2022-03-17 13:29
17M
CHM13v1.1_CA_ChIP_2.bw
2022-03-17 13:29
14M
CHM13v1.1_CA_ChIP_1.bw
2022-03-17 13:29
14M
chm13v1.1_censplus200kbp.methylation_frequency.bedGraph
2022-03-17 06:15
875K
chm1_censv17_200kbp.methylation_frequency.bedGraph
2022-03-15 16:19
2.3M
clint_cen8_monomers.fa
2022-03-15 10:00
4.1K
CHM13_1_S182.727.cenHORs.v1.0.bed
2022-03-11 13:21
1.0M
h2tg000203l_0-13Mbp.CENP-Bbox.bed
2022-03-06 12:38
669K
h2tg000035l.0-16Mbp.CENP-Bbox.bed
2022-03-06 12:31
19K
h2tg000136l_0-13Mbp.CENP-Bbox.bed
2022-03-06 12:31
12K
HG002.cur.20211005.selectcens.fa
2022-02-23 10:57
1.4G
h2tg000035l.fa
2022-02-15 23:10
22M
hifi2hg002cur_mat_cens.greaterthan1Mbp.png
2022-02-15 23:02
11M
hifi2hg002cur_pat_cens.greaterthan1Mbp.png
2022-02-15 23:02
11M
hifi2hg002cur_pat_cens.SY.png
2022-02-15 23:02
380K
chm1_cens_v16_2_chm13t2tv1.1.bed
2022-02-15 09:30
284K
chm1_cens_v16.fa
2022-02-15 09:29
2.8G
h2tg000203l_0-13Mbp.B.90.bedGraph
2022-02-09 17:40
318K
h2tg000203l_0-13Mbp.A.90.bedGraph
2022-02-09 17:40
761K
chm1_cen18v3.fa.fai
2022-02-09 07:19
43
chm1_cen18v3.fa
2022-02-09 07:19
77M
chm1_cens_v15.fa.fai
2022-02-09 07:18
1.1K
chm1_cens_v15.fa
2022-02-09 07:18
1.7G
chm1_hifi2censv15.cen18v3.bam.bai
2022-02-09 07:12
58K
chm1_hifi2censv15.cen18v3.bam
2022-02-09 07:12
175M
pi-satellite2paharihifiasm.bed
2022-02-01 12:28
6.7K
Pahari_Input_4.bw
2022-01-31 19:08
15M
Pahari_Input_3.bw
2022-01-31 19:08
16M
Pahari_Input_1.bw
2022-01-31 19:08
17M
Pahari_CENPA_4.bw
2022-01-31 19:08
13M
Pahari_CENPA_3.bw
2022-01-31 19:08
14M
Pahari_CENPA_1.bw
2022-01-31 19:08
15M
ape_cens.fa
2022-01-30 19:47
49M
HG002.pat.cur.20211005.rm.all.ALR.bed
2022-01-30 17:10
371K
HG002.mat.cur.20211005.rm.all.ALR.bed
2022-01-30 17:10
374K
HG002.pat.cur.20211005.rm.all.ALR.collapsed.bed
2022-01-30 17:04
4.6K
HG002.mat.cur.20211005.rm.all.ALR.collapsed.bed
2022-01-30 17:04
4.9K
Susie_PAB_hifiasmv0.16.1_2.bed
2022-01-27 06:39
2.5M
Susie_PAB_hifiasmv0.16.1_1.bed
2022-01-27 06:39
2.5M
Susie_PAB_hicanu_2.bed
2022-01-27 06:39
4.6M
Susie_PAB_hicanu_1.bed
2022-01-27 06:39
4.6M
sby4958_t40_hybcap2.2308.bin1.bw
2022-01-16 08:01
161K
sby4958_t40_hybcap1.2308.bin1.bw
2022-01-16 08:01
249K
sby4958_t0_hybcap2.2308.bin1.bw
2022-01-16 08:01
221K
sby4958_t0_hybcap1.2308.bin1.bw
2022-01-16 08:01
210K
sby3_t40_hybcap2.2308.bin1.bw
2022-01-16 08:01
266K
sby3_t40_hybcap1.2308.bin1.bw
2022-01-16 08:01
286K
sby3_t0_hybcap2.2308.bin1.bw
2022-01-16 08:01
157K
sby3_t0_hybcap1.2308.bin1.bw
2022-01-16 08:01
220K
sby4958_t40_input2.2308.bin1.bw
2022-01-16 07:57
781K
sby4958_t40_input2.2308.bin100.bw
2022-01-16 07:57
112K
sby4958_t40_input1.2308.bin1.bw
2022-01-16 07:57
540K
sby4958_t40_input1.2308.bin100.bw
2022-01-16 07:57
110K
sby4958_t0_input2.2308.bin1.bw
2022-01-16 07:57
860K
sby4958_t0_input2.2308.bin100.bw
2022-01-16 07:57
142K
sby4958_t0_input1.2308.bin1.bw
2022-01-16 07:57
741K
sby4958_t0_input1.2308.bin100.bw
2022-01-16 07:57
140K
sby3_t40_input2.2308.bin1.bw
2022-01-16 07:57
822K
sby3_t40_input2.2308.bin100.bw
2022-01-16 07:57
118K
sby3_t40_input1.2308.bin1.bw
2022-01-16 07:57
823K
sby3_t40_input1.2308.bin100.bw
2022-01-16 07:57
138K
sby3_t0_input2.2308.bin1.bw
2022-01-16 07:57
535K
sby3_t0_input2.2308.bin100.bw
2022-01-16 07:57
101K
sby3_t0_input1.2308.bin1.bw
2022-01-16 07:57
655K
sby3_t0_input1.2308.bin100.bw
2022-01-16 07:57
126K
sby3_t0_input1.2308.bam.bai
2022-01-16 07:37
11K
sby3_t0_input1.2308.bam
2022-01-16 07:37
11M
GSATX_monomer.fa
2022-01-10 11:00
222
GSAT_monomer.fa
2022-01-10 11:00
221
GSATII_monomer.fa
2022-01-10 11:00
220
CHM13.rmskV2.GSATX.greaterthan65.monomers.fa
2022-01-10 10:54
87K
CHM13.rmskV2.GSATII.greaterthan70.monomers.fa
2022-01-10 10:54
200K
CHM13.rmskV2.GSATII.greaterthan60.monomers.fa
2022-01-10 10:54
275K
CHM13.rmskV2.GSATII.60-70.monomers.fa
2022-01-10 10:54
74K
CHM13.rmskV2.GSAT.greaterthan75.monomers.fa
2022-01-10 10:54
221K
GSATX.fa
2022-01-10 10:53
3.6K
GSATII.fa
2022-01-10 10:53
1.0K
GSAT.fa
2022-01-10 10:53
23K
CHM13.rmskV2.GSATX.fa
2022-01-10 10:53
88K
CHM13.rmskV2.GSATII.fa
2022-01-10 10:53
267K
CHM13.rmskV2.GSAT.fa
2022-01-10 10:53
235K
CHM13.rmskV2.GSAT_all.bed
2022-01-10 10:48
21K
CHM13_CAvsInput_2.SES.ratio.5kbp.ignoreDup.bw
2021-12-30 12:12
5.2M
CHM13_CAvsInput_2.readcount.ratio.5kbp.minQ1.bw
2021-12-30 12:12
5.1M
CHM13_CAvsInput_2.readcount.ratio.5kbp.ignoreDup.bw
2021-12-30 12:12
5.2M
CHM13_CAvsInput_2.readcount.ratio.1kbp.minQ1.bw
2021-12-30 12:12
21M
CHM13_CAvsInput_2.readcount.ratio.1kbp.ignoreDup.bw
2021-12-30 12:12
22M
CHM13_CAvsInput_2.readcount.ratio.1kbp.bw
2021-12-30 12:12
22M
CHM13_CAvsInput_2_glchr8v9_43.6-47.2Mbp.readcount.ratio.bw
2021-12-30 12:12
400K
CHM13_CAvsInput_2_glchr8v9_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2021-12-30 12:12
34K
CHM13_CAvsInput_1.SES.ratio.5kbp.ignoreDup.bw
2021-12-30 12:12
5.3M
CHM13_CAvsInput_1.readcount.ratio.5kbp.minQ1.bw
2021-12-30 12:12
5.2M
CHM13_CAvsInput_1.readcount.ratio.5kbp.ignoreDup.bw
2021-12-30 12:12
5.3M
CHM13_CAvsInput_1.readcount.ratio.1kbp.minQ1.bw
2021-12-30 12:12
22M
CHM13_CAvsInput_1.readcount.ratio.1kbp.ignoreDup.bw
2021-12-30 12:12
23M
CHM13_CAvsInput_1.readcount.ratio.1kbp.bw
2021-12-30 12:12
23M
CHM13_CAvsInput_1_glchr8v9_43.6-47.2Mbp.readcount.ratio.bw
2021-12-30 12:12
393K
CHM13_CAvsInput_1_glchr8v9_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2021-12-30 12:12
34K
chm13_v1.0_methylation_freq.bedGraph
2021-12-30 07:14
795K
CHM1_CAvsInput_1.readcount.ratio.5kbp.bw
2021-12-29 17:14
5.5M
BlackLab/
2021-12-29 13:52
-
chm13_v1_methylation_freq_chr8.bedGraph
2021-12-27 14:14
28K
chm13_v1_methylation_freq_chr8.bed
2021-12-27 14:08
28K
chm13_v1_methylation_freq_chr10.bed
2021-12-27 14:08
30K
chm1_censv12_200kbp.methylation.bedGraph
2021-12-27 08:32
1.2G
chm1_censv12_200kbp.methylation.bw
2021-12-27 08:32
828
cen1_monomers.fa
2021-11-23 11:26
1.1K
chm13_cen1.fa
2021-11-23 11:26
5.5M
chm13_ont.primary_meth.cens_200kbp.bam.bai
2021-11-15 17:27
2.8M
chm13_ont.primary_meth.cens_200kbp.bam
2021-11-15 17:27
2.1G
hg002.chrY.v2.fasta
2021-11-10 13:33
60M
Fosmids/
2021-11-04 10:16
-
J3/
2021-10-22 07:22
-
J3.hifiasm.dip.p_utg.gfa
2021-10-19 16:07
7.4G
J3_hifiasm_triobinned_assembly.log
2021-10-19 15:56
33K
defensin_genes_in_hg00733.bam.bai
2021-10-12 16:10
6.1K
defensin_genes_in_hg00733.bam
2021-10-12 16:10
15K
hg00733_defensin_hap1_hap2_trimmed.fa
2021-10-12 16:10
12M
hg00733_defensin_hap1_hap2_trimmed.fa.fai
2021-10-12 16:10
103
CHM13.cenSat.bed
2021-10-07 15:23
157K
CHM13.CATv4LiftOff.bed
2021-10-07 15:23
82M
chrY_hg002_v2_output.bed
2021-09-03 07:34
2.1G
chrX_hg002_v2_output.bed
2021-09-03 07:34
5.4G
210903_NucFreq.all.hets.chrX_chrY_hg002_v2.hifi.greaterThan10.tbl
2021-09-03 07:27
4.3K
210903_chrX_chrY_hg002_v2.mostCommonBase.bw
2021-09-03 07:09
439M
210903_chrX_chrY_hg002_v2.2ndmostCommonBase.bw
2021-09-03 07:08
382M
210903_chrX_chrY_hg002_v2.2ndmostCommonBase.100bp.bw
2021-09-03 07:03
4.7M
210903_chrX_chrY_hg002_v2.mostCommonBase.100bp.bw
2021-09-03 07:03
7.3M
chm1_ont.seqlengths_histogram.pdf
2021-08-13 16:38
17K
For_Travis_Wheeler/
2021-07-19 14:58
-
human_cen8_hor_arrays.fa
2021-07-19 14:57
8.9M
nanopolish/
2021-05-25 12:07
-
glchr8v9.fa
2021-05-14 07:10
139M
CUTnRUN_ChIP_data/
2021-05-06 14:30
-
yeast_cen/
2021-05-05 11:48
-
sacCer3_mm.SBY20363_t0_hybcap_r1.flnc.bw
2021-05-05 10:01
187K
sacCer3_mm.SBY20363_t0_hybcap_r1.flnc.bedGraph
2021-05-05 10:01
368K
sacCer3_mm.SBY20363_t0_hybcap_r1.flnc.bed
2021-05-05 10:01
8.1M
susie_ont_plus_standard_seqlengths.30kbp.seqlengths_histogram.pdf
2021-05-04 08:59
17K
cenSat_Annotations_HORs.v1.0.bed
2021-04-28 09:34
2.2K
cenSat_Annotations.maxmin.v1.0.bed
2021-04-28 09:31
567
210428_allchrs.2ndmostCommonBase.100bp.bw
2021-04-28 07:50
65M
210428_allchrs.mostCommonBase.bw
2021-04-28 07:39
6.0G
210428_allchrs.mostCommonBase.100bp.bw
2021-04-28 07:34
99M
210428_allchrs.2ndmostCommonBase.bw
2021-04-28 07:33
5.3G
sv-lengths-q5.png
2021-04-27 08:17
31K
sv-lengths-q10.png
2021-04-27 08:17
27K
sv-genotypes-q5.png
2021-04-27 08:17
30K
Y208_ont.Q10.seqlengths_histogram.pdf
2021-04-26 12:52
16K
JM120_ont.Q10.seqlengths_histogram.pdf
2021-04-26 12:41
17K
T2P1_ont.Q10.seqlengths_histogram.pdf
2021-04-26 12:32
16K
JM121_ont.seqlengths_histogram.pdf
2021-04-26 12:00
17K
mmu_ont_seqlengths.30kbp.seqlengths_histogram.pdf
2021-04-19 23:57
16K
mmu_ont_seqlengths.lessthan100kbp.seqlengths_histogram.pdf
2021-04-19 23:56
17K
mmu_ont_seqlengths.100kbp.seqlengths_histogram.pdf
2021-04-19 23:55
16K
mmu_ont_seqlengths_histogram.pdf
2021-04-19 23:55
17K
susie_ont_seqlengths_histogram.pdf
2021-04-19 07:20
17K
susie_ont_plus_standard_seqlengths.lessthan100kbp.seqlengths_histogram.pdf
2021-04-19 07:20
17K
susie_ont_plus_standard_seqlengths_histogram.pdf
2021-04-19 07:20
17K
susie_ont_plus_standard_seqlengths.100kbp.seqlengths_histogram.pdf
2021-04-19 07:20
17K
chr18_region_T2T.fa
2021-04-16 10:15
10K
JM120_ont.seqlengths_histogram.pdf
2021-04-16 00:31
17K
chm1.30kbp.seqlengths_histogram.pdf
2021-04-14 13:14
17K
chm1.lessthan100kbp.seqlengths_histogram.pdf
2021-04-14 13:13
17K
chm1.greaterthan100kbp.seqlengths_histogram.pdf
2021-04-14 13:12
17K
210413_allchrs.2ndmostCommonBase.100bp.bw
2021-04-14 07:17
65M
210413_allchrs.mostCommonBase.100bp.bw
2021-04-14 07:16
99M
210413_allchrs.mostCommonBase.bw
2021-04-13 13:18
6.0G
210413_allchrs.2ndmostCommonBase.bw
2021-04-13 09:36
5.3G
ont_plus_standard_clint_fastq.30kbp.seqlengths_histogram.pdf
2021-04-01 07:03
17K
kamillah_ont.seqlengths.30kbp.seqlengths_histogram.pdf
2021-04-01 07:00
17K
kamillah_ont.seqlengths.lessthan100kbp.seqlengths_histogram.pdf
2021-04-01 06:58
17K
kamillah_ont.seqlengths.100kbp.seqlengths_histogram.pdf
2021-04-01 06:57
17K
kamillah_ont.seqlengths_histogram.pdf
2021-03-31 23:54
17K
hifi.png
2021-03-30 12:08
671K
HiCanu_glchr8v9_hifi_region.cen.png
2021-03-30 12:06
652K
mmu_p_utg000032l_hifi.png
2021-03-30 10:55
404K
touch.bed
2021-03-30 10:45
29
output.bed
2021-03-30 10:45
16K
NucPlot.py
2021-03-30 10:45
14K
hifi_assembly_broken.fasta.fai
2021-03-30 10:45
467
hifi_assembly_broken.fasta
2021-03-30 10:45
133M
final.bed
2021-03-30 10:45
204
depth_coverage.tsv
2021-03-30 10:45
3.0G
coverage_40_greater.bed
2021-03-30 10:44
285K
contigs.bed
2021-03-30 10:44
175
cen8.bed
2021-03-30 10:44
57
break.bed
2021-03-30 10:44
29
ccs_readlength_hist_thumb.png
2021-03-23 07:20
4.2K
ccs_readlength_hist.png
2021-03-23 07:20
141K
ccs_npasses_vs_accuracy_thumb.png
2021-03-23 07:20
8.8K
ccs_npasses_vs_accuracy.png
2021-03-23 07:20
263K
ccs_npasses_hist_thumb.png
2021-03-23 07:20
2.7K
ccs_npasses_hist.png
2021-03-23 07:20
82K
ccs_accuracy_hist_thumb.png
2021-03-23 07:20
3.6K
ccs_accuracy_hist.png
2021-03-23 07:20
133K
isoseq3_report.json
2021-03-23 07:09
2.0K
chr8_8q21_organization.txt
2021-03-17 13:22
2.5K
chr8_HORarray_organization.txt
2021-03-17 11:01
80K
AllHumanCens.png
2021-02-25 22:49
1.4M
allchrs.2ndmostCommonBase.bw
2021-02-17 15:35
5.3G
allchrs.mostCommonBase.bw
2021-02-17 14:54
6.0G
chr1_chr10_chr11_test.bw
2021-02-17 10:38
25K
report_FAO80056_20201016_2115_f1a77e3d.pdf
2021-02-08 13:53
109K
AllHumanCens.pdf
2021-02-08 13:28
24M
CHM13_H3K9me3_cutnrun_hisalt.bw
2021-01-13 09:15
311M
CHM13_IgG_cutnrun_losalt.bw
2021-01-13 09:08
302M
CHM13_IgG_cutnrun_hisalt.bw
2021-01-13 09:08
303M
CHM13_H3K9me3_cutnrun_losalt.bw
2021-01-13 09:08
378M
CHM13_H3K4me2_cutnrun_losalt.bw
2021-01-13 09:08
243M
CHM13_H3K4me2_cutnrun_hisalt.bw
2021-01-13 09:08
342M
CHM13_CC_cutnrun_losalt.bw
2021-01-13 09:08
271M
CHM13_CC_cutnrun_hisalt.bw
2021-01-13 09:08
301M
CHM13_CB_cutnrun_losalt.bw
2021-01-13 09:08
312M
CHM13_CB_cutnrun_hisalt.bw
2021-01-13 09:08
301M
CHM13_CA_cutnrun_losalt.bw
2021-01-13 09:08
323M
CHM13_CA_cutnrun_hisalt.bw
2021-01-13 09:08
302M
ms4221_8q21_h2v2_CAvsInput2.readCount.ds.ratio.100bp.bw
2020-12-16 10:42
2.7M
ms4221_8q21_h1v2_CAvsInput2.readCount.ds.ratio.100bp.bw
2020-12-16 10:41
2.6M
hg38.chr_only.SDs.bed.bb
2020-12-02 22:51
4.4M
hg38.chr_only.SDs.bed
2020-12-02 22:50
12M
IMS13q_CAvsInput_43.6-47.2Mbp.readCount.noNorm.ratio.1kbp.bw
2020-12-02 16:41
614K
MS4221_CAvsInput_43.6-47.2Mbp.readCount.noNorm.ratio.1kbp.bw
2020-12-02 16:41
613K
CHM13_CAvsInput_1_43.6-47.2Mbp.noNorm.ratio.1kbp.bw
2020-12-02 16:41
615K
CHM13_CAvsInput_2_43.6-47.2Mbp.noNorm.ratio.1kbp.bw
2020-12-02 16:41
615K
IMS13q_CAvsInput_43.6-47.2Mbp.readCount.ds.ratio.1kbp.bw
2020-12-02 16:19
616K
MS4221_CAvsInput_43.6-47.2Mbp.readCount.ds.ratio.1kbp.bw
2020-12-02 16:18
614K
CHM13_CAvsInput_2_43.6-47.2Mbp.readCount.ds.ratio.1kbp.bw
2020-12-02 16:09
616K
CHM13_CAvsInput_1_43.6-47.2Mbp.readCount.ds.ratio.1kbp.bw
2020-12-02 16:09
616K
CHM13_CAvsInput_1_43.6-47.2Mbp.readCount.noNorm.ratio.1kbp.bw
2020-12-02 15:49
618K
IMS13q_CAvsInput_43.6-47.2Mbp.ds.noNorm.ratio.1kbp.bw
2020-12-02 14:37
616K
MS4221_CAvsInput_43.6-47.2Mbp.ds.noNorm.ratio.1kbp.bw
2020-12-02 14:37
614K
IMS13q_CAvsInput_43.6-47.2Mbp.ds2.noNorm.ratio.1kbp.bw
2020-12-02 14:27
616K
IMS13q_CAvsInput_43.6-47.2Mbp.ds.readcount.ratio.1kbp.bw
2020-12-02 14:06
617K
IMS13q_CAvsInput_43.6-47.2Mbp.noNorm.ratio.1kbp.bw
2020-12-02 13:38
618K
MS4221_CAvsInput_43.6-47.2Mbp.noNorm.ratio.1kbp.bw
2020-12-02 13:38
614K
IMS13q_CAvsInput_43.6-47.2Mbp.readcount.log2ratio.1kbp.bw
2020-12-02 13:30
577K
MS4221_CAvsInput_43.6-47.2Mbp.RPKM.ratio.1kbp.bw
2020-12-02 13:06
616K
IMS13q_CAvsInput_43.6-47.2Mbp.RPKM.ratio.1kbp.bw
2020-12-02 13:06
619K
MS4221_Input.glchr8v9_43.6-47.2Mbp.bw
2020-12-02 12:04
720K
MS4221_CA.glchr8v9_43.6-47.2Mbp.bw
2020-12-02 12:04
359K
IMS13q_Input.glchr8v9_43.6-47.2Mbp.bw
2020-12-02 12:04
620K
IMS13q_CA.glchr8v9_43.6-47.2Mbp.bw
2020-12-02 12:04
4.4M
CHM13_Input_2.bw
2020-12-01 11:28
423M
CHM13_Input_1.bw
2020-12-01 11:28
408M
CHM13_CA_ChIP_2.bw
2020-12-01 11:28
222M
CHM13_CA_ChIP_1.bw
2020-12-01 11:28
241M
CHM13_CAvsInput_2.glchr8v9_43.6-47.2Mbp.readcount.ratio.bw
2020-11-28 10:13
1.0M
CHM13_CAvsInput_2.glchr8v9_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-11-28 10:13
618K
CHM13_CAvsInput_2_43.6-47.2Mbp.readcount.ratio.bw
2020-11-28 10:13
1.0M
CHM13_CAvsInput_2_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-11-28 10:13
618K
CHM13_CAvsInput_1.glchr8v9_43.6-47.2Mbp.readcount.ratio.bw
2020-11-28 10:13
1.0M
CHM13_CAvsInput_1.glchr8v9_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-11-28 10:13
618K
CHM13_CAvsInput_1_43.6-47.2Mbp.readcount.ratio.bw
2020-11-26 21:35
393K
CHM13_CAvsInput_1_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-11-26 21:35
34K
CHM13_CA_ChIP_1.chr8_43.6-47.2Mbp.bam.bai
2020-11-26 07:09
29K
CHM13_CA_ChIP_1.chr8_43.6-47.2Mbp.bam
2020-11-26 07:09
107M
CHM13_CAvsInput_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-11-26 07:06
34K
CHM13_Input_2_trimmed_R2_q20_val_2_fastqc.html
2020-11-25 08:12
245K
CHM13_Input_2_trimmed_R1_q20_val_1_fastqc.html
2020-11-25 08:12
248K
CHM13_Input_1_trimmed_R2_q20_val_2_fastqc.html
2020-11-25 08:12
244K
CHM13_Input_1_trimmed_R1_q20_val_1_fastqc.html
2020-11-25 08:12
246K
CHM13_CA_ChIP_2_trimmed_R2_q20_val_2_fastqc.html
2020-11-25 08:12
266K
CHM13_CA_ChIP_2_trimmed_R1_q20_val_1_fastqc.html
2020-11-25 08:12
265K
CHM13_CA_ChIP_1_trimmed_R2_q20_val_2_fastqc.html
2020-11-25 08:12
261K
CHM13_CA_ChIP_1_trimmed_R1_q20_val_1_fastqc.html
2020-11-25 08:12
268K
CHM13_Input_2_trimmed_R2_q20_fastqc.html
2020-11-24 21:52
240K
CHM13_Input_2_trimmed_R1_q20_fastqc.html
2020-11-24 21:52
236K
CHM13_Input_2_singles_q20_fastqc.html
2020-11-24 21:52
258K
CHM13_Input_1_trimmed_R2_q20_fastqc.html
2020-11-24 21:52
240K
CHM13_Input_1_trimmed_R1_q20_fastqc.html
2020-11-24 21:52
242K
CHM13_Input_1_singles_q20_fastqc.html
2020-11-24 21:52
256K
CHM13_CA_ChIP_2_trimmed_R1_q20_fastqc.html
2020-11-24 21:52
257K
CHM13_CA_ChIP_1_trimmed_R1_q20_fastqc.html
2020-11-24 21:52
253K
HOR5.bwamem.150bp.bam.bai
2020-11-13 13:20
79K
HOR5.bwamem.150bp.bam
2020-11-13 13:20
6.0M
HOR4.bwamem.150bp.bam.bai
2020-11-13 13:20
79K
HOR4.bwamem.150bp.bam
2020-11-13 13:20
6.2M
HOR3.bwamem.150bp.bam.bai
2020-11-13 13:20
79K
HOR3.bwamem.150bp.bam
2020-11-13 13:20
6.1M
HOR2.bwamem.150bp.bam.bai
2020-11-13 13:20
79K
HOR2.bwamem.150bp.bam
2020-11-13 13:20
6.2M
HOR1.bwamem.150bp.bam.bai
2020-11-13 13:20
1.1M
HOR1.bwamem.150bp.bam
2020-11-13 13:20
6.0M
HOR5.bwamem.150bp.1kbpbins.bw
2020-11-13 11:37
601K
HOR4.bwamem.150bp.1kbpbins.bw
2020-11-13 11:37
601K
HOR3.bwamem.150bp.1kbpbins.bw
2020-11-13 11:37
601K
HOR2.bwamem.150bp.1kbpbins.bw
2020-11-13 11:37
601K
HOR1.bwamem.150bp.1kbpbins.bw
2020-11-13 11:37
606K
HOR1.bwamem.bw
2020-11-13 10:53
777K
HOR1.bwamem.1kbpbins.bw
2020-11-13 08:35
607K
chr8_reg2.ratio.RPKM.1kbp.bw
2020-11-13 08:02
907K
chr8_reg2.ratio.readcount.1kbp.bw
2020-11-13 08:02
904K
chr8_reg2.ratio.1kbp.bw
2020-11-13 08:02
904K
chr8_hor6.ratio.1kbp.bw
2020-11-13 08:02
891K
chr8_hor5.ratio.1kbp.bw
2020-11-13 08:02
891K
chr8_hor4.ratio.1kbp.bw
2020-11-13 08:02
891K
chr8_hor3.ratio.1kbp.bw
2020-11-13 08:02
891K
chr8_hor2.ratio.1kbp.bw
2020-11-13 08:02
891K
chr8_hor1.ratio.RPKM.1kbp.bw
2020-11-13 08:02
899K
chr8_hor1.ratio.readcount.1kbp.bw
2020-11-13 08:02
899K
chr8_hor1.ratio.1kbp.bw
2020-11-13 08:02
899K
HOR5.bwamem.500bp.bw
2020-10-29 13:00
2.0M
HOR5.bwamem.5000bp.bw
2020-10-29 13:00
1.2M
HOR5.bwamem.2000bp.bw
2020-10-29 13:00
1.3M
HOR5.bwamem.100bp.bw
2020-10-29 13:00
2.6M
HOR5.bwamem.1000bp.bw
2020-10-29 13:00
1.5M
MS4221_CAvsInput_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-10-23 15:51
615K
IMS13q_CAvsInput_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-10-23 15:51
619K
MS4221_CAvsInput_85.9-87.15Mbp.readcount.ratio.1kbp.bw
2020-10-23 11:03
669K
MS4221_Input.glchr8v9_43.6-47.2Mbp.bam.bai
2020-10-23 11:02
82K
MS4221_Input.glchr8v9_43.6-47.2Mbp.bam
2020-10-23 11:02
14M
MS4221_CA.glchr8v9_43.6-47.2Mbp.bam.bai
2020-10-23 11:02
81K
MS4221_CA.glchr8v9_43.6-47.2Mbp.bam
2020-10-23 11:02
5.1M
IMS13q_CA.glchr8v9_43.6-47.2Mbp.bam.bai
2020-10-23 11:02
84K
IMS13q_CA.glchr8v9_43.6-47.2Mbp.bam
2020-10-23 11:02
277M
IMS13q_Input.glchr8v9_43.6-47.2Mbp.bam.bai
2020-10-23 11:01
81K
IMS13q_Input.glchr8v9_43.6-47.2Mbp.bam
2020-10-23 11:01
13M
HOR5.bam.bai
2020-09-15 16:23
104K
HOR5.bam
2020-09-15 16:23
7.0M
HOR4.bam.bai
2020-09-15 16:23
104K
HOR4.bam
2020-09-15 16:23
7.3M
HOR3.bam.bai
2020-09-15 16:23
104K
HOR3.bam
2020-09-15 16:23
7.2M
HOR2.bam.bai
2020-09-15 16:23
104K
HOR2.bam
2020-09-15 16:23
7.2M
HOR1.bam.bai
2020-09-15 16:23
1.2M
HOR1.bam
2020-09-15 16:23
7.0M
HOR5.bed
2020-09-15 15:45
1.4M
HOR4.bed
2020-09-15 15:45
1.4M
HOR3.bed
2020-09-15 15:45
1.4M
HOR2.bed
2020-09-15 15:45
1.4M
HOR1.bed
2020-09-15 15:45
1.3M
forAllah/
2020-09-04 07:41
-
PDNC4_CA.glchr8v9_43.6-47.2Mbp.bam.bai
2020-08-30 22:11
86K
PDNC4_CA.glchr8v9_43.6-47.2Mbp.bam
2020-08-30 22:11
275M
HuRef_X_CAvsInput_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-08-26 22:18
615K
RPE1_CAvsIgG_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-08-26 22:08
618K
PDNC4_CAvsInput_43.6-47.2Mbp.readcount.ratio.1kbp.bw
2020-08-26 22:08
619K
MS4221_CAvsInput.RPKM.bw
2020-08-26 22:08
289M
MS4221_CAvsInput.RPKM.bin10.bw
2020-08-26 22:08
699M
MS4221_CAvsInput.readcount.subtract.bw
2020-08-26 22:08
289M
MS4221_CAvsInput.readcount.ratio.bw
2020-08-26 22:08
288M
MS4221_CAvsInput.readcount.notscaled.bw
2020-08-26 22:08
15M
MS4221_CAvsInput.readcount.log2.bin10.bw
2020-08-26 22:08
701M
MS4221_CAvsInput.readcount.glchr8v9.bedgraph
2020-08-26 22:08
83M
MS4221_CAvsInput.readcount.bw
2020-08-26 22:08
289M
MS4221_CAvsInput.readcount.bedgraph
2020-08-26 22:08
1.8G
MS4221_CAvsInput_HOR.readcount.subtract.bw
2020-08-26 22:08
799K
MS4221_CAvsInput_HOR.readcount.subtract.bin1kbp.bw
2020-08-26 22:08
605K
MS4221_CAvsInput_HOR.readcount.ratio.bw
2020-08-26 22:08
869K
MS4221_CAvsInput_HOR.readcount.ratio.bin1kbp.bw
2020-08-26 22:08
676K
MS4221_CAvsInput_HOR.readcount.log2ratio.bw
2020-08-26 22:08
798K
MS4221_CAvsInput_HOR.readcount.log2ratio.bin1kbp.bw
2020-08-26 22:08
606K
MS4221_CAvsInput_43.6-47.2Mbp.readcount.subtract.bw
2020-08-26 22:08
924K
MS4221_CAvsInput_43.6-47.2Mbp.readcount.ratio.bw
2020-08-26 22:08
1.0M
MS4221_CAvsInput_43.6-47.2Mbp.readcount.ratio.200bp.bw
2020-08-26 22:08
830K
MS4221_CAvsInput_43.6-47.2Mbp.readcount.log2ratio.bw
2020-08-26 22:08
923K
cenSat/
2020-03-18 14:54
-